RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W TY1A-PR1P0CX58 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-ORP0CX59 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-PR2P0CX60 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-DR5P0CX65 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-ER2P0CX66 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-GR3P0CX67 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-LR1P0CX68 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-MR2P0CX69 440 aa6.83□□□□□ -1.32
BER1YLR412W SEC2P17065 759 aa6.83□□□□□ -1.32
BER1YLR412W SPT16P32558 1035 aaKnown RBP6.83□□□□□ -1.32
BER1YLR412W TY1A-JR2P47099 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-DR1Q03856 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-ML1Q04706 440 aaKnown RBP6.83□□□□□ -1.32
BER1YLR412W TY1A-BRQ12217 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-NL2Q12470 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-GR2Q12485 440 aa6.83□□□□□ -1.32
BER1YLR412W NPL4P33755 580 aa6.82□□□□□ -1.32
BER1YLR412W GCD11P32481 527 aaKnown RBP6.81□□□□□ -1.32
BER1YLR412W FRK1Q03002 865 aaPredicted RBP6.8□□□□□ -1.32
BER1YLR412W HED1Q03937 162 aa6.79□□□□□ -1.32
BER1YLR412W MAK21Q12176 1025 aaKnown RBP6.79□□□□□ -1.32
BER1YLR412W COX6P00427 148 aa6.78□□□□□ -1.32
BER1YLR412W PBS2P08018 668 aa6.78□□□□□ -1.32
BER1YLR412W BDP1P46678 594 aa6.78□□□□□ -1.32
BER1YLR412W ORC6P38826 435 aa6.76□□□□□ -1.33
BER1YLR412W YDR444WQ04093 687 aa6.76□□□□□ -1.33
BER1YLR412W SPB4P25808 606 aaPredicted RBP6.75□□□□□ -1.33
BER1YLR412W PAT1P25644 796 aaKnown RBP6.72□□□□□ -1.33
BER1YLR412W RRN7P40992 514 aa6.72□□□□□ -1.33
BER1YLR412W YDL176WQ12027 708 aa6.72□□□□□ -1.33
BER1YLR412W LCB5Q06147 687 aaKnown RBP6.71□□□□□ -1.34
BER1YLR412W DSF2P38213 736 aa6.7□□□□□ -1.34
BER1YLR412W MVP1P40959 511 aaKnown RBP6.69□□□□□ -1.34
BER1YLR412W MAM3Q12296 706 aa6.69□□□□□ -1.34
BER1YLR412W ASH1P34233 588 aa6.67□□□□□ -1.34
BER1YLR412W AFT1P22149 690 aa6.66□□□□□ -1.34
BER1YLR412W MET32Q12041 191 aa6.66□□□□□ -1.34
BER1YLR412W IES2P40154 320 aa6.65□□□□□ -1.34
BER1YLR412W YPR109WQ06104 294 aa6.65□□□□□ -1.34
BER1YLR412W MOD5P07884 428 aa6.63□□□□□ -1.35
BER1YLR412W RGR1P19263 1082 aa6.62□□□□□ -1.35
BER1YLR412W RRD1P40454 393 aaKnown RBP6.61□□□□□ -1.35
BER1YLR412W HST3P53687 447 aa6.61□□□□□ -1.35
BER1YLR412W NUP42P49686 430 aaKnown RBP6.6□□□□□ -1.35
BER1YLR412W DIT2P21595 489 aa6.59□□□□□ -1.35
BER1YLR412W PSE1P32337 1089 aaKnown RBP6.59□□□□□ -1.35
BER1YLR412W ERF2Q06551 359 aa6.59□□□□□ -1.35
BER1YLR412W KEX2P13134 814 aa6.58□□□□□ -1.36
BER1YLR412W PAC1P39946 494 aaKnown RBP6.57□□□□□ -1.36
BER1YLR412W MTC5Q03897 1148 aa6.57□□□□□ -1.36
BER1YLR412W YJR115WP47152 169 aa6.55□□□□□ -1.36
BER1YLR412W AGE1Q04412 482 aa6.53□□□□□ -1.36
BER1YLR412W PUS5Q06244 254 aa6.53□□□□□ -1.36
BER1YLR412W ACO2P39533 789 aa6.52□□□□□ -1.37
BER1YLR412W CLB5P30283 435 aa6.51□□□□□ -1.37
BER1YLR412W TEA1P47988 759 aa6.49□□□□□ -1.37
BER1YLR412W TUB4P53378 473 aa6.49□□□□□ -1.37
BER1YLR412W YNR021WP53723 404 aaKnown RBP6.49□□□□□ -1.37
BER1YLR412W LEU3P08638 886 aa6.48□□□□□ -1.37
BER1YLR412W MSB3P48566 633 aaPredicted RBP6.48□□□□□ -1.37
BER1YLR412W GLC3P32775 704 aa6.47□□□□□ -1.37
BER1YLR412W CAF120P53836 1060 aa6.47□□□□□ -1.37
BER1YLR412W TPD3P31383 635 aa6.45□□□□□ -1.38
BER1YLR412W RTF1P53064 558 aa6.45□□□□□ -1.38
BER1YLR412W ATF2P53296 535 aa6.45□□□□□ -1.38
BER1YLR412W TRK2P28584 889 aa6.44□□□□□ -1.38
BER1YLR412W NIS1P53939 407 aa6.42□□□□□ -1.38
BER1YLR412W OPT2Q06593 877 aa6.41□□□□□ -1.38
BER1YLR412W SIT4P20604 311 aa6.4□□□□□ -1.38
BER1YLR412W YNL115CP53925 644 aa6.4□□□□□ -1.38
BER1YLR412W YLR346CQ06139 101 aa6.4□□□□□ -1.38
BER1YLR412W KXD1P53158 218 aa6.39□□□□□ -1.39
BER1YLR412W SYH1Q02875 849 aaKnown RBP6.39□□□□□ -1.39
BER1YLR412W PTK2P47116 818 aaKnown RBP6.38□□□□□ -1.39
BER1YLR412W YGR035CP53222 116 aa6.38□□□□□ -1.39
BER1YLR412W YMR196WQ04336 1088 aa6.38□□□□□ -1.39
BER1YLR412W AIM7Q12156 149 aa6.38□□□□□ -1.39
BER1YLR412W GLY1P37303 387 aaKnown RBP6.37□□□□□ -1.39
BER1YLR412W RPN1P38764 993 aaKnown RBP6.37□□□□□ -1.39
BER1YLR412W HXT10P43581 546 aa6.37□□□□□ -1.39
BER1YLR412W FPK1P53739 893 aa6.37□□□□□ -1.39
BER1YLR412W UGA3P26370 528 aa6.36□□□□□ -1.39
BER1YLR412W YIR007WP40566 764 aa6.34□□□□□ -1.39
BER1YLR412W HPF1Q05164 967 aa6.34□□□□□ -1.39
BER1YLR412W SRF1Q12516 437 aa6.34□□□□□ -1.39
BER1YLR412W KIN1P13185 1064 aa6.33□□□□□ -1.4
BER1YLR412W SLY41P22215 453 aa6.33□□□□□ -1.4
BER1YLR412W SCJ1P25303 377 aa6.33□□□□□ -1.4
BER1YLR412W NUP85P46673 744 aa6.33□□□□□ -1.4
BER1YLR412W PDC1P06169 563 aaKnown RBP6.32□□□□□ -1.4
BER1YLR412W HST2P53686 357 aa6.32□□□□□ -1.4
BER1YLR412W TYW1Q08960 810 aaKnown RBP6.31□□□□□ -1.4
BER1YLR412W RTT106P40161 455 aa6.3□□□□□ -1.4
BER1YLR412W TY1A-BLQ12266 440 aa6.3□□□□□ -1.4
BER1YLR412W MMP1Q12372 583 aa6.3□□□□□ -1.4
BER1YLR412W GLN1P32288 370 aaKnown RBP6.29□□□□□ -1.4
BER1YLR412W MRT4P33201 236 aaKnown RBP6.29□□□□□ -1.4
BER1YLR412W SCW11P53189 542 aa6.29□□□□□ -1.4
BER1YLR412W MIP1P15801 1254 aa6.27□□□□□ -1.41
BER1YLR412W ESS1P22696 170 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms