RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C TY1A-LR1P0CX68 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-MR2P0CX69 440 aa9.15□□□□□ -0.94
TVP38YKR088C MVP1P40959 511 aaKnown RBP9.15□□□□□ -0.94
TVP38YKR088C TY1A-JR2P47099 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-DR1Q03856 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-ML1Q04706 440 aaKnown RBP9.15□□□□□ -0.94
TVP38YKR088C TY1A-BRQ12217 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-NL2Q12470 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-GR2Q12485 440 aa9.15□□□□□ -0.94
TVP38YKR088C LAM6Q08001 693 aa9.14□□□□□ -0.95
TVP38YKR088C SEC2P17065 759 aa9.13□□□□□ -0.95
TVP38YKR088C YPL062WQ02781 134 aa9.13□□□□□ -0.95
TVP38YKR088C PAT1P25644 796 aaKnown RBP9.12□□□□□ -0.95
TVP38YKR088C CLA4P48562 842 aa9.12□□□□□ -0.95
TVP38YKR088C FRK1Q03002 865 aaPredicted RBP9.11□□□□□ -0.95
TVP38YKR088C YPR109WQ06104 294 aa9.11□□□□□ -0.95
TVP38YKR088C RRN7P40992 514 aa9.1□□□□□ -0.95
TVP38YKR088C RGR1P19263 1082 aa9.08□□□□□ -0.96
TVP38YKR088C GBP2P25555 427 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
TVP38YKR088C GAR1P28007 205 aaKnown RBP9.08□□□□□ -0.96
TVP38YKR088C CDC4P07834 779 aa9.07□□□□□ -0.96
TVP38YKR088C BDP1P46678 594 aa9.05□□□□□ -0.96
TVP38YKR088C HED1Q03937 162 aa9□□□□□ -0.97
TVP38YKR088C KEX2P13134 814 aa8.98□□□□□ -0.97
TVP38YKR088C ERF2Q06551 359 aa8.94□□□□□ -0.98
TVP38YKR088C MET22P32179 357 aa8.93□□□□□ -0.98
TVP38YKR088C PSE1P32337 1089 aaKnown RBP8.91□□□□□ -0.98
TVP38YKR088C CKB1P43639 278 aa8.91□□□□□ -0.98
TVP38YKR088C PBS2P08018 668 aa8.9□□□□□ -0.98
TVP38YKR088C ENV9Q08651 330 aa8.9□□□□□ -0.98
TVP38YKR088C CLB5P30283 435 aa8.89□□□□□ -0.99
TVP38YKR088C PAC1P39946 494 aaKnown RBP8.88□□□□□ -0.99
TVP38YKR088C ASH1P34233 588 aa8.86□□□□□ -0.99
TVP38YKR088C MOD5P07884 428 aa8.85□□□□□ -0.99
TVP38YKR088C HST3P53687 447 aa8.85□□□□□ -0.99
TVP38YKR088C YDR444WQ04093 687 aa8.85□□□□□ -0.99
TVP38YKR088C TUB4P53378 473 aa8.84□□□□□ -0.99
TVP38YKR088C MET32Q12041 191 aa8.84□□□□□ -0.99
TVP38YKR088C AFT1P22149 690 aa8.82□□□□□ -1
TVP38YKR088C RTF1P53064 558 aa8.82□□□□□ -1
TVP38YKR088C AGE1Q04412 482 aa8.82□□□□□ -1
TVP38YKR088C PUS5Q06244 254 aa8.81□□□□□ -1
TVP38YKR088C MAM3Q12296 706 aa8.81□□□□□ -1
TVP38YKR088C YNL115CP53925 644 aa8.79□□□□□ -1
TVP38YKR088C LCB5Q06147 687 aaKnown RBP8.77□□□□□ -1.01
TVP38YKR088C KXD1P53158 218 aa8.74□□□□□ -1.01
TVP38YKR088C SIT4P20604 311 aa8.72□□□□□ -1.01
TVP38YKR088C TEA1P47988 759 aa8.72□□□□□ -1.01
TVP38YKR088C IES2P40154 320 aa8.71□□□□□ -1.02
TVP38YKR088C YJR115WP47152 169 aa8.71□□□□□ -1.02
TVP38YKR088C RRD1P40454 393 aaKnown RBP8.7□□□□□ -1.02
TVP38YKR088C DSF2P38213 736 aa8.69□□□□□ -1.02
TVP38YKR088C TPD3P31383 635 aa8.67□□□□□ -1.02
TVP38YKR088C SYH1Q02875 849 aaKnown RBP8.67□□□□□ -1.02
TVP38YKR088C YDL176WQ12027 708 aa8.67□□□□□ -1.02
TVP38YKR088C HXT10P43581 546 aa8.66□□□□□ -1.02
TVP38YKR088C NIS1P53939 407 aa8.66□□□□□ -1.02
TVP38YKR088C MSB3P48566 633 aaPredicted RBP8.65□□□□□ -1.02
TVP38YKR088C NUP42P49686 430 aaKnown RBP8.63□□□□□ -1.03
TVP38YKR088C PDC1P06169 563 aaKnown RBP8.61□□□□□ -1.03
TVP38YKR088C SLY41P22215 453 aa8.61□□□□□ -1.03
TVP38YKR088C UGA3P26370 528 aa8.6□□□□□ -1.03
TVP38YKR088C YMR196WQ04336 1088 aa8.6□□□□□ -1.03
TVP38YKR088C FPK1P53739 893 aa8.57□□□□□ -1.04
TVP38YKR088C TBF1Q02457 562 aa8.57□□□□□ -1.04
TVP38YKR088C SAS10Q12136 610 aaPredicted RBP8.57□□□□□ -1.04
TVP38YKR088C SRF1Q12516 437 aa8.57□□□□□ -1.04
TVP38YKR088C SPB4P25808 606 aaPredicted RBP8.56□□□□□ -1.04
TVP38YKR088C KIP2P28743 706 aa8.56□□□□□ -1.04
TVP38YKR088C YLR346CQ06139 101 aa8.56□□□□□ -1.04
TVP38YKR088C ALR1Q08269 859 aa8.56□□□□□ -1.04
TVP38YKR088C DIT2P21595 489 aa8.54□□□□□ -1.04
TVP38YKR088C PTK2P47116 818 aaKnown RBP8.54□□□□□ -1.04
TVP38YKR088C RPA14P50106 137 aa8.54□□□□□ -1.04
TVP38YKR088C PUS6P53294 404 aa8.54□□□□□ -1.04
TVP38YKR088C CAF120P53836 1060 aa8.53□□□□□ -1.04
TVP38YKR088C IXR1P33417 597 aa8.52□□□□□ -1.05
TVP38YKR088C YPR097WQ06839 1073 aa8.52□□□□□ -1.05
TVP38YKR088C YDL206WQ12424 762 aa8.52□□□□□ -1.05
TVP38YKR088C ACO2P39533 789 aa8.51□□□□□ -1.05
TVP38YKR088C OPT2Q06593 877 aa8.51□□□□□ -1.05
TVP38YKR088C MRT4P33201 236 aaKnown RBP8.47□□□□□ -1.05
TVP38YKR088C RTT106P40161 455 aa8.47□□□□□ -1.05
TVP38YKR088C TYW1Q08960 810 aaKnown RBP8.47□□□□□ -1.05
TVP38YKR088C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
TVP38YKR088C NUP85P46673 744 aa8.46□□□□□ -1.06
TVP38YKR088C TRM1P15565 570 aaKnown RBP8.45□□□□□ -1.06
TVP38YKR088C HST2P53686 357 aa8.45□□□□□ -1.06
TVP38YKR088C SCJ1P25303 377 aa8.44□□□□□ -1.06
TVP38YKR088C GLY1P37303 387 aaKnown RBP8.43□□□□□ -1.06
TVP38YKR088C DMA1P38823 416 aa8.42□□□□□ -1.06
TVP38YKR088C MMP1Q12372 583 aa8.42□□□□□ -1.06
TVP38YKR088C SCW11P53189 542 aa8.41□□□□□ -1.06
TVP38YKR088C MIP1P15801 1254 aa8.4□□□□□ -1.06
TVP38YKR088C YGR035CP53222 116 aa8.4□□□□□ -1.06
TVP38YKR088C TRK2P28584 889 aa8.39□□□□□ -1.07
TVP38YKR088C GLN1P32288 370 aaKnown RBP8.38□□□□□ -1.07
TVP38YKR088C MTC5Q03897 1148 aa8.38□□□□□ -1.07
TVP38YKR088C ATF2P53296 535 aa8.37□□□□□ -1.07
TVP38YKR088C YIR007WP40566 764 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms