RNA–Protein interactions for RNA: YPL031C

PHO85, Transcript of Cyclin-dependent kinase, yeastyeast

Gene PHO85, Length 918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO85YPL031C ALD4P46367 519 aaKnown RBP9.11□□□□□ -0.95
PHO85YPL031C RTG3P38165 486 aa9.09□□□□□ -0.95
PHO85YPL031C CAB1Q04430 367 aa9.09□□□□□ -0.95
PHO85YPL031C CHZ1P40019 153 aaPredicted RBP9.08□□□□□ -0.96
PHO85YPL031C USO1P25386 1790 aa9.08□□□□□ -0.96
PHO85YPL031C NAP1P25293 417 aaKnown RBP9.06□□□□□ -0.96
PHO85YPL031C BCK1Q01389 1478 aa9.06□□□□□ -0.96
PHO85YPL031C MRX12P47084 519 aa9.02□□□□□ -0.97
PHO85YPL031C FKH1P40466 484 aa9.01□□□□□ -0.97
PHO85YPL031C FUN12P39730 1002 aaKnown RBP8.99□□□□□ -0.97
PHO85YPL031C KRE5P22023 1365 aa8.99□□□□□ -0.97
PHO85YPL031C TRK1P12685 1235 aa8.97□□□□□ -0.97
PHO85YPL031C RIA1P53893 1110 aa8.97□□□□□ -0.97
PHO85YPL031C YEF3P16521 1044 aaKnown RBP8.95□□□□□ -0.98
PHO85YPL031C RCM1P53972 490 aa8.95□□□□□ -0.98
PHO85YPL031C VPS27P40343 622 aaKnown RBP8.94□□□□□ -0.98
PHO85YPL031C YDL144CQ07589 356 aa8.94□□□□□ -0.98
PHO85YPL031C CDC45Q08032 650 aa8.94□□□□□ -0.98
PHO85YPL031C CFT1Q06632 1357 aaKnown RBP8.94□□□□□ -0.98
PHO85YPL031C RPP0P05317 312 aaKnown RBP8.93□□□□□ -0.98
PHO85YPL031C YML133CQ03099 1374 aa8.93□□□□□ -0.98
PHO85YPL031C YLL067CQ07888 1374 aa8.93□□□□□ -0.98
PHO85YPL031C YLL066CQ99208 1374 aa8.93□□□□□ -0.98
PHO85YPL031C RVB2Q12464 471 aaKnown RBP8.92□□□□□ -0.98
PHO85YPL031C HAP1P0CE41 1502 aa8.91□□□□□ -0.98
PHO85YPL031C PPH3P32345 308 aa8.91□□□□□ -0.98
PHO85YPL031C MAK10Q02197 733 aa8.91□□□□□ -0.98
PHO85YPL031C MLP1Q02455 1875 aaKnown RBP8.9□□□□□ -0.98
PHO85YPL031C RPL17AP05740 184 aaKnown RBP8.88□□□□□ -0.99
PHO85YPL031C MRPL32P25348 183 aa8.88□□□□□ -0.99
PHO85YPL031C RPL17BP46990 184 aaKnown RBP8.88□□□□□ -0.99
PHO85YPL031C MPP10P47083 593 aaKnown RBP8.88□□□□□ -0.99
PHO85YPL031C PSK1P31374 1356 aa8.87□□□□□ -0.99
PHO85YPL031C KAR2P16474 682 aaKnown RBP8.87□□□□□ -0.99
PHO85YPL031C SUI2P20459 304 aaKnown RBP8.87□□□□□ -0.99
PHO85YPL031C RTR1P40084 226 aaPredicted RBP8.86□□□□□ -0.99
PHO85YPL031C IOC4Q04213 475 aa8.86□□□□□ -0.99
PHO85YPL031C LEU2P04173 364 aaPredicted RBP8.84□□□□□ -0.99
PHO85YPL031C RRP46P53256 223 aaPredicted RBP8.84□□□□□ -0.99
PHO85YPL031C PAP2P53632 584 aaKnown RBP8.84□□□□□ -0.99
PHO85YPL031C YNR029CP53729 429 aaKnown RBP8.84□□□□□ -0.99
PHO85YPL031C PDI1P17967 522 aaKnown RBP8.83□□□□□ -1
PHO85YPL031C CPS1P27614 576 aa8.83□□□□□ -1
PHO85YPL031C FPR3P38911 411 aaKnown RBP8.83□□□□□ -1
PHO85YPL031C HIM1Q06674 414 aa8.83□□□□□ -1
PHO85YPL031C TFA1P36100 482 aa8.82□□□□□ -1
PHO85YPL031C SNF2P22082 1703 aa8.81□□□□□ -1
PHO85YPL031C REB1P21538 810 aa8.81□□□□□ -1
PHO85YPL031C RTF1P53064 558 aa8.81□□□□□ -1
PHO85YPL031C TAP42Q04372 366 aa8.81□□□□□ -1
PHO85YPL031C SAP155P43612 1002 aa8.8□□□□□ -1
PHO85YPL031C MTR4P47047 1073 aaKnown RBP8.8□□□□□ -1
PHO85YPL031C YRB30P53107 440 aaPredicted RBP8.8□□□□□ -1
PHO85YPL031C TPD3P31383 635 aa8.79□□□□□ -1
PHO85YPL031C AUS1Q08409 1394 aa8.78□□□□□ -1
PHO85YPL031C RPS24AP0CX31 135 aaKnown RBP8.78□□□□□ -1
PHO85YPL031C RPS24BP0CX32 135 aaKnown RBP8.78□□□□□ -1
PHO85YPL031C RPC31P17890 251 aa8.78□□□□□ -1
PHO85YPL031C CSE4P36012 229 aa8.78□□□□□ -1
PHO85YPL031C PRD1P25375 712 aa8.77□□□□□ -1.01
PHO85YPL031C GRX4P32642 244 aa8.77□□□□□ -1.01
PHO85YPL031C THI22Q06490 572 aa8.77□□□□□ -1.01
PHO85YPL031C GAS4Q08271 471 aa8.77□□□□□ -1.01
PHO85YPL031C TY1B-NL2Q99337 1749 aaKnown RBP8.77□□□□□ -1.01
PHO85YPL031C THI12P42883 340 aa8.76□□□□□ -1.01
PHO85YPL031C THI5P43534 340 aa8.76□□□□□ -1.01
PHO85YPL031C THI11P47183 340 aa8.76□□□□□ -1.01
PHO85YPL031C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
PHO85YPL031C THI13Q07748 340 aa8.76□□□□□ -1.01
PHO85YPL031C RAD2P07276 1031 aa8.74□□□□□ -1.01
PHO85YPL031C DPS1P04802 557 aaKnown RBP8.73□□□□□ -1.01
PHO85YPL031C DAL5P15365 543 aa8.73□□□□□ -1.01
PHO85YPL031C RTT109Q07794 436 aa8.73□□□□□ -1.01
PHO85YPL031C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
PHO85YPL031C HEF3P53978 1044 aaKnown RBP8.71□□□□□ -1.02
PHO85YPL031C YGL015CP33199 130 aa8.7□□□□□ -1.02
PHO85YPL031C YIL092WP40497 633 aa8.7□□□□□ -1.02
PHO85YPL031C PRP43P53131 767 aaKnown RBP8.7□□□□□ -1.02
PHO85YPL031C ADE6P38972 1358 aaKnown RBP8.7□□□□□ -1.02
PHO85YPL031C RPO41P13433 1351 aaKnown RBP8.69□□□□□ -1.02
PHO85YPL031C AKL1P38080 1108 aaKnown RBP8.67□□□□□ -1.02
PHO85YPL031C BUD27P43573 796 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
PHO85YPL031C YMR196WQ04336 1088 aa8.67□□□□□ -1.02
PHO85YPL031C POL32P47110 350 aa8.65□□□□□ -1.02
PHO85YPL031C MAK21Q12176 1025 aaKnown RBP8.65□□□□□ -1.02
PHO85YPL031C SIR4P11978 1358 aa8.64□□□□□ -1.03
PHO85YPL031C DSD1P53095 428 aa8.64□□□□□ -1.03
PHO85YPL031C YFR016CP43597 1233 aaKnown RBP8.63□□□□□ -1.03
PHO85YPL031C PUF6Q04373 656 aaKnown RBP8.63□□□□□ -1.03
PHO85YPL031C RRT14P40470 206 aa8.62□□□□□ -1.03
PHO85YPL031C YBR287WP38355 427 aa8.61□□□□□ -1.03
PHO85YPL031C GYP7P48365 746 aa8.61□□□□□ -1.03
PHO85YPL031C YRF1-4O13559 1382 aa8.61□□□□□ -1.03
PHO85YPL031C ZDS1P50111 915 aaKnown RBP8.6□□□□□ -1.03
PHO85YPL031C YNL050CP53952 270 aa8.6□□□□□ -1.03
PHO85YPL031C NTH2P35172 780 aa8.59□□□□□ -1.03
PHO85YPL031C TRP5P00931 707 aaKnown RBP8.58□□□□□ -1.04
PHO85YPL031C HSP104P31539 908 aaKnown RBP8.58□□□□□ -1.04
PHO85YPL031C IME2P32581 645 aa8.58□□□□□ -1.04
PHO85YPL031C OPY1P38271 328 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms