RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeastyeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOS1YKL205W RIM15P43565 1770 aa5.52□□□□□ -1.53
LOS1YKL205W SEC3P33332 1336 aaKnown RBP5.51□□□□□ -1.53
LOS1YKL205W RAD9P14737 1309 aa5.5□□□□□ -1.53
LOS1YKL205W NOP7P53261 605 aaKnown RBP5.48□□□□□ -1.53
LOS1YKL205W YRF1-4O13559 1382 aa5.48□□□□□ -1.53
LOS1YKL205W PTP3P40048 928 aa5.47□□□□□ -1.53
LOS1YKL205W YNR029CP53729 429 aaKnown RBP5.47□□□□□ -1.53
LOS1YKL205W FKH1P40466 484 aa5.45□□□□□ -1.54
LOS1YKL205W ABP1P15891 592 aaKnown RBP5.44□□□□□ -1.54
LOS1YKL205W CPS1P27614 576 aa5.43□□□□□ -1.54
LOS1YKL205W TAP42Q04372 366 aa5.42□□□□□ -1.54
LOS1YKL205W SIR4P11978 1358 aa5.42□□□□□ -1.54
LOS1YKL205W KRE5P22023 1365 aa5.42□□□□□ -1.54
LOS1YKL205W NAP1P25293 417 aaKnown RBP5.41□□□□□ -1.54
LOS1YKL205W YAH1Q12184 172 aaKnown RBP5.41□□□□□ -1.54
LOS1YKL205W SPT7P35177 1332 aa5.4□□□□□ -1.55
LOS1YKL205W AUS1Q08409 1394 aa5.4□□□□□ -1.55
LOS1YKL205W LYS2P07702 1392 aa5.39□□□□□ -1.55
LOS1YKL205W YFR016CP43597 1233 aaKnown RBP5.38□□□□□ -1.55
LOS1YKL205W POL5P39985 1022 aaKnown RBP5.38□□□□□ -1.55
LOS1YKL205W RPP0P05317 312 aaKnown RBP5.37□□□□□ -1.55
LOS1YKL205W SPE2P21182 396 aa5.36□□□□□ -1.55
LOS1YKL205W MTR4P47047 1073 aaKnown RBP5.36□□□□□ -1.55
LOS1YKL205W RPO41P13433 1351 aaKnown RBP5.36□□□□□ -1.55
LOS1YKL205W RSF2P46974 1380 aa5.35□□□□□ -1.55
LOS1YKL205W ROM2P51862 1356 aaKnown RBP5.34□□□□□ -1.56
LOS1YKL205W THI12P42883 340 aa5.33□□□□□ -1.56
LOS1YKL205W THI5P43534 340 aa5.33□□□□□ -1.56
LOS1YKL205W THI11P47183 340 aa5.33□□□□□ -1.56
LOS1YKL205W THI13Q07748 340 aa5.33□□□□□ -1.56
LOS1YKL205W GRX4P32642 244 aa5.33□□□□□ -1.56
LOS1YKL205W MRX12P47084 519 aa5.33□□□□□ -1.56
LOS1YKL205W TAF8Q03750 510 aa5.32□□□□□ -1.56
LOS1YKL205W CAB1Q04430 367 aa5.32□□□□□ -1.56
LOS1YKL205W FIG2P25653 1609 aa5.32□□□□□ -1.56
LOS1YKL205W PPH3P32345 308 aa5.31□□□□□ -1.56
LOS1YKL205W CTF4Q01454 927 aa5.31□□□□□ -1.56
LOS1YKL205W TAF5P38129 798 aa5.31□□□□□ -1.56
LOS1YKL205W RIA1P53893 1110 aa5.3□□□□□ -1.56
LOS1YKL205W LEU2P04173 364 aaPredicted RBP5.28□□□□□ -1.56
LOS1YKL205W KIP3P53086 805 aaKnown RBP5.28□□□□□ -1.56
LOS1YKL205W YFR006WP43590 535 aa5.28□□□□□ -1.56
LOS1YKL205W YEF3P16521 1044 aaKnown RBP5.27□□□□□ -1.57
LOS1YKL205W ENP1P38333 483 aaKnown RBP5.27□□□□□ -1.57
LOS1YKL205W YRB30P53107 440 aaPredicted RBP5.27□□□□□ -1.57
LOS1YKL205W PDS5Q04264 1277 aa5.25□□□□□ -1.57
LOS1YKL205W HKR1P41809 1802 aa5.24□□□□□ -1.57
LOS1YKL205W PDI1P17967 522 aaKnown RBP5.23□□□□□ -1.57
LOS1YKL205W SLM3Q12093 417 aa5.23□□□□□ -1.57
LOS1YKL205W DUR1,2P32528 1835 aaKnown RBP5.23□□□□□ -1.57
LOS1YKL205W RCM1P53972 490 aa5.22□□□□□ -1.57
LOS1YKL205W YJR008WP47085 338 aa5.22□□□□□ -1.57
LOS1YKL205W CHZ1P40019 153 aaPredicted RBP5.21□□□□□ -1.58
LOS1YKL205W RTF1P53064 558 aa5.2□□□□□ -1.58
LOS1YKL205W GTT3P39996 337 aa5.19□□□□□ -1.58
LOS1YKL205W RTG3P38165 486 aa5.18□□□□□ -1.58
LOS1YKL205W RRP46P53256 223 aaPredicted RBP5.17□□□□□ -1.58
LOS1YKL205W PRP5P21372 849 aaPredicted RBP5.17□□□□□ -1.58
LOS1YKL205W YNL050CP53952 270 aa5.17□□□□□ -1.58
LOS1YKL205W SSK22P25390 1331 aaPredicted RBP5.16□□□□□ -1.58
LOS1YKL205W REB1P21538 810 aa5.16□□□□□ -1.58
LOS1YKL205W HEF3P53978 1044 aaKnown RBP5.15□□□□□ -1.58
LOS1YKL205W PRS1P32895 427 aaKnown RBP5.15□□□□□ -1.59
LOS1YKL205W NUP145P49687 1317 aa5.15□□□□□ -1.59
LOS1YKL205W MAM1P40065 302 aa5.15□□□□□ -1.59
LOS1YKL205W HGH1P48362 394 aaKnown RBP5.14□□□□□ -1.59
LOS1YKL205W TCB1Q12466 1186 aa5.14□□□□□ -1.59
LOS1YKL205W YMR074CQ04773 145 aa5.13□□□□□ -1.59
LOS1YKL205W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
LOS1YKL205W CDC45Q08032 650 aa5.13□□□□□ -1.59
LOS1YKL205W TRK1P12685 1235 aa5.12□□□□□ -1.59
LOS1YKL205W VPS27P40343 622 aaKnown RBP5.12□□□□□ -1.59
LOS1YKL205W DSD1P53095 428 aa5.12□□□□□ -1.59
LOS1YKL205W ENV9Q08651 330 aa5.12□□□□□ -1.59
LOS1YKL205W INP54Q08227 384 aaKnown RBP5.12□□□□□ -1.59
LOS1YKL205W UGA3P26370 528 aa5.11□□□□□ -1.59
LOS1YKL205W NTH2P35172 780 aa5.11□□□□□ -1.59
LOS1YKL205W TFA1P36100 482 aa5.11□□□□□ -1.59
LOS1YKL205W SET1P38827 1080 aaKnown RBP5.11□□□□□ -1.59
LOS1YKL205W MEC3Q02574 474 aa5.11□□□□□ -1.59
LOS1YKL205W PRD1P25375 712 aa5.11□□□□□ -1.59
LOS1YKL205W IMH1Q06704 911 aaKnown RBP5.11□□□□□ -1.59
LOS1YKL205W IES2P40154 320 aa5.1□□□□□ -1.59
LOS1YKL205W YIL055CP40523 627 aaKnown RBP5.1□□□□□ -1.59
LOS1YKL205W MSB3P48566 633 aaPredicted RBP5.1□□□□□ -1.59
LOS1YKL205W NST1P53935 1240 aa5.1□□□□□ -1.59
LOS1YKL205W YKR075CP36155 307 aa5.1□□□□□ -1.59
LOS1YKL205W MDG1P53885 366 aa5.1□□□□□ -1.59
LOS1YKL205W ENT1Q12518 454 aa5.1□□□□□ -1.59
LOS1YKL205W RPS24AP0CX31 135 aaKnown RBP5.1□□□□□ -1.59
LOS1YKL205W RPS24BP0CX32 135 aaKnown RBP5.1□□□□□ -1.59
LOS1YKL205W HIM1Q06674 414 aa5.1□□□□□ -1.59
LOS1YKL205W PSD2P53037 1138 aaKnown RBP5.09□□□□□ -1.59
LOS1YKL205W CSE4P36012 229 aa5.09□□□□□ -1.59
LOS1YKL205W YDR306CQ06640 478 aa5.08□□□□□ -1.6
LOS1YKL205W SAC3P46674 1301 aa5.08□□□□□ -1.6
LOS1YKL205W AKL1P38080 1108 aaKnown RBP5.08□□□□□ -1.6
LOS1YKL205W RAD4P14736 754 aa5.07□□□□□ -1.6
LOS1YKL205W RCR1P38212 213 aa5.07□□□□□ -1.6
LOS1YKL205W BUD27P43573 796 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
Retrieved 100 of 5,963 RNA–protein pairs in 163.4 ms