RNA–Protein interactions for RNA: YPR178W

PRP4, Transcript of Splicing factor, yeastyeast

Gene PRP4, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP4YPR178W SNF7P39929 240 aaKnown RBP12.85□□□□□ -0.35
PRP4YPR178W TRK1P12685 1235 aa12.84□□□□□ -0.35
PRP4YPR178W CHZ1P40019 153 aaPredicted RBP12.84□□□□□ -0.35
PRP4YPR178W NUP188P52593 1655 aaKnown RBP12.84□□□□□ -0.35
PRP4YPR178W DNF2Q12675 1612 aa12.83□□□□□ -0.35
PRP4YPR178W YEF3P16521 1044 aaKnown RBP12.83□□□□□ -0.36
PRP4YPR178W YAP3P38749 330 aa12.83□□□□□ -0.36
PRP4YPR178W MPP10P47083 593 aaKnown RBP12.81□□□□□ -0.36
PRP4YPR178W TAF8Q03750 510 aa12.81□□□□□ -0.36
PRP4YPR178W RAD2P07276 1031 aa12.8□□□□□ -0.36
PRP4YPR178W TRM3Q07527 1436 aa12.78□□□□□ -0.36
PRP4YPR178W ALD4P46367 519 aaKnown RBP12.77□□□□□ -0.37
PRP4YPR178W ROX1P25042 368 aa12.75□□□□□ -0.37
PRP4YPR178W NAP1P25293 417 aaKnown RBP12.74□□□□□ -0.37
PRP4YPR178W BUD27P43573 796 aaKnown RBP RIP-Chip data12.74□□□□□ -0.37not detected
PRP4YPR178W RTR1P40084 226 aaPredicted RBP12.73□□□□□ -0.37
PRP4YPR178W BCK1Q01389 1478 aa12.73□□□□□ -0.37
PRP4YPR178W SAP155P43612 1002 aa12.72□□□□□ -0.37
PRP4YPR178W MNN4P36044 1178 aa12.71□□□□□ -0.37
PRP4YPR178W RAD9P14737 1309 aa12.71□□□□□ -0.38
PRP4YPR178W MLP1Q02455 1875 aaKnown RBP12.71□□□□□ -0.38
PRP4YPR178W PCT1P13259 424 aa12.7□□□□□ -0.38
PRP4YPR178W TCB2P48231 1178 aa12.7□□□□□ -0.38
PRP4YPR178W SNF2P22082 1703 aa12.7□□□□□ -0.38
PRP4YPR178W RRP46P53256 223 aaPredicted RBP12.69□□□□□ -0.38
PRP4YPR178W KRE5P22023 1365 aa12.69□□□□□ -0.38
PRP4YPR178W IPL1P38991 367 aa12.69□□□□□ -0.38
PRP4YPR178W TYS1P36421 394 aaKnown RBP12.68□□□□□ -0.38
PRP4YPR178W YIL092WP40497 633 aa12.68□□□□□ -0.38
PRP4YPR178W URN1Q06525 465 aaKnown RBP12.68□□□□□ -0.38
PRP4YPR178W YML133CQ03099 1374 aa12.67□□□□□ -0.38
PRP4YPR178W YLL067CQ07888 1374 aa12.67□□□□□ -0.38
PRP4YPR178W YLL066CQ99208 1374 aa12.67□□□□□ -0.38
PRP4YPR178W VPS24P36095 224 aaKnown RBP12.66□□□□□ -0.38
PRP4YPR178W DAL5P15365 543 aa12.65□□□□□ -0.38
PRP4YPR178W TPD3P31383 635 aa12.65□□□□□ -0.38
PRP4YPR178W POL32P47110 350 aa12.65□□□□□ -0.38
PRP4YPR178W THI22Q06490 572 aa12.63□□□□□ -0.39
PRP4YPR178W HAP1P0CE41 1502 aa12.63□□□□□ -0.39
PRP4YPR178W KAR2P16474 682 aaKnown RBP12.62□□□□□ -0.39
PRP4YPR178W PRD1P25375 712 aa12.62□□□□□ -0.39
PRP4YPR178W SLN1P39928 1220 aaPredicted RBP12.61□□□□□ -0.39
PRP4YPR178W DJP1P40564 432 aa12.61□□□□□ -0.39
PRP4YPR178W CAB1Q04430 367 aa12.61□□□□□ -0.39
PRP4YPR178W YRF1-4O13559 1382 aa12.61□□□□□ -0.39
PRP4YPR178W SIR4P11978 1358 aa12.61□□□□□ -0.39
PRP4YPR178W HEF3P53978 1044 aaKnown RBP12.6□□□□□ -0.39
PRP4YPR178W MSP1P28737 362 aa12.59□□□□□ -0.39
PRP4YPR178W TAP42Q04372 366 aa12.59□□□□□ -0.39
PRP4YPR178W LSP1Q12230 341 aaKnown RBP12.59□□□□□ -0.39
PRP4YPR178W MAK21Q12176 1025 aaKnown RBP12.58□□□□□ -0.4
PRP4YPR178W EDE1P34216 1381 aa12.55□□□□□ -0.4
PRP4YPR178W PAP2P53632 584 aaKnown RBP12.54□□□□□ -0.4
PRP4YPR178W PUF6Q04373 656 aaKnown RBP12.54□□□□□ -0.4
PRP4YPR178W PSK1P31374 1356 aa12.53□□□□□ -0.4
PRP4YPR178W CSE4P36012 229 aa12.53□□□□□ -0.4
PRP4YPR178W PDI1P17967 522 aaKnown RBP12.52□□□□□ -0.41
PRP4YPR178W RTT109Q07794 436 aa12.52□□□□□ -0.41
PRP4YPR178W NOT3P06102 836 aaKnown RBP12.51□□□□□ -0.41
PRP4YPR178W ARL1P38116 183 aaKnown RBP12.51□□□□□ -0.41
PRP4YPR178W GRX4P32642 244 aa12.49□□□□□ -0.41
PRP4YPR178W ECM16Q04217 1267 aaKnown RBP12.49□□□□□ -0.41
PRP4YPR178W HIM1Q06674 414 aa12.48□□□□□ -0.41
PRP4YPR178W RLF2Q12495 606 aa12.48□□□□□ -0.41
PRP4YPR178W RTF1P53064 558 aa12.47□□□□□ -0.41
PRP4YPR178W DNF3Q12674 1656 aa12.46□□□□□ -0.42
PRP4YPR178W TEA1P47988 759 aa12.45□□□□□ -0.42
PRP4YPR178W ITC1P53125 1264 aa12.45□□□□□ -0.42
PRP4YPR178W RCM1P53972 490 aa12.44□□□□□ -0.42
PRP4YPR178W AUS1Q08409 1394 aa12.44□□□□□ -0.42
PRP4YPR178W LEU2P04173 364 aaPredicted RBP12.43□□□□□ -0.42
PRP4YPR178W MRX12P47084 519 aa12.43□□□□□ -0.42
PRP4YPR178W KNS1P32350 737 aaPredicted RBP12.43□□□□□ -0.42
PRP4YPR178W PPH3P32345 308 aa12.42□□□□□ -0.42
PRP4YPR178W TRP5P00931 707 aaKnown RBP12.41□□□□□ -0.42
PRP4YPR178W SRS2P12954 1174 aa12.4□□□□□ -0.42
PRP4YPR178W LEO1P38439 464 aa12.4□□□□□ -0.42
PRP4YPR178W MTR4P47047 1073 aaKnown RBP12.4□□□□□ -0.42
PRP4YPR178W COG8Q04632 607 aa12.4□□□□□ -0.42
PRP4YPR178W CTR9P89105 1077 aa12.38□□□□□ -0.43
PRP4YPR178W RPO41P13433 1351 aaKnown RBP12.37□□□□□ -0.43
PRP4YPR178W HAP5Q02516 242 aa12.37□□□□□ -0.43
PRP4YPR178W GYP7P48365 746 aa12.35□□□□□ -0.43
PRP4YPR178W RAD50P12753 1312 aa12.35□□□□□ -0.43
PRP4YPR178W NKP2Q06162 153 aa12.34□□□□□ -0.43
PRP4YPR178W NUP145P49687 1317 aa12.34□□□□□ -0.43
PRP4YPR178W DLD1P32891 587 aa12.32□□□□□ -0.44
PRP4YPR178W PIL1P53252 339 aaKnown RBP12.32□□□□□ -0.44
PRP4YPR178W RIA1P53893 1110 aa12.31□□□□□ -0.44
PRP4YPR178W GCR2Q01722 534 aa12.31□□□□□ -0.44
PRP4YPR178W LCD1Q04377 747 aa12.31□□□□□ -0.44
PRP4YPR178W NOP58Q12499 511 aaKnown RBP12.31□□□□□ -0.44
PRP4YPR178W QCR6P00127 147 aa12.3□□□□□ -0.44
PRP4YPR178W CPS1P27614 576 aa12.3□□□□□ -0.44
PRP4YPR178W DSD1P53095 428 aa12.3□□□□□ -0.44
PRP4YPR178W YNL050CP53952 270 aa12.3□□□□□ -0.44
PRP4YPR178W AKL1P38080 1108 aaKnown RBP12.3□□□□□ -0.44
PRP4YPR178W YNG2P38806 282 aaKnown RBP12.3□□□□□ -0.44
PRP4YPR178W MAM1P40065 302 aa12.3□□□□□ -0.44
PRP4YPR178W YPP1P46951 817 aa12.3□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms