RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C HED1Q03937 162 aa6.92□□□□□ -1.3
YMR046CYMR046C TY1A-DR4O74302 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-HP0C2I4 478 aaKnown RBP6.91□□□□□ -1.3
YMR046CYMR046C TY1A-AP0CX57 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-PR1P0CX58 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-ORP0CX59 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-PR2P0CX60 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-DR5P0CX65 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-ER2P0CX66 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-GR3P0CX67 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-LR1P0CX68 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-MR2P0CX69 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-JR2P47099 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-DR1Q03856 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-ML1Q04706 440 aaKnown RBP6.91□□□□□ -1.3
YMR046CYMR046C TY1A-BRQ12217 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-NL2Q12470 440 aa6.91□□□□□ -1.3
YMR046CYMR046C TY1A-GR2Q12485 440 aa6.91□□□□□ -1.3
YMR046CYMR046C GAP1P19145 602 aaPredicted RBP6.9□□□□□ -1.3
YMR046CYMR046C YDL176WQ12027 708 aa6.9□□□□□ -1.3
YMR046CYMR046C RRN7P40992 514 aa6.89□□□□□ -1.31
YMR046CYMR046C YDR090CQ03193 310 aa6.89□□□□□ -1.31
YMR046CYMR046C LCB5Q06147 687 aaKnown RBP6.89□□□□□ -1.31
YMR046CYMR046C PAT1P25644 796 aaKnown RBP6.88□□□□□ -1.31
YMR046CYMR046C CKB1P43639 278 aa6.86□□□□□ -1.31
YMR046CYMR046C ASH1P34233 588 aa6.85□□□□□ -1.31
YMR046CYMR046C MTC5Q03897 1148 aa6.85□□□□□ -1.31
YMR046CYMR046C SPB4P25808 606 aaPredicted RBP6.81□□□□□ -1.32
YMR046CYMR046C HST3P53687 447 aa6.81□□□□□ -1.32
YMR046CYMR046C LEU3P08638 886 aa6.79□□□□□ -1.32
YMR046CYMR046C AFT1P22149 690 aa6.79□□□□□ -1.32
YMR046CYMR046C MET32Q12041 191 aa6.79□□□□□ -1.32
YMR046CYMR046C RRD1P40454 393 aaKnown RBP6.78□□□□□ -1.32
YMR046CYMR046C REF2P42073 533 aaPredicted RBP6.76□□□□□ -1.33
YMR046CYMR046C PBS2P08018 668 aa6.76□□□□□ -1.33
YMR046CYMR046C ORC6P38826 435 aa6.75□□□□□ -1.33
YMR046CYMR046C LEO1P38439 464 aa6.73□□□□□ -1.33
YMR046CYMR046C MVP1P40959 511 aaKnown RBP6.73□□□□□ -1.33
YMR046CYMR046C YJR115WP47152 169 aa6.72□□□□□ -1.33
YMR046CYMR046C YPR109WQ06104 294 aa6.72□□□□□ -1.33
YMR046CYMR046C DSF2P38213 736 aa6.71□□□□□ -1.34
YMR046CYMR046C CAF120P53836 1060 aa6.7□□□□□ -1.34
YMR046CYMR046C PUS5Q06244 254 aa6.7□□□□□ -1.34
YMR046CYMR046C KEX2P13134 814 aa6.68□□□□□ -1.34
YMR046CYMR046C ERF2Q06551 359 aa6.68□□□□□ -1.34
YMR046CYMR046C MOD5P07884 428 aa6.67□□□□□ -1.34
YMR046CYMR046C MAM3Q12296 706 aa6.67□□□□□ -1.34
YMR046CYMR046C COX6P00427 148 aa6.66□□□□□ -1.34
YMR046CYMR046C TRK2P28584 889 aa6.66□□□□□ -1.34
YMR046CYMR046C PAC1P39946 494 aaKnown RBP6.66□□□□□ -1.34
YMR046CYMR046C MAK21Q12176 1025 aaKnown RBP6.66□□□□□ -1.34
YMR046CYMR046C RGR1P19263 1082 aa6.64□□□□□ -1.35
YMR046CYMR046C RPN1P38764 993 aaKnown RBP6.64□□□□□ -1.35
YMR046CYMR046C ACO2P39533 789 aa6.63□□□□□ -1.35
YMR046CYMR046C IES2P40154 320 aa6.63□□□□□ -1.35
YMR046CYMR046C NUP42P49686 430 aaKnown RBP6.59□□□□□ -1.35
YMR046CYMR046C YGR035CP53222 116 aa6.59□□□□□ -1.35
YMR046CYMR046C DIT2P21595 489 aa6.58□□□□□ -1.36
YMR046CYMR046C MSB3P48566 633 aaPredicted RBP6.57□□□□□ -1.36
YMR046CYMR046C YNR021WP53723 404 aaKnown RBP6.57□□□□□ -1.36
YMR046CYMR046C YLR346CQ06139 101 aa6.57□□□□□ -1.36
YMR046CYMR046C OPT2Q06593 877 aa6.57□□□□□ -1.36
YMR046CYMR046C TUB4P53378 473 aa6.56□□□□□ -1.36
YMR046CYMR046C UGA3P26370 528 aa6.54□□□□□ -1.36
YMR046CYMR046C AGE1Q04412 482 aa6.54□□□□□ -1.36
YMR046CYMR046C SRF1Q12516 437 aa6.54□□□□□ -1.36
YMR046CYMR046C GLC3P32775 704 aa6.53□□□□□ -1.36
YMR046CYMR046C HPF1Q05164 967 aa6.52□□□□□ -1.37
YMR046CYMR046C PTK2P47116 818 aaKnown RBP6.5□□□□□ -1.37
YMR046CYMR046C YIR007WP40566 764 aa6.5□□□□□ -1.37
YMR046CYMR046C SYH1Q02875 849 aaKnown RBP6.5□□□□□ -1.37
YMR046CYMR046C ATF2P53296 535 aa6.49□□□□□ -1.37
YMR046CYMR046C AIM7Q12156 149 aa6.49□□□□□ -1.37
YMR046CYMR046C KIN1P13185 1064 aa6.48□□□□□ -1.37
YMR046CYMR046C PSE1P32337 1089 aaKnown RBP6.48□□□□□ -1.37
YMR046CYMR046C GLY1P37303 387 aaKnown RBP6.47□□□□□ -1.37
YMR046CYMR046C ICP55P40051 511 aa6.47□□□□□ -1.37
YMR046CYMR046C KXD1P53158 218 aa6.47□□□□□ -1.37
YMR046CYMR046C SCW11P53189 542 aa6.46□□□□□ -1.38
YMR046CYMR046C TYW1Q08960 810 aaKnown RBP6.46□□□□□ -1.38
YMR046CYMR046C LSB3P43603 459 aaKnown RBP6.44□□□□□ -1.38
YMR046CYMR046C NUP85P46673 744 aa6.43□□□□□ -1.38
YMR046CYMR046C PUS1Q12211 544 aaKnown RBP6.43□□□□□ -1.38
YMR046CYMR046C MIP1P15801 1254 aa6.42□□□□□ -1.38
YMR046CYMR046C TPD3P31383 635 aa6.42□□□□□ -1.38
YMR046CYMR046C HXT10P43581 546 aa6.42□□□□□ -1.38
YMR046CYMR046C RTF1P53064 558 aa6.42□□□□□ -1.38
YMR046CYMR046C YNL115CP53925 644 aa6.42□□□□□ -1.38
YMR046CYMR046C YPR204WQ08995 1032 aa6.42□□□□□ -1.38
YMR046CYMR046C TY1A-BLQ12266 440 aa6.42□□□□□ -1.38
YMR046CYMR046C TEA1P47988 759 aa6.39□□□□□ -1.39
YMR046CYMR046C DMA2P53924 522 aa6.38□□□□□ -1.39
YMR046CYMR046C KIP2P28743 706 aa6.37□□□□□ -1.39
YMR046CYMR046C CLB5P30283 435 aa6.37□□□□□ -1.39
YMR046CYMR046C GUA1P38625 525 aaKnown RBP6.35□□□□□ -1.39
YMR046CYMR046C TAF7Q05021 590 aa6.35□□□□□ -1.39
YMR046CYMR046C PDC1P06169 563 aaKnown RBP6.34□□□□□ -1.39
YMR046CYMR046C NRD1P53617 575 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
YMR046CYMR046C UBP2Q01476 1272 aa6.32□□□□□ -1.4
YMR046CYMR046C IXR1P33417 597 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 117.5 ms