RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W PDR11P40550 1411 aa5.6□□□□□ -1.51
NUP2YLR335W SPE2P21182 396 aa5.59□□□□□ -1.51
NUP2YLR335W YIR014WP40570 242 aa5.59□□□□□ -1.51
NUP2YLR335W IML1P47170 1584 aa5.58□□□□□ -1.52
NUP2YLR335W OPY1P38271 328 aa5.57□□□□□ -1.52
NUP2YLR335W NST1P53935 1240 aa5.57□□□□□ -1.52
NUP2YLR335W TRM3Q07527 1436 aa5.57□□□□□ -1.52
NUP2YLR335W NUP188P52593 1655 aaKnown RBP5.56□□□□□ -1.52
NUP2YLR335W NAP1P25293 417 aaKnown RBP5.56□□□□□ -1.52
NUP2YLR335W FKH1P40466 484 aa5.56□□□□□ -1.52
NUP2YLR335W YDL144CQ07589 356 aa5.56□□□□□ -1.52
NUP2YLR335W EBP2P36049 427 aaKnown RBP5.56□□□□□ -1.52
NUP2YLR335W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
NUP2YLR335W URN1Q06525 465 aaKnown RBP5.55□□□□□ -1.52
NUP2YLR335W REB1P21538 810 aa5.55□□□□□ -1.52
NUP2YLR335W RTG3P38165 486 aa5.55□□□□□ -1.52
NUP2YLR335W YFR016CP43597 1233 aaKnown RBP5.55□□□□□ -1.52
NUP2YLR335W YPR148CQ06523 435 aa5.55□□□□□ -1.52
NUP2YLR335W DOP1Q03921 1698 aa5.54□□□□□ -1.52
NUP2YLR335W BUD27P43573 796 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
NUP2YLR335W NUP192P47054 1683 aa5.53□□□□□ -1.52
NUP2YLR335W DNF2Q12675 1612 aa5.53□□□□□ -1.52
NUP2YLR335W CHZ1P40019 153 aaPredicted RBP5.53□□□□□ -1.52
NUP2YLR335W SNF7P39929 240 aaKnown RBP5.52□□□□□ -1.53
NUP2YLR335W ALD4P46367 519 aaKnown RBP5.52□□□□□ -1.53
NUP2YLR335W RAD2P07276 1031 aa5.52□□□□□ -1.53
NUP2YLR335W SUI2P20459 304 aaKnown RBP5.52□□□□□ -1.53
NUP2YLR335W FUN12P39730 1002 aaKnown RBP5.52□□□□□ -1.53
NUP2YLR335W MNN4P36044 1178 aa5.5□□□□□ -1.53
NUP2YLR335W YAP3P38749 330 aa5.5□□□□□ -1.53
NUP2YLR335W TAF8Q03750 510 aa5.5□□□□□ -1.53
NUP2YLR335W MLP1Q02455 1875 aaKnown RBP5.5□□□□□ -1.53
NUP2YLR335W BCK1Q01389 1478 aa5.5□□□□□ -1.53
NUP2YLR335W YRF1-4O13559 1382 aa5.49□□□□□ -1.53
NUP2YLR335W YML133CQ03099 1374 aa5.49□□□□□ -1.53
NUP2YLR335W YLL067CQ07888 1374 aa5.49□□□□□ -1.53
NUP2YLR335W YLL066CQ99208 1374 aa5.49□□□□□ -1.53
NUP2YLR335W TRK1P12685 1235 aa5.49□□□□□ -1.53
NUP2YLR335W YEF3P16521 1044 aaKnown RBP5.49□□□□□ -1.53
NUP2YLR335W IPL1P38991 367 aa5.49□□□□□ -1.53
NUP2YLR335W SNF2P22082 1703 aa5.49□□□□□ -1.53
NUP2YLR335W MPP10P47083 593 aaKnown RBP5.48□□□□□ -1.53
NUP2YLR335W RTR1P40084 226 aaPredicted RBP5.48□□□□□ -1.53
NUP2YLR335W ROX1P25042 368 aa5.47□□□□□ -1.53
NUP2YLR335W TCB2P48231 1178 aa5.47□□□□□ -1.53
NUP2YLR335W KRE5P22023 1365 aa5.47□□□□□ -1.53
NUP2YLR335W SPT21P35209 758 aa5.46□□□□□ -1.53
NUP2YLR335W SAP155P43612 1002 aa5.46□□□□□ -1.53
NUP2YLR335W SIR4P11978 1358 aa5.46□□□□□ -1.53
NUP2YLR335W VPS24P36095 224 aaKnown RBP5.46□□□□□ -1.54
NUP2YLR335W TAP42Q04372 366 aa5.46□□□□□ -1.54
NUP2YLR335W MAK21Q12176 1025 aaKnown RBP5.46□□□□□ -1.54
NUP2YLR335W HAP1P0CE41 1502 aa5.45□□□□□ -1.54
NUP2YLR335W RAD9P14737 1309 aa5.45□□□□□ -1.54
NUP2YLR335W SIS1P25294 352 aaKnown RBP5.45□□□□□ -1.54
NUP2YLR335W ECM16Q04217 1267 aaKnown RBP5.45□□□□□ -1.54
NUP2YLR335W LSP1Q12230 341 aaKnown RBP5.45□□□□□ -1.54
NUP2YLR335W PCT1P13259 424 aa5.44□□□□□ -1.54
NUP2YLR335W KAR2P16474 682 aaKnown RBP5.44□□□□□ -1.54
NUP2YLR335W YIL092WP40497 633 aa5.44□□□□□ -1.54
NUP2YLR335W PRD1P25375 712 aa5.43□□□□□ -1.54
NUP2YLR335W RIM101P33400 625 aa5.43□□□□□ -1.54
NUP2YLR335W TYS1P36421 394 aaKnown RBP5.43□□□□□ -1.54
NUP2YLR335W PSK1P31374 1356 aa5.43□□□□□ -1.54
NUP2YLR335W GRX4P32642 244 aa5.43□□□□□ -1.54
NUP2YLR335W TPD3P31383 635 aa5.42□□□□□ -1.54
NUP2YLR335W POL32P47110 350 aa5.42□□□□□ -1.54
NUP2YLR335W RRP46P53256 223 aaPredicted RBP5.42□□□□□ -1.54
NUP2YLR335W PDI1P17967 522 aaKnown RBP5.42□□□□□ -1.54
NUP2YLR335W RTF1P53064 558 aa5.41□□□□□ -1.54
NUP2YLR335W CAB1Q04430 367 aa5.41□□□□□ -1.54
NUP2YLR335W THI22Q06490 572 aa5.41□□□□□ -1.54
NUP2YLR335W EDE1P34216 1381 aa5.41□□□□□ -1.54
NUP2YLR335W DAL5P15365 543 aa5.4□□□□□ -1.54
NUP2YLR335W HEF3P53978 1044 aaKnown RBP5.4□□□□□ -1.54
NUP2YLR335W DNF3Q12674 1656 aa5.4□□□□□ -1.54
NUP2YLR335W MSP1P28737 362 aa5.4□□□□□ -1.55
NUP2YLR335W NOT3P06102 836 aaKnown RBP5.39□□□□□ -1.55
NUP2YLR335W SLN1P39928 1220 aaPredicted RBP5.39□□□□□ -1.55
NUP2YLR335W PAP2P53632 584 aaKnown RBP5.39□□□□□ -1.55
NUP2YLR335W YFR006WP43590 535 aa5.38□□□□□ -1.55
NUP2YLR335W MRX12P47084 519 aa5.38□□□□□ -1.55
NUP2YLR335W LEU2P04173 364 aaPredicted RBP5.38□□□□□ -1.55
NUP2YLR335W ARL1P38116 183 aaKnown RBP5.37□□□□□ -1.55
NUP2YLR335W MTR4P47047 1073 aaKnown RBP5.37□□□□□ -1.55
NUP2YLR335W PUF6Q04373 656 aaKnown RBP5.37□□□□□ -1.55
NUP2YLR335W COG8Q04632 607 aa5.37□□□□□ -1.55
NUP2YLR335W DJP1P40564 432 aa5.36□□□□□ -1.55
NUP2YLR335W ITC1P53125 1264 aa5.36□□□□□ -1.55
NUP2YLR335W RTT109Q07794 436 aa5.36□□□□□ -1.55
NUP2YLR335W RPO41P13433 1351 aaKnown RBP5.35□□□□□ -1.55
NUP2YLR335W CSE4P36012 229 aa5.35□□□□□ -1.55
NUP2YLR335W PTP3P40048 928 aa5.35□□□□□ -1.55
NUP2YLR335W QCR6P00127 147 aa5.35□□□□□ -1.55
NUP2YLR335W DMA1P38823 416 aa5.34□□□□□ -1.55
NUP2YLR335W MAM1P40065 302 aa5.34□□□□□ -1.55
NUP2YLR335W HIM1Q06674 414 aa5.34□□□□□ -1.55
NUP2YLR335W TEA1P47988 759 aa5.33□□□□□ -1.56
NUP2YLR335W GYP7P48365 746 aa5.33□□□□□ -1.56
NUP2YLR335W PIL1P53252 339 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms