RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C TY1A-ER2P0CX66 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-GR3P0CX67 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-LR1P0CX68 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-MR2P0CX69 440 aa6.88□□□□□ -1.31
ATG3YNR007C SEC2P17065 759 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-JR2P47099 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-DR1Q03856 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-ML1Q04706 440 aaKnown RBP6.88□□□□□ -1.31
ATG3YNR007C TY1A-BRQ12217 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-NL2Q12470 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-GR2Q12485 440 aa6.88□□□□□ -1.31
ATG3YNR007C SPB4P25808 606 aaPredicted RBP6.87□□□□□ -1.31
ATG3YNR007C CLB5P30283 435 aa6.87□□□□□ -1.31
ATG3YNR007C IES2P40154 320 aa6.87□□□□□ -1.31
ATG3YNR007C SPT16P32558 1035 aaKnown RBP6.86□□□□□ -1.31
ATG3YNR007C NUP42P49686 430 aaKnown RBP6.84□□□□□ -1.31
ATG3YNR007C TRK1P12685 1235 aa6.83□□□□□ -1.32
ATG3YNR007C PAT1P25644 796 aaKnown RBP6.83□□□□□ -1.32
ATG3YNR007C KEX2P13134 814 aa6.82□□□□□ -1.32
ATG3YNR007C RRN7P40992 514 aa6.81□□□□□ -1.32
ATG3YNR007C CST6P40535 587 aa6.79□□□□□ -1.32
ATG3YNR007C TEA1P47988 759 aa6.79□□□□□ -1.32
ATG3YNR007C ERF2Q06551 359 aa6.79□□□□□ -1.32
ATG3YNR007C DIT2P21595 489 aa6.78□□□□□ -1.32
ATG3YNR007C RTF1P53064 558 aa6.77□□□□□ -1.33
ATG3YNR007C LAM6Q08001 693 aa6.77□□□□□ -1.33
ATG3YNR007C SIT4P20604 311 aa6.75□□□□□ -1.33
ATG3YNR007C YNL115CP53925 644 aa6.74□□□□□ -1.33
ATG3YNR007C FRK1Q03002 865 aaPredicted RBP6.74□□□□□ -1.33
ATG3YNR007C BDP1P46678 594 aa6.73□□□□□ -1.33
ATG3YNR007C RQC2Q12532 1038 aaKnown RBP6.73□□□□□ -1.33
ATG3YNR007C PAC1P39946 494 aaKnown RBP6.72□□□□□ -1.33
ATG3YNR007C TUB4P53378 473 aa6.72□□□□□ -1.33
ATG3YNR007C NIS1P53939 407 aa6.72□□□□□ -1.33
ATG3YNR007C AGE1Q04412 482 aa6.72□□□□□ -1.33
ATG3YNR007C AIR1P40507 360 aaKnown RBP6.71□□□□□ -1.34
ATG3YNR007C CLA4P48562 842 aa6.71□□□□□ -1.34
ATG3YNR007C MOD5P07884 428 aa6.68□□□□□ -1.34
ATG3YNR007C HED1Q03937 162 aa6.68□□□□□ -1.34
ATG3YNR007C CDC4P07834 779 aa6.67□□□□□ -1.34
ATG3YNR007C FPK1P53739 893 aa6.67□□□□□ -1.34
ATG3YNR007C YMR196WQ04336 1088 aa6.67□□□□□ -1.34
ATG3YNR007C GCR2Q01722 534 aa6.66□□□□□ -1.34
ATG3YNR007C BRE2P43132 505 aa6.65□□□□□ -1.34
ATG3YNR007C ATF2P53296 535 aa6.65□□□□□ -1.34
ATG3YNR007C SLY41P22215 453 aa6.64□□□□□ -1.35
ATG3YNR007C YNR021WP53723 404 aaKnown RBP6.64□□□□□ -1.35
ATG3YNR007C KXD1P53158 218 aa6.63□□□□□ -1.35
ATG3YNR007C TPD3P31383 635 aa6.61□□□□□ -1.35
ATG3YNR007C HST2P53686 357 aa6.61□□□□□ -1.35
ATG3YNR007C MON2P48563 1636 aaPredicted RBP6.61□□□□□ -1.35
ATG3YNR007C PUS5Q06244 254 aa6.6□□□□□ -1.35
ATG3YNR007C HXT10P43581 546 aa6.59□□□□□ -1.35
ATG3YNR007C PUS6P53294 404 aa6.59□□□□□ -1.35
ATG3YNR007C GLC3P32775 704 aa6.58□□□□□ -1.36
ATG3YNR007C MMP1Q12372 583 aa6.58□□□□□ -1.36
ATG3YNR007C PDC1P06169 563 aaKnown RBP6.57□□□□□ -1.36
ATG3YNR007C SCJ1P25303 377 aa6.57□□□□□ -1.36
ATG3YNR007C RRD1P40454 393 aaKnown RBP6.57□□□□□ -1.36
ATG3YNR007C TBF1Q02457 562 aa6.57□□□□□ -1.36
ATG3YNR007C MET32Q12041 191 aa6.57□□□□□ -1.36
ATG3YNR007C INO80P53115 1489 aa6.56□□□□□ -1.36
ATG3YNR007C GLN1P32288 370 aaKnown RBP6.56□□□□□ -1.36
ATG3YNR007C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
ATG3YNR007C RPA14P50106 137 aa6.56□□□□□ -1.36
ATG3YNR007C ALR1Q08269 859 aa6.56□□□□□ -1.36
ATG3YNR007C AFT1P22149 690 aa6.55□□□□□ -1.36
ATG3YNR007C ASH1P34233 588 aa6.55□□□□□ -1.36
ATG3YNR007C RGA1P39083 1007 aa6.55□□□□□ -1.36
ATG3YNR007C AIM7Q12156 149 aa6.55□□□□□ -1.36
ATG3YNR007C YDL206WQ12424 762 aa6.55□□□□□ -1.36
ATG3YNR007C HST3P53687 447 aa6.54□□□□□ -1.36
ATG3YNR007C SYH1Q02875 849 aaKnown RBP6.54□□□□□ -1.36
ATG3YNR007C YPR097WQ06839 1073 aa6.54□□□□□ -1.36
ATG3YNR007C TRM1P15565 570 aaKnown RBP6.53□□□□□ -1.36
ATG3YNR007C ESS1P22696 170 aa6.51□□□□□ -1.37
ATG3YNR007C GAR1P28007 205 aaKnown RBP6.49□□□□□ -1.37
ATG3YNR007C MET22P32179 357 aa6.49□□□□□ -1.37
ATG3YNR007C KIP2P28743 706 aa6.48□□□□□ -1.37
ATG3YNR007C ENV9Q08651 330 aa6.48□□□□□ -1.37
ATG3YNR007C TYW1Q08960 810 aaKnown RBP6.48□□□□□ -1.37
ATG3YNR007C GBP2P25555 427 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37 RIP-Chip
ATG3YNR007C YJU3P28321 313 aa6.47□□□□□ -1.37
ATG3YNR007C MSB3P48566 633 aaPredicted RBP6.46□□□□□ -1.38
ATG3YNR007C YPL062WQ02781 134 aa6.46□□□□□ -1.38
ATG3YNR007C KTR1P27810 393 aaKnown RBP6.45□□□□□ -1.38
ATG3YNR007C IXR1P33417 597 aa6.45□□□□□ -1.38
ATG3YNR007C RSC30P38781 883 aa6.45□□□□□ -1.38
ATG3YNR007C CSN12P47130 423 aa6.45□□□□□ -1.38
ATG3YNR007C YJR115WP47152 169 aa6.45□□□□□ -1.38
ATG3YNR007C YDR444WQ04093 687 aa6.45□□□□□ -1.38
ATG3YNR007C PKH3Q03306 898 aaPredicted RBP6.44□□□□□ -1.38
ATG3YNR007C RGA2Q06407 1009 aa6.43□□□□□ -1.38
ATG3YNR007C LEU3P08638 886 aa6.42□□□□□ -1.38
ATG3YNR007C UGA3P26370 528 aa6.42□□□□□ -1.38
ATG3YNR007C MRT4P33201 236 aaKnown RBP6.42□□□□□ -1.38
ATG3YNR007C ARG8P18544 423 aa6.41□□□□□ -1.38
ATG3YNR007C VAC17P25591 423 aa6.41□□□□□ -1.38
ATG3YNR007C RTT106P40161 455 aa6.41□□□□□ -1.38
ATG3YNR007C LCB5Q06147 687 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms