RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W GCD11P32481 527 aaKnown RBP3.4□□□□□ -1.86
SLX4YLR135W ISM1P48526 1002 aa3.39□□□□□ -1.87
SLX4YLR135W MET32Q12041 191 aa3.39□□□□□ -1.87
SLX4YLR135W YRR1Q12172 810 aa3.39□□□□□ -1.87
SLX4YLR135W STR2P47164 639 aa3.38□□□□□ -1.87
SLX4YLR135W SRF1Q12516 437 aa3.38□□□□□ -1.87
SLX4YLR135W DPH6Q12429 685 aa3.37□□□□□ -1.87
SLX4YLR135W NUD1P32336 851 aa3.36□□□□□ -1.87
SLX4YLR135W SCW11P53189 542 aa3.36□□□□□ -1.87
SLX4YLR135W YIR007WP40566 764 aa3.35□□□□□ -1.87
SLX4YLR135W OPT2Q06593 877 aa3.35□□□□□ -1.87
SLX4YLR135W GLY1P37303 387 aaKnown RBP3.35□□□□□ -1.87
SLX4YLR135W RRN7P40992 514 aa3.34□□□□□ -1.87
SLX4YLR135W NSG2P53898 299 aa3.32□□□□□ -1.88
SLX4YLR135W CCT8P47079 568 aaKnown RBP3.32□□□□□ -1.88
SLX4YLR135W MSB3P48566 633 aaPredicted RBP3.31□□□□□ -1.88
SLX4YLR135W TYW1Q08960 810 aaKnown RBP3.29□□□□□ -1.88
SLX4YLR135W UGA3P26370 528 aa3.29□□□□□ -1.88
SLX4YLR135W RAM2P29703 316 aa3.29□□□□□ -1.88
SLX4YLR135W RAD54P32863 898 aa3.29□□□□□ -1.88
SLX4YLR135W TFB4Q12004 338 aa3.29□□□□□ -1.88
SLX4YLR135W MIP1P15801 1254 aa3.28□□□□□ -1.88
SLX4YLR135W MDJ1P35191 511 aa3.27□□□□□ -1.89
SLX4YLR135W PTK2P47116 818 aaKnown RBP3.25□□□□□ -1.89
SLX4YLR135W LYS5P50113 272 aa3.25□□□□□ -1.89
SLX4YLR135W TUM1Q08686 304 aaKnown RBP3.25□□□□□ -1.89
SLX4YLR135W NUP85P46673 744 aa3.24□□□□□ -1.89
SLX4YLR135W CSC1Q06538 782 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-DR4O74302 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-HP0C2I4 478 aaKnown RBP3.24□□□□□ -1.89
SLX4YLR135W TY1A-AP0CX57 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-PR1P0CX58 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-ORP0CX59 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-PR2P0CX60 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-DR5P0CX65 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-ER2P0CX66 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-GR3P0CX67 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-LR1P0CX68 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-MR2P0CX69 440 aa3.24□□□□□ -1.89
SLX4YLR135W IRC24P40580 263 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-JR2P47099 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-DR1Q03856 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-ML1Q04706 440 aaKnown RBP3.24□□□□□ -1.89
SLX4YLR135W TY1A-BRQ12217 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-NL2Q12470 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-GR2Q12485 440 aa3.24□□□□□ -1.89
SLX4YLR135W TY1A-BLQ12266 440 aa3.23□□□□□ -1.89
SLX4YLR135W SEC2P17065 759 aa3.23□□□□□ -1.89
SLX4YLR135W THI72Q08579 599 aa3.23□□□□□ -1.89
SLX4YLR135W YPR053CQ6Q5F3 151 aa3.22□□□□□ -1.89
SLX4YLR135W AI1P03875 834 aa3.21□□□□□ -1.89
SLX4YLR135W KIC1P38692 1080 aa3.21□□□□□ -1.9
SLX4YLR135W IFH1P39520 1085 aa3.21□□□□□ -1.9
SLX4YLR135W UBP2Q01476 1272 aa3.21□□□□□ -1.9
SLX4YLR135W PUS5Q06244 254 aa3.21□□□□□ -1.9
SLX4YLR135W YLR326WQ06170 240 aaKnown RBP3.2□□□□□ -1.9
SLX4YLR135W PCS60P38137 543 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SLX4YLR135W VHR2P40041 505 aa3.18□□□□□ -1.9
SLX4YLR135W RTT106P40161 455 aa3.18□□□□□ -1.9
SLX4YLR135W MAC1P35192 417 aa3.17□□□□□ -1.9
SLX4YLR135W LSC2P53312 427 aa3.16□□□□□ -1.9
SLX4YLR135W JJJ3P47138 172 aa3.15□□□□□ -1.9
SLX4YLR135W SYH1Q02875 849 aaKnown RBP3.15□□□□□ -1.9
SLX4YLR135W UBP14P38237 781 aaKnown RBP3.15□□□□□ -1.91
SLX4YLR135W MOD5P07884 428 aa3.13□□□□□ -1.91
SLX4YLR135W ROG3P43602 733 aa3.13□□□□□ -1.91
SLX4YLR135W RQC2Q12532 1038 aaKnown RBP3.12□□□□□ -1.91
SLX4YLR135W YPL034WQ03083 165 aa3.11□□□□□ -1.91
SLX4YLR135W TY1A-MR1Q04215 440 aa3.11□□□□□ -1.91
SLX4YLR135W YMR187CQ03236 431 aa3.1□□□□□ -1.91
SLX4YLR135W GAP1P19145 602 aaPredicted RBP3.09□□□□□ -1.91
SLX4YLR135W ARG82P07250 355 aa3.09□□□□□ -1.91
SLX4YLR135W SKN7P38889 622 aa3.09□□□□□ -1.91
SLX4YLR135W PAC1P39946 494 aaKnown RBP3.07□□□□□ -1.92
SLX4YLR135W YFL066CP43538 392 aa3.07□□□□□ -1.92
SLX4YLR135W KXD1P53158 218 aa3.07□□□□□ -1.92
SLX4YLR135W OSH7P38755 437 aa3.05□□□□□ -1.92
SLX4YLR135W KEX2P13134 814 aa3.03□□□□□ -1.92
SLX4YLR135W KIP2P28743 706 aa3.03□□□□□ -1.92
SLX4YLR135W TCB1Q12466 1186 aa3.03□□□□□ -1.92
SLX4YLR135W ADE12P80210 433 aaKnown RBP3.01□□□□□ -1.93
SLX4YLR135W CCP1P00431 361 aa3□□□□□ -1.93
SLX4YLR135W TDA6Q06466 467 aa3□□□□□ -1.93
SLX4YLR135W YJR098CP47139 656 aa3□□□□□ -1.93
SLX4YLR135W YPR109WQ06104 294 aa3□□□□□ -1.93
SLX4YLR135W AAD14P42884 376 aa2.99□□□□□ -1.93
SLX4YLR135W TPD3P31383 635 aa2.99□□□□□ -1.93
SLX4YLR135W TUB4P53378 473 aa2.99□□□□□ -1.93
SLX4YLR135W GIS1Q03833 894 aa2.98□□□□□ -1.93
SLX4YLR135W CEM1P39525 442 aa2.97□□□□□ -1.93
SLX4YLR135W IXR1P33417 597 aa2.97□□□□□ -1.93
SLX4YLR135W YNR014WP53719 212 aa2.97□□□□□ -1.93
SLX4YLR135W GLT1Q12680 2145 aaKnown RBP2.96□□□□□ -1.93
SLX4YLR135W MRT4P33201 236 aaKnown RBP2.96□□□□□ -1.94
SLX4YLR135W HXT10P43581 546 aa2.96□□□□□ -1.94
SLX4YLR135W ERF2Q06551 359 aa2.96□□□□□ -1.94
SLX4YLR135W MVP1P40959 511 aaKnown RBP2.95□□□□□ -1.94
SLX4YLR135W LSB6P42951 607 aa2.95□□□□□ -1.94
SLX4YLR135W DLD1P32891 587 aa2.95□□□□□ -1.94
SLX4YLR135W OMA1P36163 345 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms