RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeastyeast

Gene PAM17, Length 594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAM17YKR065C LEU3P08638 886 aa12.69□□□□□ -0.38
PAM17YKR065C TY1A-DR4O74302 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-HP0C2I4 478 aaKnown RBP12.68□□□□□ -0.38
PAM17YKR065C TY1A-AP0CX57 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-PR1P0CX58 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-ORP0CX59 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-PR2P0CX60 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-DR5P0CX65 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-ER2P0CX66 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-GR3P0CX67 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-LR1P0CX68 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-MR2P0CX69 440 aa12.68□□□□□ -0.38
PAM17YKR065C MRF1P30775 413 aaPredicted RBP12.68□□□□□ -0.38
PAM17YKR065C TY1A-JR2P47099 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-DR1Q03856 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-ML1Q04706 440 aaKnown RBP12.68□□□□□ -0.38
PAM17YKR065C TY1A-BRQ12217 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-NL2Q12470 440 aa12.68□□□□□ -0.38
PAM17YKR065C TY1A-GR2Q12485 440 aa12.68□□□□□ -0.38
PAM17YKR065C SEC2P17065 759 aa12.66□□□□□ -0.38
PAM17YKR065C ATF2P53296 535 aa12.65□□□□□ -0.38
PAM17YKR065C RTF1P53064 558 aa12.64□□□□□ -0.39
PAM17YKR065C KEX2P13134 814 aa12.63□□□□□ -0.39
PAM17YKR065C SIT4P20604 311 aa12.63□□□□□ -0.39
PAM17YKR065C SDH2P21801 266 aa12.62□□□□□ -0.39
PAM17YKR065C DNA2P38859 1522 aa12.62□□□□□ -0.39
PAM17YKR065C GLC3P32775 704 aa12.61□□□□□ -0.39
PAM17YKR065C NIS1P53939 407 aa12.61□□□□□ -0.39
PAM17YKR065C SPT6P23615 1451 aaKnown RBP12.6□□□□□ -0.39
PAM17YKR065C AIM7Q12156 149 aa12.6□□□□□ -0.39
PAM17YKR065C YEL077CQ3E7X8 1277 aa12.6□□□□□ -0.39
PAM17YKR065C AMS1P22855 1083 aa12.59□□□□□ -0.39
PAM17YKR065C SPT16P32558 1035 aaKnown RBP12.59□□□□□ -0.39
PAM17YKR065C KOG1P38873 1557 aa12.59□□□□□ -0.39
PAM17YKR065C HSL1P34244 1518 aa12.58□□□□□ -0.4
PAM17YKR065C PAT1P25644 796 aaKnown RBP12.58□□□□□ -0.4
PAM17YKR065C ERF2Q06551 359 aa12.58□□□□□ -0.4
PAM17YKR065C YNL115CP53925 644 aa12.57□□□□□ -0.4
PAM17YKR065C SPA2P23201 1466 aaKnown RBP12.57□□□□□ -0.4
PAM17YKR065C ERG12P07277 443 aa12.55□□□□□ -0.4
PAM17YKR065C RRN7P40992 514 aa12.54□□□□□ -0.4
PAM17YKR065C YMR196WQ04336 1088 aa12.54□□□□□ -0.4
PAM17YKR065C RAS1P01119 309 aa12.53□□□□□ -0.4
PAM17YKR065C FPK1P53739 893 aa12.53□□□□□ -0.4
PAM17YKR065C HST2P53686 357 aa12.47□□□□□ -0.41
PAM17YKR065C AGE1Q04412 482 aa12.47□□□□□ -0.41
PAM17YKR065C TUB4P53378 473 aa12.46□□□□□ -0.41
PAM17YKR065C RPN1P38764 993 aaKnown RBP12.44□□□□□ -0.42
PAM17YKR065C SSN2P38931 1420 aa12.43□□□□□ -0.42
PAM17YKR065C SLY41P22215 453 aa12.42□□□□□ -0.42
PAM17YKR065C PAC1P39946 494 aaKnown RBP12.42□□□□□ -0.42
PAM17YKR065C GLN1P32288 370 aaKnown RBP12.4□□□□□ -0.42
PAM17YKR065C CST6P40535 587 aa12.39□□□□□ -0.43
PAM17YKR065C MMP1Q12372 583 aa12.39□□□□□ -0.43
PAM17YKR065C SRC1Q03707 834 aa12.38□□□□□ -0.43
PAM17YKR065C LAM6Q08001 693 aa12.38□□□□□ -0.43
PAM17YKR065C KIN1P13185 1064 aa12.34□□□□□ -0.43
PAM17YKR065C SCJ1P25303 377 aa12.34□□□□□ -0.43
PAM17YKR065C HIR3P47171 1648 aa12.33□□□□□ -0.43
PAM17YKR065C MOD5P07884 428 aa12.33□□□□□ -0.44
PAM17YKR065C BDP1P46678 594 aa12.33□□□□□ -0.44
PAM17YKR065C PUS6P53294 404 aa12.32□□□□□ -0.44
PAM17YKR065C FRK1Q03002 865 aaPredicted RBP12.32□□□□□ -0.44
PAM17YKR065C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.31□□□□□ -0.44not detected
PAM17YKR065C KXD1P53158 218 aa12.31□□□□□ -0.44
PAM17YKR065C TBF1Q02457 562 aa12.3□□□□□ -0.44
PAM17YKR065C CSN12P47130 423 aa12.29□□□□□ -0.44
PAM17YKR065C ESS1P22696 170 aa12.28□□□□□ -0.44
PAM17YKR065C TRK1P12685 1235 aa12.27□□□□□ -0.45
PAM17YKR065C TYW1Q08960 810 aaKnown RBP12.27□□□□□ -0.45
PAM17YKR065C TRM1P15565 570 aaKnown RBP12.26□□□□□ -0.45
PAM17YKR065C TPD3P31383 635 aa12.26□□□□□ -0.45
PAM17YKR065C KTR1P27810 393 aaKnown RBP12.25□□□□□ -0.45
PAM17YKR065C RPA14P50106 137 aa12.24□□□□□ -0.45
PAM17YKR065C HXT10P43581 546 aa12.23□□□□□ -0.45
PAM17YKR065C ALR1Q08269 859 aa12.23□□□□□ -0.45
PAM17YKR065C XRN1P22147 1528 aaKnown RBP12.22□□□□□ -0.45
PAM17YKR065C PDC1P06169 563 aaKnown RBP12.22□□□□□ -0.45
PAM17YKR065C YDL206WQ12424 762 aa12.22□□□□□ -0.45
PAM17YKR065C SSA2P10592 639 aaKnown RBP12.21□□□□□ -0.45
PAM17YKR065C HED1Q03937 162 aa12.21□□□□□ -0.45
PAM17YKR065C YJU3P28321 313 aa12.2□□□□□ -0.46
PAM17YKR065C RRD1P40454 393 aaKnown RBP12.2□□□□□ -0.46
PAM17YKR065C YPR097WQ06839 1073 aa12.2□□□□□ -0.46
PAM17YKR065C PKH3Q03306 898 aaPredicted RBP12.19□□□□□ -0.46
PAM17YKR065C CLA4P48562 842 aa12.18□□□□□ -0.46
PAM17YKR065C RSC30P38781 883 aa12.16□□□□□ -0.46
PAM17YKR065C AIR1P40507 360 aaKnown RBP12.16□□□□□ -0.46
PAM17YKR065C BUD4P47136 1447 aa12.15□□□□□ -0.46
PAM17YKR065C ECM5Q03214 1411 aa12.15□□□□□ -0.46
PAM17YKR065C CDC4P07834 779 aa12.15□□□□□ -0.46
PAM17YKR065C THO2P53552 1597 aaKnown RBP12.14□□□□□ -0.47
PAM17YKR065C PUS5Q06244 254 aa12.13□□□□□ -0.47
PAM17YKR065C ARG8P18544 423 aa12.12□□□□□ -0.47
PAM17YKR065C RAD59Q12223 238 aa12.09□□□□□ -0.47
PAM17YKR065C GUA1P38625 525 aaKnown RBP12.08□□□□□ -0.48
PAM17YKR065C SYH1Q02875 849 aaKnown RBP12.08□□□□□ -0.48
PAM17YKR065C HPC2Q01448 625 aa12.04□□□□□ -0.48
PAM17YKR065C MET32Q12041 191 aa12.01□□□□□ -0.49
PAM17YKR065C REV3P14284 1504 aa12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms