RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W KEX2P13134 814 aa9.69□□□□□ -0.86
VAM3YOR106W RTF1P53064 558 aa9.66□□□□□ -0.86
VAM3YOR106W TY1A-DR4O74302 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-HP0C2I4 478 aaKnown RBP9.65□□□□□ -0.86
VAM3YOR106W TY1A-AP0CX57 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-PR1P0CX58 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-ORP0CX59 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-PR2P0CX60 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-DR5P0CX65 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-ER2P0CX66 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-GR3P0CX67 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-LR1P0CX68 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-MR2P0CX69 440 aa9.65□□□□□ -0.86
VAM3YOR106W SIT4P20604 311 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-JR2P47099 440 aa9.65□□□□□ -0.86
VAM3YOR106W FPK1P53739 893 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-DR1Q03856 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-ML1Q04706 440 aaKnown RBP9.65□□□□□ -0.86
VAM3YOR106W TY1A-BRQ12217 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-NL2Q12470 440 aa9.65□□□□□ -0.86
VAM3YOR106W TY1A-GR2Q12485 440 aa9.65□□□□□ -0.86
VAM3YOR106W YNL115CP53925 644 aa9.64□□□□□ -0.87
VAM3YOR106W ERF2Q06551 359 aa9.64□□□□□ -0.87
VAM3YOR106W KIN1P13185 1064 aa9.63□□□□□ -0.87
VAM3YOR106W SEC2P17065 759 aa9.63□□□□□ -0.87
VAM3YOR106W PAT1P25644 796 aaKnown RBP9.62□□□□□ -0.87
VAM3YOR106W MRF1P30775 413 aaPredicted RBP9.62□□□□□ -0.87
VAM3YOR106W SPT16P32558 1035 aaKnown RBP9.62□□□□□ -0.87
VAM3YOR106W RRN7P40992 514 aa9.6□□□□□ -0.87
VAM3YOR106W HST2P53686 357 aa9.59□□□□□ -0.87
VAM3YOR106W DPS1P04802 557 aaKnown RBP9.58□□□□□ -0.88
VAM3YOR106W SLY41P22215 453 aa9.58□□□□□ -0.88
VAM3YOR106W GLN1P32288 370 aaKnown RBP9.57□□□□□ -0.88
VAM3YOR106W ERG12P07277 443 aa9.56□□□□□ -0.88
VAM3YOR106W MMP1Q12372 583 aa9.56□□□□□ -0.88
VAM3YOR106W YEL077CQ3E7X8 1277 aa9.55□□□□□ -0.88
VAM3YOR106W SCJ1P25303 377 aa9.54□□□□□ -0.88
VAM3YOR106W CSN12P47130 423 aa9.53□□□□□ -0.88
VAM3YOR106W TUB4P53378 473 aa9.53□□□□□ -0.88
VAM3YOR106W TYW1Q08960 810 aaKnown RBP9.53□□□□□ -0.88
VAM3YOR106W SDH2P21801 266 aa9.52□□□□□ -0.89
VAM3YOR106W AMS1P22855 1083 aa9.51□□□□□ -0.89
VAM3YOR106W LEO1P38439 464 aa9.51□□□□□ -0.89
VAM3YOR106W AGE1Q04412 482 aa9.51□□□□□ -0.89
VAM3YOR106W ESS1P22696 170 aa9.49□□□□□ -0.89
VAM3YOR106W PAC1P39946 494 aaKnown RBP9.49□□□□□ -0.89
VAM3YOR106W TBF1Q02457 562 aa9.49□□□□□ -0.89
VAM3YOR106W SSA2P10592 639 aaKnown RBP9.48□□□□□ -0.89
VAM3YOR106W RAS1P01119 309 aa9.46□□□□□ -0.9
VAM3YOR106W KTR1P27810 393 aaKnown RBP9.46□□□□□ -0.9
VAM3YOR106W PUS6P53294 404 aa9.46□□□□□ -0.9
VAM3YOR106W PKH3Q03306 898 aaPredicted RBP9.45□□□□□ -0.9
VAM3YOR106W TRM1P15565 570 aaKnown RBP9.44□□□□□ -0.9
VAM3YOR106W YJU3P28321 313 aa9.43□□□□□ -0.9
VAM3YOR106W GUA1P38625 525 aaKnown RBP9.43□□□□□ -0.9
VAM3YOR106W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
VAM3YOR106W KXD1P53158 218 aa9.42□□□□□ -0.9
VAM3YOR106W LAM6Q08001 693 aa9.42□□□□□ -0.9
VAM3YOR106W CST6P40535 587 aa9.41□□□□□ -0.9
VAM3YOR106W FRK1Q03002 865 aaPredicted RBP9.41□□□□□ -0.9
VAM3YOR106W YDL206WQ12424 762 aa9.41□□□□□ -0.9
VAM3YOR106W ARG8P18544 423 aa9.4□□□□□ -0.9
VAM3YOR106W BDP1P46678 594 aa9.39□□□□□ -0.91
VAM3YOR106W ALR1Q08269 859 aa9.38□□□□□ -0.91
VAM3YOR106W MOD5P07884 428 aa9.37□□□□□ -0.91
VAM3YOR106W RPA14P50106 137 aa9.37□□□□□ -0.91
VAM3YOR106W PDC1P06169 563 aaKnown RBP9.35□□□□□ -0.91
VAM3YOR106W HPC2Q01448 625 aa9.35□□□□□ -0.91
VAM3YOR106W RAD59Q12223 238 aa9.35□□□□□ -0.91
VAM3YOR106W HXT10P43581 546 aa9.34□□□□□ -0.91
VAM3YOR106W BRL1P38770 471 aa9.33□□□□□ -0.92
VAM3YOR106W RSC30P38781 883 aa9.33□□□□□ -0.92
VAM3YOR106W YPR097WQ06839 1073 aa9.33□□□□□ -0.92
VAM3YOR106W RRD1P40454 393 aaKnown RBP9.32□□□□□ -0.92
VAM3YOR106W TPD3P31383 635 aa9.31□□□□□ -0.92
VAM3YOR106W PUS5Q06244 254 aa9.29□□□□□ -0.92
VAM3YOR106W TFB3Q03290 321 aa9.27□□□□□ -0.93
VAM3YOR106W HGH1P48362 394 aaKnown RBP9.26□□□□□ -0.93
VAM3YOR106W HED1Q03937 162 aa9.26□□□□□ -0.93
VAM3YOR106W SRC1Q03707 834 aa9.25□□□□□ -0.93
VAM3YOR106W TRK1P12685 1235 aa9.24□□□□□ -0.93
VAM3YOR106W CLA4P48562 842 aa9.24□□□□□ -0.93
VAM3YOR106W SYH1Q02875 849 aaKnown RBP9.23□□□□□ -0.93
VAM3YOR106W KIP2P28743 706 aa9.22□□□□□ -0.93
VAM3YOR106W AIR1P40507 360 aaKnown RBP9.22□□□□□ -0.93
VAM3YOR106W YBL036CP38197 257 aa9.21□□□□□ -0.94
VAM3YOR106W CDC4P07834 779 aa9.19□□□□□ -0.94
VAM3YOR106W MAK16P10962 306 aaPredicted RBP9.19□□□□□ -0.94
VAM3YOR106W CSE4P36012 229 aa9.19□□□□□ -0.94
VAM3YOR106W PKC1P24583 1151 aa9.18□□□□□ -0.94
VAM3YOR106W IXR1P33417 597 aa9.18□□□□□ -0.94
VAM3YOR106W VAC17P25591 423 aa9.15□□□□□ -0.94
VAM3YOR106W TEC1P18412 486 aa9.12□□□□□ -0.95
VAM3YOR106W FIG4P42837 879 aa9.12□□□□□ -0.95
VAM3YOR106W NAF1P53919 492 aaKnown RBP9.12□□□□□ -0.95
VAM3YOR106W MET32Q12041 191 aa9.12□□□□□ -0.95
VAM3YOR106W HST3P53687 447 aa9.11□□□□□ -0.95
VAM3YOR106W SPT5P27692 1063 aaKnown RBP9.1□□□□□ -0.95
VAM3YOR106W DMA2P53924 522 aa9.09□□□□□ -0.95
VAM3YOR106W ASH1P34233 588 aa9.08□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms