RNA–Protein interactions for RNA: YOR167C

RPS28A, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS28A, Length 204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS28AYOR167C TY4B-JP47024 1803 aa8.87□□□□□ -0.99
RPS28AYOR167C BFR2Q06631 534 aaKnown RBP8.87□□□□□ -0.99
RPS28AYOR167C PRP45P28004 379 aaPredicted RBP8.86□□□□□ -0.99
RPS28AYOR167C TAF5P38129 798 aa8.83□□□□□ -1
RPS28AYOR167C URB1P34241 1764 aaKnown RBP8.82□□□□□ -1
RPS28AYOR167C UBP1P25037 809 aa8.82□□□□□ -1
RPS28AYOR167C CPS1P27614 576 aa8.82□□□□□ -1
RPS28AYOR167C LEU3P08638 886 aa8.8□□□□□ -1
RPS28AYOR167C NAP1P25293 417 aaKnown RBP8.79□□□□□ -1
RPS28AYOR167C RCM1P53972 490 aa8.79□□□□□ -1
RPS28AYOR167C PSK1P31374 1356 aa8.78□□□□□ -1
RPS28AYOR167C PRP5P21372 849 aaPredicted RBP8.78□□□□□ -1
RPS28AYOR167C RPN11P43588 306 aaKnown RBP8.78□□□□□ -1
RPS28AYOR167C EDE1P34216 1381 aa8.77□□□□□ -1.01
RPS28AYOR167C FKS3Q04952 1785 aa8.77□□□□□ -1.01
RPS28AYOR167C YBL086CP38177 466 aa8.77□□□□□ -1.01
RPS28AYOR167C NOP7P53261 605 aaKnown RBP8.77□□□□□ -1.01
RPS28AYOR167C TAF8Q03750 510 aa8.77□□□□□ -1.01
RPS28AYOR167C ADE6P38972 1358 aaKnown RBP8.75□□□□□ -1.01
RPS28AYOR167C PPH3P32345 308 aa8.75□□□□□ -1.01
RPS28AYOR167C MSB3P48566 633 aaPredicted RBP8.75□□□□□ -1.01
RPS28AYOR167C DOT5P40553 215 aa8.74□□□□□ -1.01
RPS28AYOR167C ROM2P51862 1356 aaKnown RBP8.73□□□□□ -1.01
RPS28AYOR167C IES2P40154 320 aa8.72□□□□□ -1.01
RPS28AYOR167C RSF2P46974 1380 aa8.72□□□□□ -1.01
RPS28AYOR167C FOX2Q02207 900 aaKnown RBP8.71□□□□□ -1.02
RPS28AYOR167C SSA1P10591 642 aaKnown RBP8.7□□□□□ -1.02
RPS28AYOR167C ESL2P36168 1195 aa8.7□□□□□ -1.02
RPS28AYOR167C NPR2P39923 615 aa8.7□□□□□ -1.02
RPS28AYOR167C GTT3P39996 337 aa8.7□□□□□ -1.02
RPS28AYOR167C UGA2P38067 497 aa8.69□□□□□ -1.02
RPS28AYOR167C LYS4P49367 693 aaPredicted RBP8.69□□□□□ -1.02
RPS28AYOR167C SSA2P10592 639 aaKnown RBP8.67□□□□□ -1.02
RPS28AYOR167C TCB1Q12466 1186 aa8.67□□□□□ -1.02
RPS28AYOR167C YJL181WP46987 611 aa8.66□□□□□ -1.02
RPS28AYOR167C ALD2P47771 506 aa8.65□□□□□ -1.02
RPS28AYOR167C YRF1-3P0CX14 1859 aa8.65□□□□□ -1.02
RPS28AYOR167C YRF1-7P0CX15 1859 aa8.65□□□□□ -1.02
RPS28AYOR167C YRF1-6P53819 1859 aa8.65□□□□□ -1.02
RPS28AYOR167C CTH1P47976 325 aa8.64□□□□□ -1.03
RPS28AYOR167C SLM3Q12093 417 aa8.64□□□□□ -1.03
RPS28AYOR167C PRP40P33203 583 aaKnown RBP8.62□□□□□ -1.03
RPS28AYOR167C LAM6Q08001 693 aa8.62□□□□□ -1.03
RPS28AYOR167C YIL177CP40434 1758 aa8.62□□□□□ -1.03
RPS28AYOR167C YJL225CP40889 1758 aa8.62□□□□□ -1.03
RPS28AYOR167C APC1P53886 1748 aa8.61□□□□□ -1.03
RPS28AYOR167C YEF3P16521 1044 aaKnown RBP8.61□□□□□ -1.03
RPS28AYOR167C COBP00163 385 aa8.59□□□□□ -1.03
RPS28AYOR167C YKL133CP36066 463 aa8.59□□□□□ -1.03
RPS28AYOR167C NOP2P40991 618 aaKnown RBP8.59□□□□□ -1.03
RPS28AYOR167C PRY3P47033 881 aa8.59□□□□□ -1.03
RPS28AYOR167C YRF1-4O13559 1382 aa8.59□□□□□ -1.03
RPS28AYOR167C SPE2P21182 396 aa8.58□□□□□ -1.04
RPS28AYOR167C YKR075CP36155 307 aa8.58□□□□□ -1.04
RPS28AYOR167C PRP43P53131 767 aaKnown RBP8.58□□□□□ -1.04
RPS28AYOR167C CSE4P36012 229 aa8.57□□□□□ -1.04
RPS28AYOR167C XKS1P42826 600 aa8.57□□□□□ -1.04
RPS28AYOR167C SNF2P22082 1703 aa8.57□□□□□ -1.04
RPS28AYOR167C RPS24AP0CX31 135 aaKnown RBP8.56□□□□□ -1.04
RPS28AYOR167C RPS24BP0CX32 135 aaKnown RBP8.56□□□□□ -1.04
RPS28AYOR167C ENP1P38333 483 aaKnown RBP8.56□□□□□ -1.04
RPS28AYOR167C MTR4P47047 1073 aaKnown RBP8.56□□□□□ -1.04
RPS28AYOR167C LEU2P04173 364 aaPredicted RBP8.54□□□□□ -1.04
RPS28AYOR167C KIP3P53086 805 aaKnown RBP8.54□□□□□ -1.04
RPS28AYOR167C YLR419WQ06698 1435 aaKnown RBP8.51□□□□□ -1.05
RPS28AYOR167C YML133CQ03099 1374 aa8.5□□□□□ -1.05
RPS28AYOR167C YLL067CQ07888 1374 aa8.5□□□□□ -1.05
RPS28AYOR167C YLL066CQ99208 1374 aa8.5□□□□□ -1.05
RPS28AYOR167C SPT7P35177 1332 aa8.5□□□□□ -1.05
RPS28AYOR167C BDF1P35817 686 aa8.49□□□□□ -1.05
RPS28AYOR167C RRD1P40454 393 aaKnown RBP8.49□□□□□ -1.05
RPS28AYOR167C FRK1Q03002 865 aaPredicted RBP8.49□□□□□ -1.05
RPS28AYOR167C CHZ1P40019 153 aaPredicted RBP8.48□□□□□ -1.05
RPS28AYOR167C SIR4P11978 1358 aa8.47□□□□□ -1.05
RPS28AYOR167C RIM15P43565 1770 aa8.46□□□□□ -1.05
RPS28AYOR167C ALD3P54114 506 aa8.46□□□□□ -1.06
RPS28AYOR167C RPG1P38249 964 aaKnown RBP8.45□□□□□ -1.06
RPS28AYOR167C ADE16P54113 591 aaKnown RBP8.44□□□□□ -1.06
RPS28AYOR167C MEC3Q02574 474 aa8.44□□□□□ -1.06
RPS28AYOR167C AAD16Q02895 342 aa8.43□□□□□ -1.06
RPS28AYOR167C DPS1P04802 557 aaKnown RBP8.42□□□□□ -1.06
RPS28AYOR167C EAF6P47128 113 aa8.42□□□□□ -1.06
RPS28AYOR167C MSB4Q12317 492 aa8.42□□□□□ -1.06
RPS28AYOR167C RPO41P13433 1351 aaKnown RBP8.41□□□□□ -1.06
RPS28AYOR167C RCR1P38212 213 aa8.41□□□□□ -1.06
RPS28AYOR167C BUG1Q12191 341 aa8.4□□□□□ -1.06
RPS28AYOR167C GAS4Q08271 471 aa8.39□□□□□ -1.07
RPS28AYOR167C NSR1P27476 414 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
RPS28AYOR167C TOS1P38288 455 aa8.38□□□□□ -1.07
RPS28AYOR167C ORC1P54784 914 aaPredicted RBP8.37□□□□□ -1.07
RPS28AYOR167C RAD4P14736 754 aa8.36□□□□□ -1.07
RPS28AYOR167C SAP155P43612 1002 aa8.36□□□□□ -1.07
RPS28AYOR167C UTP22P53254 1237 aaPredicted RBP8.36□□□□□ -1.07
RPS28AYOR167C ATG13Q06628 738 aa8.36□□□□□ -1.07
RPS28AYOR167C PDI1P17967 522 aaKnown RBP8.35□□□□□ -1.07
RPS28AYOR167C MSN5P52918 1224 aa8.35□□□□□ -1.07
RPS28AYOR167C GRE2Q12068 342 aaKnown RBP8.35□□□□□ -1.07
RPS28AYOR167C MHP1P43638 1398 aa8.35□□□□□ -1.07
RPS28AYOR167C RTF1P53064 558 aa8.34□□□□□ -1.07
RPS28AYOR167C AUS1Q08409 1394 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms