RNA–Protein interactions for RNA: YNL104C

LEU4, Transcript of Alpha-isopropylmalate synthase (2-isopropylmalate synthase), yeast

Gene LEU4, Length 1,860 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU4	YNL104C	YRB30	P53107	440 aa	Predicted RBP	10.64	□□□□□ -0.71
LEU4	YNL104C	SUI2	P20459	304 aa	Known RBP	10.63	□□□□□ -0.71
LEU4	YNL104C	URN1	Q06525	465 aa	Known RBP	10.63	□□□□□ -0.71
LEU4	YNL104C	FPR3	P38911	411 aa	Known RBP	10.61	□□□□□ -0.71
LEU4	YNL104C	IME2	P32581	645 aa		10.61	□□□□□ -0.71
LEU4	YNL104C	CAB1	Q04430	367 aa		10.6	□□□□□ -0.71
LEU4	YNL104C	YML133C	Q03099	1374 aa		10.6	□□□□□ -0.71
LEU4	YNL104C	YLL067C	Q07888	1374 aa		10.6	□□□□□ -0.71
LEU4	YNL104C	YLL066C	Q99208	1374 aa		10.6	□□□□□ -0.71
LEU4	YNL104C	OPY1	P38271	328 aa		10.59	□□□□□ -0.71
LEU4	YNL104C	MPP10	P47083	593 aa	Known RBP	10.59	□□□□□ -0.71
LEU4	YNL104C	SNF2	P22082	1703 aa		10.57	□□□□□ -0.72
LEU4	YNL104C	NAP1	P25293	417 aa	Known RBP	10.57	□□□□□ -0.72
LEU4	YNL104C	RRP46	P53256	223 aa	Predicted RBP	10.56	□□□□□ -0.72
LEU4	YNL104C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	10.56	□□□□□ -0.72	not detected
LEU4	YNL104C	BNI1	P41832	1953 aa		10.55	□□□□□ -0.72
LEU4	YNL104C	ITT1	Q04638	464 aa		10.54	□□□□□ -0.72
LEU4	YNL104C	YFR016C	P43597	1233 aa	Known RBP	10.53	□□□□□ -0.72
LEU4	YNL104C	ABP1	P15891	592 aa	Known RBP	10.52	□□□□□ -0.73
LEU4	YNL104C	RTR1	P40084	226 aa	Predicted RBP	10.51	□□□□□ -0.73
LEU4	YNL104C	SAP155	P43612	1002 aa		10.51	□□□□□ -0.73
LEU4	YNL104C	YIR014W	P40570	242 aa		10.49	□□□□□ -0.73
LEU4	YNL104C	HAP1	P0CE41	1502 aa		10.48	□□□□□ -0.73
LEU4	YNL104C	KRE5	P22023	1365 aa		10.47	□□□□□ -0.73
LEU4	YNL104C	YPR148C	Q06523	435 aa		10.47	□□□□□ -0.73
LEU4	YNL104C	RAD2	P07276	1031 aa		10.47	□□□□□ -0.73
LEU4	YNL104C	CLC1	P17891	233 aa		10.47	□□□□□ -0.73
LEU4	YNL104C	PSK1	P31374	1356 aa		10.46	□□□□□ -0.73
LEU4	YNL104C	KAR2	P16474	682 aa	Known RBP	10.46	□□□□□ -0.74
LEU4	YNL104C	THI22	Q06490	572 aa		10.46	□□□□□ -0.74
LEU4	YNL104C	PRD1	P25375	712 aa		10.45	□□□□□ -0.74
LEU4	YNL104C	TAP42	Q04372	366 aa		10.45	□□□□□ -0.74
LEU4	YNL104C	TPD3	P31383	635 aa		10.44	□□□□□ -0.74
LEU4	YNL104C	PPH3	P32345	308 aa		10.44	□□□□□ -0.74
LEU4	YNL104C	RCM1	P53972	490 aa		10.44	□□□□□ -0.74
LEU4	YNL104C	YIL092W	P40497	633 aa		10.44	□□□□□ -0.74
LEU4	YNL104C	HEF3	P53978	1044 aa	Known RBP	10.43	□□□□□ -0.74
LEU4	YNL104C	MRX12	P47084	519 aa		10.42	□□□□□ -0.74
LEU4	YNL104C	EAF7	P53911	425 aa	Known RBP	10.42	□□□□□ -0.74
LEU4	YNL104C	HIM1	Q06674	414 aa		10.42	□□□□□ -0.74
LEU4	YNL104C	DNF3	Q12674	1656 aa		10.42	□□□□□ -0.74
LEU4	YNL104C	DAL5	P15365	543 aa		10.41	□□□□□ -0.74
LEU4	YNL104C	PDI1	P17967	522 aa	Known RBP	10.4	□□□□□ -0.74
LEU4	YNL104C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	10.4	□□□□□ -0.74	not detected
LEU4	YNL104C	AUS1	Q08409	1394 aa		10.4	□□□□□ -0.74
LEU4	YNL104C	POL32	P47110	350 aa		10.39	□□□□□ -0.75
LEU4	YNL104C	PAP2	P53632	584 aa	Known RBP	10.39	□□□□□ -0.75
LEU4	YNL104C	LEU2	P04173	364 aa	Predicted RBP	10.38	□□□□□ -0.75
LEU4	YNL104C	CSE4	P36012	229 aa		10.38	□□□□□ -0.75
LEU4	YNL104C	RIA1	P53893	1110 aa		10.38	□□□□□ -0.75
LEU4	YNL104C	RTT109	Q07794	436 aa		10.37	□□□□□ -0.75
LEU4	YNL104C	SIR4	P11978	1358 aa		10.37	□□□□□ -0.75
LEU4	YNL104C	GRX4	P32642	244 aa		10.36	□□□□□ -0.75
LEU4	YNL104C	SNF7	P39929	240 aa	Known RBP	10.36	□□□□□ -0.75
LEU4	YNL104C	CPS1	P27614	576 aa		10.34	□□□□□ -0.75
LEU4	YNL104C	RTF1	P53064	558 aa		10.34	□□□□□ -0.75
LEU4	YNL104C	MTR4	P47047	1073 aa	Known RBP	10.34	□□□□□ -0.75
LEU4	YNL104C	MAK21	Q12176	1025 aa	Known RBP	10.33	□□□□□ -0.76
LEU4	YNL104C	PCT1	P13259	424 aa		10.32	□□□□□ -0.76
LEU4	YNL104C	YRF1-4	O13559	1382 aa		10.32	□□□□□ -0.76
LEU4	YNL104C	PUF6	Q04373	656 aa	Known RBP	10.31	□□□□□ -0.76
LEU4	YNL104C	ROX1	P25042	368 aa		10.3	□□□□□ -0.76
LEU4	YNL104C	USO1	P25386	1790 aa		10.29	□□□□□ -0.76
LEU4	YNL104C	RPO41	P13433	1351 aa	Known RBP	10.28	□□□□□ -0.76
LEU4	YNL104C	CAB3	P36076	571 aa		10.27	□□□□□ -0.77
LEU4	YNL104C	YNR029C	P53729	429 aa	Known RBP	10.27	□□□□□ -0.77
LEU4	YNL104C	MIF2	P35201	549 aa		10.26	□□□□□ -0.77
LEU4	YNL104C	GAS4	Q08271	471 aa		10.26	□□□□□ -0.77
LEU4	YNL104C	PRP43	P53131	767 aa	Known RBP	10.25	□□□□□ -0.77
LEU4	YNL104C	RPS24A	P0CX31	135 aa	Known RBP	10.25	□□□□□ -0.77
LEU4	YNL104C	RPS24B	P0CX32	135 aa	Known RBP	10.25	□□□□□ -0.77
LEU4	YNL104C	DJP1	P40564	432 aa		10.25	□□□□□ -0.77
LEU4	YNL104C	TY1B-NL2	Q99337	1749 aa	Known RBP	10.24	□□□□□ -0.77
LEU4	YNL104C	TRP5	P00931	707 aa	Known RBP	10.23	□□□□□ -0.77
LEU4	YNL104C	VPS24	P36095	224 aa	Known RBP	10.23	□□□□□ -0.77
LEU4	YNL104C	AKL1	P38080	1108 aa	Known RBP	10.23	□□□□□ -0.77
LEU4	YNL104C	ADE6	P38972	1358 aa	Known RBP	10.23	□□□□□ -0.77
LEU4	YNL104C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.23	□□□□□ -0.77	not detected
LEU4	YNL104C	APC1	P53886	1748 aa		10.22	□□□□□ -0.77
LEU4	YNL104C	DSD1	P53095	428 aa		10.22	□□□□□ -0.77
LEU4	YNL104C	MAK10	Q02197	733 aa		10.22	□□□□□ -0.77
LEU4	YNL104C	DPS1	P04802	557 aa	Known RBP	10.21	□□□□□ -0.78
LEU4	YNL104C	GYP7	P48365	746 aa		10.21	□□□□□ -0.78
LEU4	YNL104C	ILV3	P39522	585 aa	Known RBP	10.2	□□□□□ -0.78
LEU4	YNL104C	SLN1	P39928	1220 aa	Predicted RBP	10.2	□□□□□ -0.78
LEU4	YNL104C	YNL050C	P53952	270 aa		10.2	□□□□□ -0.78
LEU4	YNL104C	LSP1	Q12230	341 aa	Known RBP	10.19	□□□□□ -0.78
LEU4	YNL104C	RLF2	Q12495	606 aa		10.19	□□□□□ -0.78
LEU4	YNL104C	MSP1	P28737	362 aa		10.19	□□□□□ -0.78
LEU4	YNL104C	RRT14	P40470	206 aa		10.19	□□□□□ -0.78
LEU4	YNL104C	EBP2	P36049	427 aa	Known RBP	10.18	□□□□□ -0.78
LEU4	YNL104C	ECM16	Q04217	1267 aa	Known RBP	10.18	□□□□□ -0.78
LEU4	YNL104C	SRT1	Q03175	343 aa		10.17	□□□□□ -0.78
LEU4	YNL104C	ZDS1	P50111	915 aa	Known RBP	10.17	□□□□□ -0.78
LEU4	YNL104C	NTH2	P35172	780 aa		10.16	□□□□□ -0.78
LEU4	YNL104C	MAM1	P40065	302 aa		10.16	□□□□□ -0.78
LEU4	YNL104C	CSI1	Q04368	295 aa		10.14	□□□□□ -0.79
LEU4	YNL104C	NKP2	Q06162	153 aa		10.14	□□□□□ -0.79
LEU4	YNL104C	YPP1	P46951	817 aa		10.13	□□□□□ -0.79
LEU4	YNL104C	YNG2	P38806	282 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms