RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W RTF1P53064 558 aa10.2□□□□□ -0.78
TAF4YMR005W YPR015CQ12531 247 aa10.2□□□□□ -0.78
TAF4YMR005W TYW1Q08960 810 aaKnown RBP10.19□□□□□ -0.78
TAF4YMR005W KEX2P13134 814 aa10.18□□□□□ -0.78
TAF4YMR005W YNL115CP53925 644 aa10.18□□□□□ -0.78
TAF4YMR005W HPC2Q01448 625 aa10.18□□□□□ -0.78
TAF4YMR005W MMP1Q12372 583 aa10.18□□□□□ -0.78
TAF4YMR005W KTR1P27810 393 aaKnown RBP10.17□□□□□ -0.78
TAF4YMR005W DMA2P53924 522 aa10.16□□□□□ -0.78
TAF4YMR005W BUD20Q08004 166 aaPredicted RBP10.16□□□□□ -0.78
TAF4YMR005W SCJ1P25303 377 aa10.15□□□□□ -0.78
TAF4YMR005W GCD11P32481 527 aaKnown RBP10.14□□□□□ -0.79
TAF4YMR005W ERF2Q06551 359 aa10.14□□□□□ -0.79
TAF4YMR005W SLY41P22215 453 aa10.13□□□□□ -0.79
TAF4YMR005W HGH1P48362 394 aaKnown RBP10.13□□□□□ -0.79
TAF4YMR005W ESS1P22696 170 aa10.12□□□□□ -0.79
TAF4YMR005W TY1A-DR4O74302 440 aa10.11□□□□□ -0.79
TAF4YMR005W PRT1P06103 763 aaKnown RBP10.11□□□□□ -0.79
TAF4YMR005W TY1A-HP0C2I4 478 aaKnown RBP10.11□□□□□ -0.79
TAF4YMR005W TY1A-AP0CX57 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-PR1P0CX58 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-ORP0CX59 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-PR2P0CX60 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-DR5P0CX65 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-ER2P0CX66 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-GR3P0CX67 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-LR1P0CX68 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-MR2P0CX69 440 aa10.11□□□□□ -0.79
TAF4YMR005W VRP1P37370 817 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-JR2P47099 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-DR1Q03856 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-ML1Q04706 440 aaKnown RBP10.11□□□□□ -0.79
TAF4YMR005W TY1A-BRQ12217 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-NL2Q12470 440 aa10.11□□□□□ -0.79
TAF4YMR005W TY1A-GR2Q12485 440 aa10.11□□□□□ -0.79
TAF4YMR005W BRL1P38770 471 aa10.1□□□□□ -0.79
TAF4YMR005W PKH3Q03306 898 aaPredicted RBP10.09□□□□□ -0.79
TAF4YMR005W SEC2P17065 759 aa10.08□□□□□ -0.8
TAF4YMR005W BCK2P33306 851 aa10.08□□□□□ -0.8
TAF4YMR005W TFB3Q03290 321 aa10.08□□□□□ -0.8
TAF4YMR005W GYP1Q08484 637 aa10.07□□□□□ -0.8
TAF4YMR005W YJU3P28321 313 aa10.06□□□□□ -0.8
TAF4YMR005W SAS4Q04003 481 aa10.05□□□□□ -0.8
TAF4YMR005W RAD59Q12223 238 aa10.03□□□□□ -0.8
TAF4YMR005W PUS6P53294 404 aa10.02□□□□□ -0.81
TAF4YMR005W LAM6Q08001 693 aa10.02□□□□□ -0.81
TAF4YMR005W TRM1P15565 570 aaKnown RBP10.01□□□□□ -0.81
TAF4YMR005W ARG8P18544 423 aa10.01□□□□□ -0.81
TAF4YMR005W PAT1P25644 796 aaKnown RBP10.01□□□□□ -0.81
TAF4YMR005W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
TAF4YMR005W TUB4P53378 473 aa10.01□□□□□ -0.81
TAF4YMR005W AGE1Q04412 482 aa10.01□□□□□ -0.81
TAF4YMR005W RRN7P40992 514 aa10□□□□□ -0.81
TAF4YMR005W TBF1Q02457 562 aa10□□□□□ -0.81
TAF4YMR005W SPT16P32558 1035 aaKnown RBP9.99□□□□□ -0.81
TAF4YMR005W PKC1P24583 1151 aa9.98□□□□□ -0.81
TAF4YMR005W RSC30P38781 883 aa9.97□□□□□ -0.81
TAF4YMR005W XDJ1P39102 459 aa9.95□□□□□ -0.82
TAF4YMR005W PAC1P39946 494 aaKnown RBP9.95□□□□□ -0.82
TAF4YMR005W TAF7Q05021 590 aa9.95□□□□□ -0.82
TAF4YMR005W MRF1P30775 413 aaPredicted RBP9.93□□□□□ -0.82
TAF4YMR005W YBL036CP38197 257 aa9.93□□□□□ -0.82
TAF4YMR005W YDL206WQ12424 762 aa9.93□□□□□ -0.82
TAF4YMR005W CSE4P36012 229 aa9.91□□□□□ -0.82
TAF4YMR005W RPA14P50106 137 aa9.9□□□□□ -0.82
TAF4YMR005W KXD1P53158 218 aa9.89□□□□□ -0.83
TAF4YMR005W ERG12P07277 443 aa9.88□□□□□ -0.83
TAF4YMR005W ALR1Q08269 859 aa9.88□□□□□ -0.83
TAF4YMR005W PDC1P06169 563 aaKnown RBP9.86□□□□□ -0.83
TAF4YMR005W MAK16P10962 306 aaPredicted RBP9.86□□□□□ -0.83
TAF4YMR005W SDH2P21801 266 aa9.86□□□□□ -0.83
TAF4YMR005W YPR097WQ06839 1073 aa9.86□□□□□ -0.83
TAF4YMR005W YJL007CP47080 104 aa9.85□□□□□ -0.83
TAF4YMR005W MOD5P07884 428 aa9.82□□□□□ -0.84
TAF4YMR005W HXT10P43581 546 aa9.82□□□□□ -0.84
TAF4YMR005W YEL077CQ3E7X8 1277 aa9.82□□□□□ -0.84
TAF4YMR005W SPT5P27692 1063 aaKnown RBP9.81□□□□□ -0.84
TAF4YMR005W TPD3P31383 635 aa9.81□□□□□ -0.84
TAF4YMR005W BIO2P32451 375 aa9.81□□□□□ -0.84
TAF4YMR005W BIM1P40013 344 aa9.81□□□□□ -0.84
TAF4YMR005W RRD1P40454 393 aaKnown RBP9.79□□□□□ -0.84
TAF4YMR005W NAF1P53919 492 aaKnown RBP9.78□□□□□ -0.84
TAF4YMR005W ATG32P40458 529 aa9.77□□□□□ -0.85
TAF4YMR005W AMS1P22855 1083 aa9.76□□□□□ -0.85
TAF4YMR005W RPL34BP40525 121 aaKnown RBP9.76□□□□□ -0.85
TAF4YMR005W BDP1P46678 594 aa9.76□□□□□ -0.85
TAF4YMR005W RLF2Q12495 606 aa9.76□□□□□ -0.85
TAF4YMR005W CST6P40535 587 aa9.75□□□□□ -0.85
TAF4YMR005W YNL108CP53929 270 aa9.74□□□□□ -0.85
TAF4YMR005W FRK1Q03002 865 aaPredicted RBP9.74□□□□□ -0.85
TAF4YMR005W TIF1P10081 395 aaKnown RBP9.72□□□□□ -0.85
TAF4YMR005W YDJ1P25491 409 aaKnown RBP9.72□□□□□ -0.85
TAF4YMR005W SUP45P12385 437 aaKnown RBP9.71□□□□□ -0.86
TAF4YMR005W TEC1P18412 486 aa9.7□□□□□ -0.86
TAF4YMR005W FIG4P42837 879 aa9.7□□□□□ -0.86
TAF4YMR005W DPS1P04802 557 aaKnown RBP9.68□□□□□ -0.86
TAF4YMR005W VAC17P25591 423 aa9.68□□□□□ -0.86
TAF4YMR005W PUS5Q06244 254 aa9.68□□□□□ -0.86
TAF4YMR005W ENO2P00925 437 aaKnown RBP9.67□□□□□ -0.86
TAF4YMR005W RAS1P01119 309 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms