RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C TBF1Q02457 562 aa3.71□□□□□ -1.82
NIP100YPL174C STR2P47164 639 aa3.7□□□□□ -1.82
NIP100YPL174C GAP1P19145 602 aaPredicted RBP3.7□□□□□ -1.82
NIP100YPL174C BUD20Q08004 166 aaPredicted RBP3.7□□□□□ -1.82
NIP100YPL174C RAM1P22007 431 aa3.69□□□□□ -1.82
NIP100YPL174C SLY41P22215 453 aa3.68□□□□□ -1.82
NIP100YPL174C FRK1Q03002 865 aaPredicted RBP3.68□□□□□ -1.82
NIP100YPL174C YNL115CP53925 644 aa3.66□□□□□ -1.82
NIP100YPL174C AMS1P22855 1083 aa3.66□□□□□ -1.82
NIP100YPL174C MMP1Q12372 583 aa3.66□□□□□ -1.82
NIP100YPL174C RPN1P38764 993 aaKnown RBP3.65□□□□□ -1.82
NIP100YPL174C KXD1P53158 218 aa3.65□□□□□ -1.82
NIP100YPL174C NIS1P53939 407 aa3.65□□□□□ -1.82
NIP100YPL174C ERF2Q06551 359 aa3.65□□□□□ -1.82
NIP100YPL174C LEU3P08638 886 aa3.65□□□□□ -1.83
NIP100YPL174C GLN1P32288 370 aaKnown RBP3.65□□□□□ -1.83
NIP100YPL174C FPK1P53739 893 aa3.64□□□□□ -1.83
NIP100YPL174C RTF1P53064 558 aa3.64□□□□□ -1.83
NIP100YPL174C RAS1P01119 309 aa3.63□□□□□ -1.83
NIP100YPL174C PKH3Q03306 898 aaPredicted RBP3.63□□□□□ -1.83
NIP100YPL174C KIN1P13185 1064 aa3.63□□□□□ -1.83
NIP100YPL174C TY1A-DR4O74302 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-HP0C2I4 478 aaKnown RBP3.62□□□□□ -1.83
NIP100YPL174C TY1A-AP0CX57 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-PR1P0CX58 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-ORP0CX59 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-PR2P0CX60 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-DR5P0CX65 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-ER2P0CX66 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-GR3P0CX67 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-LR1P0CX68 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-MR2P0CX69 440 aa3.62□□□□□ -1.83
NIP100YPL174C ESS1P22696 170 aa3.62□□□□□ -1.83
NIP100YPL174C SCJ1P25303 377 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-JR2P47099 440 aa3.62□□□□□ -1.83
NIP100YPL174C CSN12P47130 423 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-DR1Q03856 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-ML1Q04706 440 aaKnown RBP3.62□□□□□ -1.83
NIP100YPL174C TYW1Q08960 810 aaKnown RBP3.62□□□□□ -1.83
NIP100YPL174C AIM7Q12156 149 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-BRQ12217 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-NL2Q12470 440 aa3.62□□□□□ -1.83
NIP100YPL174C TY1A-GR2Q12485 440 aa3.62□□□□□ -1.83
NIP100YPL174C ARG8P18544 423 aa3.62□□□□□ -1.83
NIP100YPL174C TUB4P53378 473 aa3.62□□□□□ -1.83
NIP100YPL174C SEC2P17065 759 aa3.6□□□□□ -1.83
NIP100YPL174C PAC1P39946 494 aaKnown RBP3.6□□□□□ -1.83
NIP100YPL174C PUS6P53294 404 aa3.6□□□□□ -1.83
NIP100YPL174C KIP2P28743 706 aa3.6□□□□□ -1.83
NIP100YPL174C ALR1Q08269 859 aa3.6□□□□□ -1.83
NIP100YPL174C SSA2P10592 639 aaKnown RBP3.59□□□□□ -1.83
NIP100YPL174C TRK1P12685 1235 aa3.59□□□□□ -1.83
NIP100YPL174C HST2P53686 357 aa3.59□□□□□ -1.83
NIP100YPL174C YDL206WQ12424 762 aa3.59□□□□□ -1.83
NIP100YPL174C TRM1P15565 570 aaKnown RBP3.59□□□□□ -1.83
NIP100YPL174C BDP1P46678 594 aa3.59□□□□□ -1.83
NIP100YPL174C SIT4P20604 311 aa3.58□□□□□ -1.84
NIP100YPL174C GBP2P25555 427 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
NIP100YPL174C CST6P40535 587 aa3.58□□□□□ -1.84
NIP100YPL174C PUS5Q06244 254 aa3.58□□□□□ -1.84
NIP100YPL174C LAM6Q08001 693 aa3.58□□□□□ -1.84
NIP100YPL174C HGH1P48362 394 aaKnown RBP3.57□□□□□ -1.84
NIP100YPL174C YJU3P28321 313 aa3.57□□□□□ -1.84
NIP100YPL174C HST3P53687 447 aa3.57□□□□□ -1.84
NIP100YPL174C GCR2Q01722 534 aa3.57□□□□□ -1.84
NIP100YPL174C BRL1P38770 471 aa3.57□□□□□ -1.84
NIP100YPL174C SDH2P21801 266 aa3.56□□□□□ -1.84
NIP100YPL174C IXR1P33417 597 aa3.56□□□□□ -1.84
NIP100YPL174C RPA14P50106 137 aa3.55□□□□□ -1.84
NIP100YPL174C SYH1Q02875 849 aaKnown RBP3.55□□□□□ -1.84
NIP100YPL174C PDC1P06169 563 aaKnown RBP3.54□□□□□ -1.84
NIP100YPL174C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
NIP100YPL174C HXT10P43581 546 aa3.54□□□□□ -1.84
NIP100YPL174C YBL036CP38197 257 aa3.54□□□□□ -1.84
NIP100YPL174C CLA4P48562 842 aa3.54□□□□□ -1.84
NIP100YPL174C RAD59Q12223 238 aa3.54□□□□□ -1.84
NIP100YPL174C SRF1Q12516 437 aa3.54□□□□□ -1.84
NIP100YPL174C CDC4P07834 779 aa3.53□□□□□ -1.84
NIP100YPL174C AIR1P40507 360 aaKnown RBP3.53□□□□□ -1.84
NIP100YPL174C HED1Q03937 162 aa3.53□□□□□ -1.84
NIP100YPL174C AGE1Q04412 482 aa3.53□□□□□ -1.84
NIP100YPL174C BRE2P43132 505 aa3.53□□□□□ -1.84
NIP100YPL174C RRD1P40454 393 aaKnown RBP3.52□□□□□ -1.85
NIP100YPL174C YPR097WQ06839 1073 aa3.52□□□□□ -1.85
NIP100YPL174C UGA3P26370 528 aa3.51□□□□□ -1.85
NIP100YPL174C GUA1P38625 525 aaKnown RBP3.51□□□□□ -1.85
NIP100YPL174C KTR1P27810 393 aaKnown RBP3.51□□□□□ -1.85
NIP100YPL174C ASH1P34233 588 aa3.51□□□□□ -1.85
NIP100YPL174C GAR1P28007 205 aaKnown RBP3.5□□□□□ -1.85
NIP100YPL174C RPL34BP40525 121 aaKnown RBP3.5□□□□□ -1.85
NIP100YPL174C TEC1P18412 486 aa3.48□□□□□ -1.85
NIP100YPL174C TFB3Q03290 321 aa3.48□□□□□ -1.85
NIP100YPL174C SRC1Q03707 834 aa3.48□□□□□ -1.85
NIP100YPL174C MOD5P07884 428 aa3.48□□□□□ -1.85
NIP100YPL174C GUT2P32191 649 aa3.46□□□□□ -1.86
NIP100YPL174C LEO1P38439 464 aa3.46□□□□□ -1.86
NIP100YPL174C APP1P53933 587 aa3.46□□□□□ -1.86
NIP100YPL174C HPC2Q01448 625 aa3.46□□□□□ -1.86
NIP100YPL174C TPD3P31383 635 aa3.46□□□□□ -1.86
NIP100YPL174C YJL007CP47080 104 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms