RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W TY1A-LR1P0CX68 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-MR2P0CX69 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-JR2P47099 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-DR1Q03856 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-ML1Q04706 440 aaKnown RBP7.51□□□□□ -1.21
SWM2YNR004W TY1A-BRQ12217 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-NL2Q12470 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-GR2Q12485 440 aa7.51□□□□□ -1.21
SWM2YNR004W SEC2P17065 759 aa7.49□□□□□ -1.21
SWM2YNR004W ORC6P38826 435 aa7.49□□□□□ -1.21
SWM2YNR004W REF2P42073 533 aaPredicted RBP7.49□□□□□ -1.21
SWM2YNR004W CDC4P07834 779 aa7.48□□□□□ -1.21
SWM2YNR004W RRN7P40992 514 aa7.47□□□□□ -1.21
SWM2YNR004W BDP1P46678 594 aa7.46□□□□□ -1.22
SWM2YNR004W PAT1P25644 796 aaKnown RBP7.45□□□□□ -1.22
SWM2YNR004W MVP1P40959 511 aaKnown RBP7.42□□□□□ -1.22
SWM2YNR004W MET22P32179 357 aa7.41□□□□□ -1.22
SWM2YNR004W YPR148CQ06523 435 aa7.41□□□□□ -1.22
SWM2YNR004W ENV9Q08651 330 aa7.4□□□□□ -1.22
SWM2YNR004W HED1Q03937 162 aa7.39□□□□□ -1.23
SWM2YNR004W YPR109WQ06104 294 aa7.38□□□□□ -1.23
SWM2YNR004W MAK21Q12176 1025 aaKnown RBP7.38□□□□□ -1.23
SWM2YNR004W YDR444WQ04093 687 aa7.36□□□□□ -1.23
SWM2YNR004W COX6P00427 148 aa7.35□□□□□ -1.23
SWM2YNR004W RGR1P19263 1082 aa7.34□□□□□ -1.23
SWM2YNR004W KEX2P13134 814 aa7.32□□□□□ -1.24
SWM2YNR004W VPS70P47161 811 aa7.32□□□□□ -1.24
SWM2YNR004W ASH1P34233 588 aa7.29□□□□□ -1.24
SWM2YNR004W ERF2Q06551 359 aa7.29□□□□□ -1.24
SWM2YNR004W HST3P53687 447 aa7.28□□□□□ -1.24
SWM2YNR004W LCB5Q06147 687 aaKnown RBP7.28□□□□□ -1.24
SWM2YNR004W MET32Q12041 191 aa7.28□□□□□ -1.24
SWM2YNR004W PAC1P39946 494 aaKnown RBP7.27□□□□□ -1.25
SWM2YNR004W AFT1P22149 690 aa7.26□□□□□ -1.25
SWM2YNR004W MOD5P07884 428 aa7.23□□□□□ -1.25
SWM2YNR004W PUS5Q06244 254 aa7.23□□□□□ -1.25
SWM2YNR004W YDL176WQ12027 708 aa7.23□□□□□ -1.25
SWM2YNR004W TUB4P53378 473 aa7.2□□□□□ -1.26
SWM2YNR004W RRD1P40454 393 aaKnown RBP7.19□□□□□ -1.26
SWM2YNR004W AGE1Q04412 482 aa7.19□□□□□ -1.26
SWM2YNR004W YJR115WP47152 169 aa7.17□□□□□ -1.26
SWM2YNR004W CLB5P30283 435 aa7.16□□□□□ -1.26
SWM2YNR004W PSE1P32337 1089 aaKnown RBP7.16□□□□□ -1.26
SWM2YNR004W RTF1P53064 558 aa7.14□□□□□ -1.27
SWM2YNR004W PBS2P08018 668 aa7.1□□□□□ -1.27
SWM2YNR004W MSB3P48566 633 aaPredicted RBP7.1□□□□□ -1.27
SWM2YNR004W KXD1P53158 218 aa7.1□□□□□ -1.27
SWM2YNR004W YNL115CP53925 644 aa7.1□□□□□ -1.27
SWM2YNR004W CAF120P53836 1060 aa7.08□□□□□ -1.28
SWM2YNR004W SYH1Q02875 849 aaKnown RBP7.07□□□□□ -1.28
SWM2YNR004W UGA3P26370 528 aa7.05□□□□□ -1.28
SWM2YNR004W TPD3P31383 635 aa7.05□□□□□ -1.28
SWM2YNR004W CKB1P43639 278 aa7.05□□□□□ -1.28
SWM2YNR004W HXT10P43581 546 aa7.04□□□□□ -1.28
SWM2YNR004W SRF1Q12516 437 aa7.04□□□□□ -1.28
SWM2YNR004W MAM3Q12296 706 aa7.03□□□□□ -1.28
SWM2YNR004W SIT4P20604 311 aa7.01□□□□□ -1.29
SWM2YNR004W ACO2P39533 789 aa7.01□□□□□ -1.29
SWM2YNR004W PTK2P47116 818 aaKnown RBP7.01□□□□□ -1.29
SWM2YNR004W YLR346CQ06139 101 aa7.01□□□□□ -1.29
SWM2YNR004W OPT2Q06593 877 aa7.01□□□□□ -1.29
SWM2YNR004W PDC1P06169 563 aaKnown RBP7□□□□□ -1.29
SWM2YNR004W TEA1P47988 759 aa7□□□□□ -1.29
SWM2YNR004W MTC5Q03897 1148 aa7□□□□□ -1.29
SWM2YNR004W KIP2P28743 706 aa6.98□□□□□ -1.29
SWM2YNR004W NIS1P53939 407 aa6.98□□□□□ -1.29
SWM2YNR004W IES2P40154 320 aa6.97□□□□□ -1.29
SWM2YNR004W YGR035CP53222 116 aa6.97□□□□□ -1.29
SWM2YNR004W TYW1Q08960 810 aaKnown RBP6.96□□□□□ -1.3
SWM2YNR004W SLY41P22215 453 aa6.95□□□□□ -1.3
SWM2YNR004W TRK2P28584 889 aa6.95□□□□□ -1.3
SWM2YNR004W TBF1Q02457 562 aa6.94□□□□□ -1.3
SWM2YNR004W GLY1P37303 387 aaKnown RBP6.93□□□□□ -1.3
SWM2YNR004W ALR1Q08269 859 aa6.93□□□□□ -1.3
SWM2YNR004W IXR1P33417 597 aa6.92□□□□□ -1.3
SWM2YNR004W YIR007WP40566 764 aa6.92□□□□□ -1.3
SWM2YNR004W SCW11P53189 542 aa6.92□□□□□ -1.3
SWM2YNR004W YMR196WQ04336 1088 aa6.92□□□□□ -1.3
SWM2YNR004W YDL206WQ12424 762 aa6.92□□□□□ -1.3
SWM2YNR004W NUP85P46673 744 aa6.91□□□□□ -1.3
SWM2YNR004W MIP1P15801 1254 aa6.9□□□□□ -1.3
SWM2YNR004W RPA14P50106 137 aa6.9□□□□□ -1.3
SWM2YNR004W HPF1Q05164 967 aa6.9□□□□□ -1.3
SWM2YNR004W MRT4P33201 236 aaKnown RBP6.89□□□□□ -1.31
SWM2YNR004W DSF2P38213 736 aa6.89□□□□□ -1.31
SWM2YNR004W FPK1P53739 893 aa6.89□□□□□ -1.31
SWM2YNR004W RTT106P40161 455 aa6.87□□□□□ -1.31
SWM2YNR004W NUP42P49686 430 aaKnown RBP6.87□□□□□ -1.31
SWM2YNR004W PUS6P53294 404 aa6.87□□□□□ -1.31
SWM2YNR004W YPR097WQ06839 1073 aa6.87□□□□□ -1.31
SWM2YNR004W TY1A-BLQ12266 440 aa6.87□□□□□ -1.31
SWM2YNR004W TRM1P15565 570 aaKnown RBP6.82□□□□□ -1.32
SWM2YNR004W LSC2P53312 427 aa6.82□□□□□ -1.32
SWM2YNR004W ARG82P07250 355 aa6.81□□□□□ -1.32
SWM2YNR004W YPR204WQ08995 1032 aa6.81□□□□□ -1.32
SWM2YNR004W UBP2Q01476 1272 aa6.8□□□□□ -1.32
SWM2YNR004W AAD14P42884 376 aa6.79□□□□□ -1.32
SWM2YNR004W DIT2P21595 489 aa6.78□□□□□ -1.32
SWM2YNR004W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
SWM2YNR004W SCJ1P25303 377 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms