RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C TY1A-HP0C2I4 478 aaKnown RBP8.08□□□□□ -1.12
CCL1YPR025C TY1A-AP0CX57 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-PR1P0CX58 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-ORP0CX59 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-PR2P0CX60 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-DR5P0CX65 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-ER2P0CX66 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-GR3P0CX67 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-LR1P0CX68 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-MR2P0CX69 440 aa8.08□□□□□ -1.12
CCL1YPR025C CKB1P43639 278 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-JR2P47099 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-DR1Q03856 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-ML1Q04706 440 aaKnown RBP8.08□□□□□ -1.12
CCL1YPR025C TY1A-BRQ12217 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-NL2Q12470 440 aa8.08□□□□□ -1.12
CCL1YPR025C TY1A-GR2Q12485 440 aa8.08□□□□□ -1.12
CCL1YPR025C SEC2P17065 759 aa8.05□□□□□ -1.12
CCL1YPR025C SPB4P25808 606 aaPredicted RBP8.05□□□□□ -1.12
CCL1YPR025C BDP1P46678 594 aa8.05□□□□□ -1.12
CCL1YPR025C RRN7P40992 514 aa8.02□□□□□ -1.13
CCL1YPR025C YDR444WQ04093 687 aa8.02□□□□□ -1.13
CCL1YPR025C HED1Q03937 162 aa8□□□□□ -1.13
CCL1YPR025C PAT1P25644 796 aaKnown RBP7.99□□□□□ -1.13
CCL1YPR025C LEU3P08638 886 aa7.97□□□□□ -1.13
CCL1YPR025C ORC6P38826 435 aa7.97□□□□□ -1.13
CCL1YPR025C REF2P42073 533 aaPredicted RBP7.97□□□□□ -1.13
CCL1YPR025C PBS2P08018 668 aa7.96□□□□□ -1.14
CCL1YPR025C LCB5Q06147 687 aaKnown RBP7.94□□□□□ -1.14
CCL1YPR025C YDL176WQ12027 708 aa7.92□□□□□ -1.14
CCL1YPR025C LEO1P38439 464 aa7.91□□□□□ -1.14
CCL1YPR025C ASH1P34233 588 aa7.9□□□□□ -1.14
CCL1YPR025C DSF2P38213 736 aa7.9□□□□□ -1.14
CCL1YPR025C MVP1P40959 511 aaKnown RBP7.89□□□□□ -1.15
CCL1YPR025C MET32Q12041 191 aa7.88□□□□□ -1.15
CCL1YPR025C HST3P53687 447 aa7.87□□□□□ -1.15
CCL1YPR025C AFT1P22149 690 aa7.86□□□□□ -1.15
CCL1YPR025C YPR109WQ06104 294 aa7.85□□□□□ -1.15
CCL1YPR025C MAM3Q12296 706 aa7.85□□□□□ -1.15
CCL1YPR025C COX6P00427 148 aa7.84□□□□□ -1.15
CCL1YPR025C MAK21Q12176 1025 aaKnown RBP7.84□□□□□ -1.15
CCL1YPR025C KEX2P13134 814 aa7.82□□□□□ -1.16
CCL1YPR025C RRD1P40454 393 aaKnown RBP7.82□□□□□ -1.16
CCL1YPR025C RPN1P38764 993 aaKnown RBP7.81□□□□□ -1.16
CCL1YPR025C RGR1P19263 1082 aa7.8□□□□□ -1.16
CCL1YPR025C IES2P40154 320 aa7.8□□□□□ -1.16
CCL1YPR025C ERF2Q06551 359 aa7.8□□□□□ -1.16
CCL1YPR025C PAC1P39946 494 aaKnown RBP7.79□□□□□ -1.16
CCL1YPR025C PUS5Q06244 254 aa7.78□□□□□ -1.16
CCL1YPR025C MOD5P07884 428 aa7.77□□□□□ -1.17
CCL1YPR025C DIT2P21595 489 aa7.76□□□□□ -1.17
CCL1YPR025C YJR115WP47152 169 aa7.76□□□□□ -1.17
CCL1YPR025C NUP42P49686 430 aaKnown RBP7.75□□□□□ -1.17
CCL1YPR025C MTC5Q03897 1148 aa7.75□□□□□ -1.17
CCL1YPR025C YNR021WP53723 404 aaKnown RBP7.72□□□□□ -1.17
CCL1YPR025C CAF120P53836 1060 aa7.71□□□□□ -1.18
CCL1YPR025C GLC3P32775 704 aa7.69□□□□□ -1.18
CCL1YPR025C AGE1Q04412 482 aa7.69□□□□□ -1.18
CCL1YPR025C TUB4P53378 473 aa7.68□□□□□ -1.18
CCL1YPR025C MSB3P48566 633 aaPredicted RBP7.65□□□□□ -1.18
CCL1YPR025C ATF2P53296 535 aa7.65□□□□□ -1.18
CCL1YPR025C KIN1P13185 1064 aa7.63□□□□□ -1.19
CCL1YPR025C ACO2P39533 789 aa7.63□□□□□ -1.19
CCL1YPR025C AIM7Q12156 149 aa7.62□□□□□ -1.19
CCL1YPR025C PSE1P32337 1089 aaKnown RBP7.61□□□□□ -1.19
CCL1YPR025C TRK2P28584 889 aa7.6□□□□□ -1.19
CCL1YPR025C YGR035CP53222 116 aa7.59□□□□□ -1.19
CCL1YPR025C OPT2Q06593 877 aa7.59□□□□□ -1.19
CCL1YPR025C RTF1P53064 558 aa7.58□□□□□ -1.2
CCL1YPR025C YLR346CQ06139 101 aa7.58□□□□□ -1.2
CCL1YPR025C UGA3P26370 528 aa7.57□□□□□ -1.2
CCL1YPR025C KXD1P53158 218 aa7.57□□□□□ -1.2
CCL1YPR025C SYH1Q02875 849 aaKnown RBP7.57□□□□□ -1.2
CCL1YPR025C SRF1Q12516 437 aa7.57□□□□□ -1.2
CCL1YPR025C CLB5P30283 435 aa7.56□□□□□ -1.2
CCL1YPR025C PTK2P47116 818 aaKnown RBP7.56□□□□□ -1.2
CCL1YPR025C TPD3P31383 635 aa7.54□□□□□ -1.2
CCL1YPR025C YNL115CP53925 644 aa7.54□□□□□ -1.2
CCL1YPR025C TEA1P47988 759 aa7.53□□□□□ -1.2
CCL1YPR025C HXT10P43581 546 aa7.51□□□□□ -1.21
CCL1YPR025C DMA2P53924 522 aa7.51□□□□□ -1.21
CCL1YPR025C YIR007WP40566 764 aa7.5□□□□□ -1.21
CCL1YPR025C HPF1Q05164 967 aa7.5□□□□□ -1.21
CCL1YPR025C GLY1P37303 387 aaKnown RBP7.49□□□□□ -1.21
CCL1YPR025C GUA1P38625 525 aaKnown RBP7.48□□□□□ -1.21
CCL1YPR025C TYW1Q08960 810 aaKnown RBP7.48□□□□□ -1.21
CCL1YPR025C PDC1P06169 563 aaKnown RBP7.47□□□□□ -1.21
CCL1YPR025C SCW11P53189 542 aa7.47□□□□□ -1.21
CCL1YPR025C NUP85P46673 744 aa7.45□□□□□ -1.22
CCL1YPR025C MIP1P15801 1254 aa7.44□□□□□ -1.22
CCL1YPR025C KIP2P28743 706 aa7.44□□□□□ -1.22
CCL1YPR025C CSN12P47130 423 aa7.44□□□□□ -1.22
CCL1YPR025C SIT4P20604 311 aa7.43□□□□□ -1.22
CCL1YPR025C TAF7Q05021 590 aa7.43□□□□□ -1.22
CCL1YPR025C TY1A-BLQ12266 440 aa7.43□□□□□ -1.22
CCL1YPR025C NIS1P53939 407 aa7.42□□□□□ -1.22
CCL1YPR025C FPK1P53739 893 aa7.4□□□□□ -1.22
CCL1YPR025C YMR196WQ04336 1088 aa7.4□□□□□ -1.22
CCL1YPR025C IXR1P33417 597 aa7.39□□□□□ -1.23
CCL1YPR025C YPR204WQ08995 1032 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms