RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W RTF1P53064 558 aa7.73□□□□□ -1.17
DDI3YNL335W PKH3Q03306 898 aaPredicted RBP7.73□□□□□ -1.17
DDI3YNL335W BMT6Q12291 365 aa7.73□□□□□ -1.17
DDI3YNL335W PDR1P12383 1068 aa7.72□□□□□ -1.17
DDI3YNL335W BNI4P53858 892 aa7.72□□□□□ -1.17
DDI3YNL335W YNL115CP53925 644 aa7.72□□□□□ -1.17
DDI3YNL335W PKC1P24583 1151 aa7.71□□□□□ -1.18
DDI3YNL335W YDR344CQ05510 147 aa7.71□□□□□ -1.18
DDI3YNL335W SLY41P22215 453 aa7.7□□□□□ -1.18
DDI3YNL335W SPT23P35210 1082 aa7.7□□□□□ -1.18
DDI3YNL335W RAD59Q12223 238 aa7.69□□□□□ -1.18
DDI3YNL335W KEX2P13134 814 aa7.68□□□□□ -1.18
DDI3YNL335W YJU3P28321 313 aa7.67□□□□□ -1.18
DDI3YNL335W YBL036CP38197 257 aa7.67□□□□□ -1.18
DDI3YNL335W PTC2P39966 464 aaKnown RBP7.67□□□□□ -1.18
DDI3YNL335W ARG8P18544 423 aa7.66□□□□□ -1.18
DDI3YNL335W PRE3P38624 215 aa7.66□□□□□ -1.18
DDI3YNL335W STR2P47164 639 aa7.66□□□□□ -1.18
DDI3YNL335W YJL007CP47080 104 aa7.65□□□□□ -1.18
DDI3YNL335W ISM1P48526 1002 aa7.65□□□□□ -1.18
DDI3YNL335W LAM6Q08001 693 aa7.65□□□□□ -1.18
DDI3YNL335W CHL1P22516 861 aaPredicted RBP7.63□□□□□ -1.19
DDI3YNL335W GCD11P32481 527 aaKnown RBP7.63□□□□□ -1.19
DDI3YNL335W ERF2Q06551 359 aa7.63□□□□□ -1.19
DDI3YNL335W RAM1P22007 431 aa7.62□□□□□ -1.19
DDI3YNL335W CSE4P36012 229 aa7.62□□□□□ -1.19
DDI3YNL335W BIM1P40013 344 aa7.62□□□□□ -1.19
DDI3YNL335W TRM1P15565 570 aaKnown RBP7.61□□□□□ -1.19
DDI3YNL335W RPL34BP40525 121 aaKnown RBP7.61□□□□□ -1.19
DDI3YNL335W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
DDI3YNL335W PUS6P53294 404 aa7.61□□□□□ -1.19
DDI3YNL335W TBF1Q02457 562 aa7.61□□□□□ -1.19
DDI3YNL335W YML082WQ04533 649 aaKnown RBP7.61□□□□□ -1.19
DDI3YNL335W BUD20Q08004 166 aaPredicted RBP7.6□□□□□ -1.19
DDI3YNL335W RSC30P38781 883 aa7.59□□□□□ -1.19
DDI3YNL335W ATG32P40458 529 aa7.59□□□□□ -1.19
DDI3YNL335W PRT1P06103 763 aaKnown RBP7.58□□□□□ -1.2
DDI3YNL335W YPR015CQ12531 247 aa7.58□□□□□ -1.2
DDI3YNL335W TY1A-DR4O74302 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-HP0C2I4 478 aaKnown RBP7.57□□□□□ -1.2
DDI3YNL335W TY1A-AP0CX57 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-PR1P0CX58 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-ORP0CX59 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-PR2P0CX60 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-DR5P0CX65 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-ER2P0CX66 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-GR3P0CX67 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-LR1P0CX68 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-MR2P0CX69 440 aa7.57□□□□□ -1.2
DDI3YNL335W BIO2P32451 375 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-JR2P47099 440 aa7.57□□□□□ -1.2
DDI3YNL335W TUB4P53378 473 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-DR1Q03856 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-ML1Q04706 440 aaKnown RBP7.57□□□□□ -1.2
DDI3YNL335W TY1A-BRQ12217 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-NL2Q12470 440 aa7.57□□□□□ -1.2
DDI3YNL335W TY1A-GR2Q12485 440 aa7.57□□□□□ -1.2
DDI3YNL335W MAK16P10962 306 aaPredicted RBP7.55□□□□□ -1.2
DDI3YNL335W SEC2P17065 759 aa7.55□□□□□ -1.2
DDI3YNL335W TIF1P10081 395 aaKnown RBP7.54□□□□□ -1.2
DDI3YNL335W PAT1P25644 796 aaKnown RBP7.54□□□□□ -1.2
DDI3YNL335W SPT5P27692 1063 aaKnown RBP7.54□□□□□ -1.2
DDI3YNL335W AGE1Q04412 482 aa7.54□□□□□ -1.2
DDI3YNL335W YDL206WQ12424 762 aa7.54□□□□□ -1.2
DDI3YNL335W RRN7P40992 514 aa7.52□□□□□ -1.21
DDI3YNL335W YNL108CP53929 270 aa7.52□□□□□ -1.21
DDI3YNL335W SPT16P32558 1035 aaKnown RBP7.51□□□□□ -1.21
DDI3YNL335W RPA14P50106 137 aa7.51□□□□□ -1.21
DDI3YNL335W GYP1Q08484 637 aa7.51□□□□□ -1.21
DDI3YNL335W RTG2P32608 588 aaKnown RBP7.5□□□□□ -1.21
DDI3YNL335W ALR1Q08269 859 aa7.5□□□□□ -1.21
DDI3YNL335W PAC1P39946 494 aaKnown RBP7.49□□□□□ -1.21
DDI3YNL335W NAF1P53919 492 aaKnown RBP7.49□□□□□ -1.21
DDI3YNL335W SAS4Q04003 481 aa7.49□□□□□ -1.21
DDI3YNL335W ERG12P07277 443 aa7.48□□□□□ -1.21
DDI3YNL335W SUP45P12385 437 aaKnown RBP7.48□□□□□ -1.21
DDI3YNL335W KXD1P53158 218 aa7.48□□□□□ -1.21
DDI3YNL335W YPR204WQ08995 1032 aa7.48□□□□□ -1.21
DDI3YNL335W YDJ1P25491 409 aaKnown RBP7.47□□□□□ -1.21
DDI3YNL335W YPR097WQ06839 1073 aa7.47□□□□□ -1.21
DDI3YNL335W ENO2P00925 437 aaKnown RBP7.45□□□□□ -1.22
DDI3YNL335W YPP1P46951 817 aa7.45□□□□□ -1.22
DDI3YNL335W PDC1P06169 563 aaKnown RBP7.44□□□□□ -1.22
DDI3YNL335W VRP1P37370 817 aa7.44□□□□□ -1.22
DDI3YNL335W SSA4P22202 642 aaKnown RBP7.42□□□□□ -1.22
DDI3YNL335W MRF1P30775 413 aaPredicted RBP7.42□□□□□ -1.22
DDI3YNL335W HXT10P43581 546 aa7.42□□□□□ -1.22
DDI3YNL335W MCM16Q12262 181 aa7.42□□□□□ -1.22
DDI3YNL335W RIM21P48565 533 aa7.41□□□□□ -1.22
DDI3YNL335W ENO1P00924 437 aaKnown RBP7.4□□□□□ -1.22
DDI3YNL335W TEC1P18412 486 aa7.4□□□□□ -1.22
DDI3YNL335W CPS1P27614 576 aa7.39□□□□□ -1.23
DDI3YNL335W SIS2P36024 562 aa7.39□□□□□ -1.23
DDI3YNL335W TTI1P36097 1038 aa7.39□□□□□ -1.23
DDI3YNL335W TPD3P31383 635 aa7.38□□□□□ -1.23
DDI3YNL335W BCK2P33306 851 aa7.38□□□□□ -1.23
DDI3YNL335W RRD1P40454 393 aaKnown RBP7.38□□□□□ -1.23
DDI3YNL335W MRX10Q05648 414 aa7.38□□□□□ -1.23
DDI3YNL335W GUT2P32191 649 aa7.37□□□□□ -1.23
DDI3YNL335W FIG4P42837 879 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms