RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TY1A-NL2Q12470 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-GR2Q12485 440 aa4.36□□□□□ -1.71
SGF11YPL047W NPL4P33755 580 aa4.35□□□□□ -1.71
SGF11YPL047W ORC6P38826 435 aa4.35□□□□□ -1.71
SGF11YPL047W REF2P42073 533 aaPredicted RBP4.35□□□□□ -1.71
SGF11YPL047W LAM6Q08001 693 aa4.35□□□□□ -1.71
SGF11YPL047W GAR1P28007 205 aaKnown RBP4.34□□□□□ -1.71
SGF11YPL047W SPT16P32558 1035 aaKnown RBP4.34□□□□□ -1.71
SGF11YPL047W FRK1Q03002 865 aaPredicted RBP4.34□□□□□ -1.71
SGF11YPL047W GCR2Q01722 534 aa4.33□□□□□ -1.72
SGF11YPL047W YPR148CQ06523 435 aa4.32□□□□□ -1.72
SGF11YPL047W BDP1P46678 594 aa4.31□□□□□ -1.72
SGF11YPL047W GBP2P25555 427 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SGF11YPL047W MVP1P40959 511 aaKnown RBP4.3□□□□□ -1.72
SGF11YPL047W RRN7P40992 514 aa4.3□□□□□ -1.72
SGF11YPL047W CDC4P07834 779 aa4.29□□□□□ -1.72
SGF11YPL047W YPR109WQ06104 294 aa4.29□□□□□ -1.72
SGF11YPL047W COX6P00427 148 aa4.28□□□□□ -1.72
SGF11YPL047W VPS70P47161 811 aa4.28□□□□□ -1.72
SGF11YPL047W RGR1P19263 1082 aa4.27□□□□□ -1.73
SGF11YPL047W PAT1P25644 796 aaKnown RBP4.26□□□□□ -1.73
SGF11YPL047W MET22P32179 357 aa4.26□□□□□ -1.73
SGF11YPL047W ERF2Q06551 359 aa4.26□□□□□ -1.73
SGF11YPL047W MAK21Q12176 1025 aaKnown RBP4.26□□□□□ -1.73
SGF11YPL047W KEX2P13134 814 aa4.25□□□□□ -1.73
SGF11YPL047W HED1Q03937 162 aa4.25□□□□□ -1.73
SGF11YPL047W ENV9Q08651 330 aa4.23□□□□□ -1.73
SGF11YPL047W PAC1P39946 494 aaKnown RBP4.22□□□□□ -1.73
SGF11YPL047W YDR444WQ04093 687 aa4.21□□□□□ -1.74
SGF11YPL047W MET32Q12041 191 aa4.21□□□□□ -1.74
SGF11YPL047W MOD5P07884 428 aa4.2□□□□□ -1.74
SGF11YPL047W ASH1P34233 588 aa4.2□□□□□ -1.74
SGF11YPL047W PUS5Q06244 254 aa4.2□□□□□ -1.74
SGF11YPL047W AGE1Q04412 482 aa4.18□□□□□ -1.74
SGF11YPL047W AFT1P22149 690 aa4.17□□□□□ -1.74
SGF11YPL047W TUB4P53378 473 aa4.17□□□□□ -1.74
SGF11YPL047W LCB5Q06147 687 aaKnown RBP4.17□□□□□ -1.74
SGF11YPL047W CKB1P43639 278 aa4.16□□□□□ -1.74
SGF11YPL047W HST3P53687 447 aa4.16□□□□□ -1.74
SGF11YPL047W YDL176WQ12027 708 aa4.16□□□□□ -1.74
SGF11YPL047W PBS2P08018 668 aa4.15□□□□□ -1.75
SGF11YPL047W PSE1P32337 1089 aaKnown RBP4.14□□□□□ -1.75
SGF11YPL047W RRD1P40454 393 aaKnown RBP4.13□□□□□ -1.75
SGF11YPL047W YJR115WP47152 169 aa4.13□□□□□ -1.75
SGF11YPL047W CLB5P30283 435 aa4.11□□□□□ -1.75
SGF11YPL047W YNL115CP53925 644 aa4.11□□□□□ -1.75
SGF11YPL047W RTF1P53064 558 aa4.1□□□□□ -1.75
SGF11YPL047W MAM3Q12296 706 aa4.1□□□□□ -1.75
SGF11YPL047W SIT4P20604 311 aa4.09□□□□□ -1.75
SGF11YPL047W KXD1P53158 218 aa4.09□□□□□ -1.75
SGF11YPL047W IES2P40154 320 aa4.07□□□□□ -1.76
SGF11YPL047W HXT10P43581 546 aa4.07□□□□□ -1.76
SGF11YPL047W MSB3P48566 633 aaPredicted RBP4.07□□□□□ -1.76
SGF11YPL047W CAF120P53836 1060 aa4.07□□□□□ -1.76
SGF11YPL047W NIS1P53939 407 aa4.07□□□□□ -1.76
SGF11YPL047W PDC1P06169 563 aaKnown RBP4.06□□□□□ -1.76
SGF11YPL047W TPD3P31383 635 aa4.06□□□□□ -1.76
SGF11YPL047W TEA1P47988 759 aa4.06□□□□□ -1.76
SGF11YPL047W SYH1Q02875 849 aaKnown RBP4.06□□□□□ -1.76
SGF11YPL047W SLY41P22215 453 aa4.04□□□□□ -1.76
SGF11YPL047W UGA3P26370 528 aa4.04□□□□□ -1.76
SGF11YPL047W DSF2P38213 736 aa4.04□□□□□ -1.76
SGF11YPL047W PTK2P47116 818 aaKnown RBP4.04□□□□□ -1.76
SGF11YPL047W OPT2Q06593 877 aa4.04□□□□□ -1.76
SGF11YPL047W SPB4P25808 606 aaPredicted RBP4.03□□□□□ -1.76
SGF11YPL047W ACO2P39533 789 aa4.03□□□□□ -1.76
SGF11YPL047W NUP42P49686 430 aaKnown RBP4.03□□□□□ -1.76
SGF11YPL047W SRF1Q12516 437 aa4.03□□□□□ -1.76
SGF11YPL047W KIP2P28743 706 aa4.01□□□□□ -1.77
SGF11YPL047W DMA1P38823 416 aa4.01□□□□□ -1.77
SGF11YPL047W FPK1P53739 893 aa4.01□□□□□ -1.77
SGF11YPL047W YMR196WQ04336 1088 aa4.01□□□□□ -1.77
SGF11YPL047W SAS10Q12136 610 aaPredicted RBP4.01□□□□□ -1.77
SGF11YPL047W ALR1Q08269 859 aa4□□□□□ -1.77
SGF11YPL047W YDL206WQ12424 762 aa4□□□□□ -1.77
SGF11YPL047W DIT2P21595 489 aa3.99□□□□□ -1.77
SGF11YPL047W IXR1P33417 597 aa3.99□□□□□ -1.77
SGF11YPL047W YIR007WP40566 764 aa3.99□□□□□ -1.77
SGF11YPL047W RPA14P50106 137 aa3.99□□□□□ -1.77
SGF11YPL047W YLR346CQ06139 101 aa3.99□□□□□ -1.77
SGF11YPL047W SCJ1P25303 377 aa3.98□□□□□ -1.77
SGF11YPL047W TRK2P28584 889 aa3.98□□□□□ -1.77
SGF11YPL047W MRT4P33201 236 aaKnown RBP3.98□□□□□ -1.77
SGF11YPL047W PUS6P53294 404 aa3.98□□□□□ -1.77
SGF11YPL047W TBF1Q02457 562 aa3.98□□□□□ -1.77
SGF11YPL047W MTC5Q03897 1148 aa3.98□□□□□ -1.77
SGF11YPL047W YPR097WQ06839 1073 aa3.98□□□□□ -1.77
SGF11YPL047W TYW1Q08960 810 aaKnown RBP3.98□□□□□ -1.77
SGF11YPL047W TRM1P15565 570 aaKnown RBP3.97□□□□□ -1.77
SGF11YPL047W GLY1P37303 387 aaKnown RBP3.97□□□□□ -1.77
SGF11YPL047W NUP85P46673 744 aa3.97□□□□□ -1.77
SGF11YPL047W SCW11P53189 542 aa3.97□□□□□ -1.77
SGF11YPL047W YGR035CP53222 116 aa3.97□□□□□ -1.77
SGF11YPL047W HPF1Q05164 967 aa3.97□□□□□ -1.77
SGF11YPL047W TY1A-BLQ12266 440 aa3.96□□□□□ -1.78
SGF11YPL047W MIP1P15801 1254 aa3.95□□□□□ -1.78
SGF11YPL047W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SGF11YPL047W ATF2P53296 535 aa3.93□□□□□ -1.78
SGF11YPL047W HST2P53686 357 aa3.93□□□□□ -1.78
SGF11YPL047W AAD14P42884 376 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms