RNA–Protein interactions for RNA: YPL022W

RAD1, Transcript of Single-stranded DNA endonuclease (with Rad10p), yeast

Gene RAD1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD1	YPL022W	TRM3	Q07527	1436 aa		4.79	□□□□□ -1.64
RAD1	YPL022W	SPT5	P27692	1063 aa	Known RBP	4.79	□□□□□ -1.64
RAD1	YPL022W	ZUO1	P32527	433 aa	Known RBP	4.79	□□□□□ -1.64
RAD1	YPL022W	ARP5	P53946	755 aa		4.79	□□□□□ -1.64
RAD1	YPL022W	VPS30	Q02948	557 aa		4.79	□□□□□ -1.64
RAD1	YPL022W	YMR102C	Q03177	834 aa		4.79	□□□□□ -1.64
RAD1	YPL022W	RRP15	Q06511	250 aa	Predicted RBP	4.79	□□□□□ -1.64
RAD1	YPL022W	NUP170	P38181	1502 aa		4.78	□□□□□ -1.64
RAD1	YPL022W	SUP35	P05453	685 aa	Known RBP	4.78	□□□□□ -1.64
RAD1	YPL022W	ERV41	Q04651	352 aa		4.78	□□□□□ -1.64
RAD1	YPL022W	TY1B-A	O13527	1196 aa	Known RBP	4.78	□□□□□ -1.64
RAD1	YPL022W	TOA1	P32773	286 aa		4.78	□□□□□ -1.64
RAD1	YPL022W	MFT1	P33441	392 aa	Known RBP	4.78	□□□□□ -1.64
RAD1	YPL022W	YVC1	Q12324	675 aa		4.78	□□□□□ -1.64
RAD1	YPL022W	RAD9	P14737	1309 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	DSF2	P38213	736 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	RTT107	P38850	1070 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	NOP7	P53261	605 aa	Known RBP	4.77	□□□□□ -1.65
RAD1	YPL022W	VPS72	Q03388	795 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	YLL054C	Q12244	843 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	NHA1	Q99271	985 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	YGL081W	P53156	320 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	APL5	Q08951	932 aa	Known RBP	4.77	□□□□□ -1.65
RAD1	YPL022W	HIF1	Q12373	385 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	BPT1	P14772	1559 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	RPC82	P32349	654 aa		4.77	□□□□□ -1.65
RAD1	YPL022W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
RAD1	YPL022W	PET111	P08468	800 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	YMR124W	P39523	943 aa	Known RBP	4.76	□□□□□ -1.65
RAD1	YPL022W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RAD1	YPL022W	SUB1	P54000	292 aa	Known RBP	4.76	□□□□□ -1.65
RAD1	YPL022W	MRS2	Q01926	470 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	SEC39	Q12745	709 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	RPP0	P05317	312 aa	Known RBP	4.76	□□□□□ -1.65
RAD1	YPL022W	RKM3	P38222	552 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	TSC11	P40061	1430 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	IRC20	Q06554	1556 aa		4.76	□□□□□ -1.65
RAD1	YPL022W	SML1	Q04964	104 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	YOL087C	Q99247	1116 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	REV3	P14284	1504 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	MLP2	P40457	1679 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	SIN3	P22579	1536 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	RAD3	P06839	778 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	SEC9	P40357	651 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	YDL144C	Q07589	356 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	MCM1	P11746	286 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	CYC8	P14922	966 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	VPS41	P38959	992 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	STU2	P46675	888 aa		4.75	□□□□□ -1.65
RAD1	YPL022W	DNA2	P38859	1522 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	KAR3	P17119	729 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	GEA1	P47102	1408 aa	Predicted RBP	4.74	□□□□□ -1.65
RAD1	YPL022W	NDC80	P40460	691 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	LEM3	P42838	414 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	PXR1	P53335	271 aa	Predicted RBP	4.74	□□□□□ -1.65
RAD1	YPL022W	ALD3	P54114	506 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	SWR1	Q05471	1514 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	PHO87	P25360	923 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	SLD2	P34252	453 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	CEP3	P40969	608 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	MPP10	P47083	593 aa	Known RBP	4.74	□□□□□ -1.65
RAD1	YPL022W	PEX19	Q07418	342 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	SLP1	Q12232	587 aa		4.74	□□□□□ -1.65
RAD1	YPL022W	HOS4	P40480	1083 aa		4.73	□□□□□ -1.65
RAD1	YPL022W	SRS2	P12954	1174 aa		4.73	□□□□□ -1.65
RAD1	YPL022W	PSO2	P30620	661 aa		4.73	□□□□□ -1.65
RAD1	YPL022W	YNL050C	P53952	270 aa		4.73	□□□□□ -1.65
RAD1	YPL022W	TLG2	Q08144	397 aa		4.73	□□□□□ -1.65
RAD1	YPL022W	HAP5	Q02516	242 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	DPH5	P32469	300 aa	Predicted RBP	4.72	□□□□□ -1.65
RAD1	YPL022W	NUF2	P33895	451 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	RPG1	P38249	964 aa	Known RBP	4.72	□□□□□ -1.65
RAD1	YPL022W	PRP31	P49704	494 aa	Predicted RBP	4.72	□□□□□ -1.65
RAD1	YPL022W	NDL1	Q06568	189 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	HSL1	P34244	1518 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	MAK11	P20484	414 aa	Known RBP	4.72	□□□□□ -1.65
RAD1	YPL022W	TOM71	P38825	639 aa	Known RBP	4.72	□□□□□ -1.65
RAD1	YPL022W	SIT1	P39980	628 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	PEA2	P40091	420 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	VID30	P53076	958 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	NFI1	Q12216	726 aa		4.72	□□□□□ -1.65
RAD1	YPL022W	SUI2	P20459	304 aa	Known RBP	4.71	□□□□□ -1.66
RAD1	YPL022W	YKR023W	P36119	530 aa	Known RBP	4.71	□□□□□ -1.66
RAD1	YPL022W	DNM1	P54861	757 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	TIM50	Q02776	476 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	OLA1	P38219	394 aa	Known RBP	4.71	□□□□□ -1.66
RAD1	YPL022W	SAP1	P39955	897 aa	Known RBP	4.71	□□□□□ -1.66
RAD1	YPL022W	RIO2	P40160	425 aa	Known RBP	4.71	□□□□□ -1.66
RAD1	YPL022W	AIM20	P40451	204 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	RPN12	P32496	274 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	MNR2	P35724	969 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	SPO19	Q03029	223 aa		4.71	□□□□□ -1.66
RAD1	YPL022W	LAM1	P38851	1228 aa		4.7	□□□□□ -1.66
RAD1	YPL022W	RVS167	P39743	482 aa	Known RBP	4.7	□□□□□ -1.66
RAD1	YPL022W	APL6	P46682	809 aa		4.7	□□□□□ -1.66
RAD1	YPL022W	YOR389W	Q08912	624 aa		4.7	□□□□□ -1.66
RAD1	YPL022W	NUP157	P40064	1391 aa	Known RBP	4.7	□□□□□ -1.66
RAD1	YPL022W	POL1	P13382	1468 aa		4.7	□□□□□ -1.66
RAD1	YPL022W	SEC14	P24280	304 aa	Known RBP	4.7	□□□□□ -1.66
RAD1	YPL022W	CDC11	P32458	415 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms