RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A TYW1Q08960 810 aaKnown RBP6.82□□□□□ -1.32
YSF3YNL138W-A ISM1P48526 1002 aa6.81□□□□□ -1.32
YSF3YNL138W-A YMR196WQ04336 1088 aa6.81□□□□□ -1.32
YSF3YNL138W-A SIT4P20604 311 aa6.8□□□□□ -1.32
YSF3YNL138W-A SCJ1P25303 377 aa6.8□□□□□ -1.32
YSF3YNL138W-A KTR1P27810 393 aaKnown RBP6.8□□□□□ -1.32
YSF3YNL138W-A CSN12P47130 423 aa6.8□□□□□ -1.32
YSF3YNL138W-A ECM5Q03214 1411 aa6.8□□□□□ -1.32
YSF3YNL138W-A ERF2Q06551 359 aa6.8□□□□□ -1.32
YSF3YNL138W-A KEX2P13134 814 aa6.79□□□□□ -1.32
YSF3YNL138W-A NPL4P33755 580 aa6.79□□□□□ -1.32
YSF3YNL138W-A DMA2P53924 522 aa6.79□□□□□ -1.32
YSF3YNL138W-A YML082WQ04533 649 aaKnown RBP6.79□□□□□ -1.32
YSF3YNL138W-A HSL1P34244 1518 aa6.78□□□□□ -1.32
YSF3YNL138W-A BUD20Q08004 166 aaPredicted RBP6.78□□□□□ -1.32
YSF3YNL138W-A BCK2P33306 851 aa6.77□□□□□ -1.33
YSF3YNL138W-A HST2P53686 357 aa6.77□□□□□ -1.33
YSF3YNL138W-A GLN1P32288 370 aaKnown RBP6.76□□□□□ -1.33
YSF3YNL138W-A GCD11P32481 527 aaKnown RBP6.76□□□□□ -1.33
YSF3YNL138W-A MMP1Q12372 583 aa6.76□□□□□ -1.33
YSF3YNL138W-A SPT6P23615 1451 aaKnown RBP6.76□□□□□ -1.33
YSF3YNL138W-A ESS1P22696 170 aa6.75□□□□□ -1.33
YSF3YNL138W-A YNL115CP53925 644 aa6.75□□□□□ -1.33
YSF3YNL138W-A TY1A-DR4O74302 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-HP0C2I4 478 aaKnown RBP6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-AP0CX57 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-PR1P0CX58 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-ORP0CX59 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-PR2P0CX60 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-DR5P0CX65 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-ER2P0CX66 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-GR3P0CX67 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-LR1P0CX68 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-MR2P0CX69 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A VRP1P37370 817 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-JR2P47099 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-DR1Q03856 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-ML1Q04706 440 aaKnown RBP6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-BRQ12217 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-NL2Q12470 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A TY1A-GR2Q12485 440 aa6.74□□□□□ -1.33
YSF3YNL138W-A SEC2P17065 759 aa6.73□□□□□ -1.33
YSF3YNL138W-A SLY41P22215 453 aa6.73□□□□□ -1.33
YSF3YNL138W-A RTF1P53064 558 aa6.73□□□□□ -1.33
YSF3YNL138W-A YJU3P28321 313 aa6.72□□□□□ -1.33
YSF3YNL138W-A HPC2Q01448 625 aa6.72□□□□□ -1.33
YSF3YNL138W-A MDS3P53094 1487 aa6.72□□□□□ -1.33
YSF3YNL138W-A PRT1P06103 763 aaKnown RBP6.71□□□□□ -1.34
YSF3YNL138W-A SSA2P10592 639 aaKnown RBP6.71□□□□□ -1.34
YSF3YNL138W-A TFB3Q03290 321 aa6.71□□□□□ -1.34
YSF3YNL138W-A PKH3Q03306 898 aaPredicted RBP6.71□□□□□ -1.34
YSF3YNL138W-A THO2P53552 1597 aaKnown RBP6.7□□□□□ -1.34
YSF3YNL138W-A REV3P14284 1504 aa6.7□□□□□ -1.34
YSF3YNL138W-A BUD4P47136 1447 aa6.68□□□□□ -1.34
YSF3YNL138W-A PKC1P24583 1151 aa6.68□□□□□ -1.34
YSF3YNL138W-A GYP1Q08484 637 aa6.68□□□□□ -1.34
YSF3YNL138W-A AGE1Q04412 482 aa6.67□□□□□ -1.34
YSF3YNL138W-A BRL1P38770 471 aa6.66□□□□□ -1.34
YSF3YNL138W-A XDJ1P39102 459 aa6.66□□□□□ -1.34
YSF3YNL138W-A RRN7P40992 514 aa6.66□□□□□ -1.34
YSF3YNL138W-A TUB4P53378 473 aa6.66□□□□□ -1.34
YSF3YNL138W-A RAD59Q12223 238 aa6.66□□□□□ -1.34
YSF3YNL138W-A TRM1P15565 570 aaKnown RBP6.65□□□□□ -1.34
YSF3YNL138W-A ARG8P18544 423 aa6.65□□□□□ -1.34
YSF3YNL138W-A RSC30P38781 883 aa6.64□□□□□ -1.35
YSF3YNL138W-A PAC1P39946 494 aaKnown RBP6.64□□□□□ -1.35
YSF3YNL138W-A PUS6P53294 404 aa6.64□□□□□ -1.35
YSF3YNL138W-A SAS4Q04003 481 aa6.63□□□□□ -1.35
YSF3YNL138W-A SPT16P32558 1035 aaKnown RBP6.62□□□□□ -1.35
YSF3YNL138W-A HGH1P48362 394 aaKnown RBP6.62□□□□□ -1.35
YSF3YNL138W-A LAM6Q08001 693 aa6.62□□□□□ -1.35
YSF3YNL138W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
YSF3YNL138W-A TBF1Q02457 562 aa6.61□□□□□ -1.35
YSF3YNL138W-A HIR3P47171 1648 aa6.6□□□□□ -1.35
YSF3YNL138W-A PEP1P32319 1579 aa6.6□□□□□ -1.35
YSF3YNL138W-A SDH2P21801 266 aa6.59□□□□□ -1.35
YSF3YNL138W-A PAT1P25644 796 aaKnown RBP6.59□□□□□ -1.35
YSF3YNL138W-A YDL206WQ12424 762 aa6.59□□□□□ -1.35
YSF3YNL138W-A YBL036CP38197 257 aa6.58□□□□□ -1.36
YSF3YNL138W-A YJL007CP47080 104 aa6.57□□□□□ -1.36
YSF3YNL138W-A BPT1P14772 1559 aa6.57□□□□□ -1.36
YSF3YNL138W-A PDC1P06169 563 aaKnown RBP6.55□□□□□ -1.36
YSF3YNL138W-A RPA14P50106 137 aa6.55□□□□□ -1.36
YSF3YNL138W-A SGS1P35187 1447 aa6.55□□□□□ -1.36
YSF3YNL138W-A ERG12P07277 443 aa6.54□□□□□ -1.36
YSF3YNL138W-A MRF1P30775 413 aaPredicted RBP6.54□□□□□ -1.36
YSF3YNL138W-A KXD1P53158 218 aa6.54□□□□□ -1.36
YSF3YNL138W-A BIO2P32451 375 aa6.53□□□□□ -1.36
YSF3YNL138W-A BIM1P40013 344 aa6.53□□□□□ -1.36
YSF3YNL138W-A TAF7Q05021 590 aa6.53□□□□□ -1.36
YSF3YNL138W-A YPR097WQ06839 1073 aa6.53□□□□□ -1.36
YSF3YNL138W-A MOD5P07884 428 aa6.52□□□□□ -1.37
YSF3YNL138W-A MAK16P10962 306 aaPredicted RBP6.52□□□□□ -1.37
YSF3YNL138W-A CSE4P36012 229 aa6.52□□□□□ -1.37
YSF3YNL138W-A ALR1Q08269 859 aa6.52□□□□□ -1.37
YSF3YNL138W-A ATG32P40458 529 aa6.51□□□□□ -1.37
YSF3YNL138W-A CST6P40535 587 aa6.51□□□□□ -1.37
YSF3YNL138W-A HXT10P43581 546 aa6.5□□□□□ -1.37
YSF3YNL138W-A YNL108CP53929 270 aa6.5□□□□□ -1.37
YSF3YNL138W-A DPS1P04802 557 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms