RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W TGL3P40308 642 aa7.27□□□□□ -1.25
ASH1YKL185W VMR1P38735 1592 aa7.27□□□□□ -1.25
ASH1YKL185W PAF1P38351 445 aa7.25□□□□□ -1.25
ASH1YKL185W YPR148CQ06523 435 aa7.25□□□□□ -1.25
ASH1YKL185W CAB3P36076 571 aa7.24□□□□□ -1.25
ASH1YKL185W NUP188P52593 1655 aaKnown RBP7.24□□□□□ -1.25
ASH1YKL185W MHP1P43638 1398 aa7.23□□□□□ -1.25
ASH1YKL185W YLR419WQ06698 1435 aaKnown RBP7.23□□□□□ -1.25
ASH1YKL185W TY3B-IQ7LHG5 1498 aaKnown RBP7.23□□□□□ -1.25
ASH1YKL185W CFT1Q06632 1357 aaKnown RBP7.21□□□□□ -1.25
ASH1YKL185W PDR11P40550 1411 aa7.21□□□□□ -1.26
ASH1YKL185W RAV1P47104 1357 aa7.21□□□□□ -1.26
ASH1YKL185W EBP2P36049 427 aaKnown RBP7.2□□□□□ -1.26
ASH1YKL185W IML1P47170 1584 aa7.2□□□□□ -1.26
ASH1YKL185W TRM3Q07527 1436 aa7.2□□□□□ -1.26
ASH1YKL185W ORC1P54784 914 aaPredicted RBP7.19□□□□□ -1.26
ASH1YKL185W NUP192P47054 1683 aa7.19□□□□□ -1.26
ASH1YKL185W RTC1Q08281 1341 aa7.17□□□□□ -1.26
ASH1YKL185W RCR1P38212 213 aa7.16□□□□□ -1.26
ASH1YKL185W DNF2Q12675 1612 aa7.16□□□□□ -1.26
ASH1YKL185W RTG3P38165 486 aa7.15□□□□□ -1.27
ASH1YKL185W DRS2P39524 1355 aa7.14□□□□□ -1.27
ASH1YKL185W FUN12P39730 1002 aaKnown RBP7.13□□□□□ -1.27
ASH1YKL185W TAF5P38129 798 aa7.13□□□□□ -1.27
ASH1YKL185W MLP1Q02455 1875 aaKnown RBP7.11□□□□□ -1.27
ASH1YKL185W VPS29P38759 282 aa7.1□□□□□ -1.27
ASH1YKL185W IME2P32581 645 aa7.09□□□□□ -1.27
ASH1YKL185W YAP5P40574 245 aa7.09□□□□□ -1.27
ASH1YKL185W YFR016CP43597 1233 aaKnown RBP7.09□□□□□ -1.27
ASH1YKL185W KIP3P53086 805 aaKnown RBP7.09□□□□□ -1.27
ASH1YKL185W PDS5Q04264 1277 aa7.09□□□□□ -1.27
ASH1YKL185W BNI1P41832 1953 aa7.09□□□□□ -1.28
ASH1YKL185W RPC31P17890 251 aa7.08□□□□□ -1.28
ASH1YKL185W ESL2P36168 1195 aa7.08□□□□□ -1.28
ASH1YKL185W CLC1P17891 233 aa7.06□□□□□ -1.28
ASH1YKL185W RAM2P29703 316 aa7.06□□□□□ -1.28
ASH1YKL185W DMA1P38823 416 aa7.05□□□□□ -1.28
ASH1YKL185W NST1P53935 1240 aa7.05□□□□□ -1.28
ASH1YKL185W PIB1Q06651 286 aa7.05□□□□□ -1.28
ASH1YKL185W YOR238WQ08634 303 aa7.05□□□□□ -1.28
ASH1YKL185W YMR1P47147 688 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
ASH1YKL185W OPY1P38271 328 aa7.04□□□□□ -1.28
ASH1YKL185W YFR006WP43590 535 aa7.03□□□□□ -1.28
ASH1YKL185W SPE2P21182 396 aa7.03□□□□□ -1.28
ASH1YKL185W DBP1P24784 617 aaKnown RBP7.03□□□□□ -1.28
ASH1YKL185W TYS1P36421 394 aaKnown RBP7.03□□□□□ -1.28
ASH1YKL185W EAF7P53911 425 aaKnown RBP7.03□□□□□ -1.28
ASH1YKL185W BCK1Q01389 1478 aa7.02□□□□□ -1.29
ASH1YKL185W MST1P07236 462 aa7.02□□□□□ -1.29
ASH1YKL185W STS1P38637 319 aa7.02□□□□□ -1.29
ASH1YKL185W IPL1P38991 367 aa7□□□□□ -1.29
ASH1YKL185W ITT1Q04638 464 aa7□□□□□ -1.29
ASH1YKL185W SCT1P32784 759 aa6.99□□□□□ -1.29
ASH1YKL185W YAP3P38749 330 aa6.99□□□□□ -1.29
ASH1YKL185W RAD9P14737 1309 aa6.99□□□□□ -1.29
ASH1YKL185W SNF2P22082 1703 aa6.98□□□□□ -1.29
ASH1YKL185W FPR3P38911 411 aaKnown RBP6.97□□□□□ -1.29
ASH1YKL185W TAF8Q03750 510 aa6.97□□□□□ -1.29
ASH1YKL185W URN1Q06525 465 aaKnown RBP6.97□□□□□ -1.29
ASH1YKL185W ALD4P46367 519 aaKnown RBP6.96□□□□□ -1.3
ASH1YKL185W CDC45Q08032 650 aa6.96□□□□□ -1.3
ASH1YKL185W RVB2Q12464 471 aaKnown RBP6.96□□□□□ -1.3
ASH1YKL185W HAP1P0CE41 1502 aa6.95□□□□□ -1.3
ASH1YKL185W MAK11P20484 414 aaKnown RBP6.95□□□□□ -1.3
ASH1YKL185W VPS27P40343 622 aaKnown RBP6.95□□□□□ -1.3
ASH1YKL185W DNF3Q12674 1656 aa6.94□□□□□ -1.3
ASH1YKL185W CHZ1P40019 153 aaPredicted RBP6.93□□□□□ -1.3
ASH1YKL185W FKH1P40466 484 aa6.93□□□□□ -1.3
ASH1YKL185W CAB1Q04430 367 aa6.93□□□□□ -1.3
ASH1YKL185W MNN4P36044 1178 aa6.92□□□□□ -1.3
ASH1YKL185W SNF7P39929 240 aaKnown RBP6.92□□□□□ -1.3
ASH1YKL185W GTT3P39996 337 aa6.92□□□□□ -1.3
ASH1YKL185W RPP0P05317 312 aaKnown RBP6.92□□□□□ -1.3
ASH1YKL185W YML133CQ03099 1374 aa6.91□□□□□ -1.3
ASH1YKL185W YLL067CQ07888 1374 aa6.91□□□□□ -1.3
ASH1YKL185W YLL066CQ99208 1374 aa6.91□□□□□ -1.3
ASH1YKL185W TRK1P12685 1235 aa6.9□□□□□ -1.3
ASH1YKL185W YEF3P16521 1044 aaKnown RBP6.9□□□□□ -1.3
ASH1YKL185W TCB2P48231 1178 aa6.9□□□□□ -1.3
ASH1YKL185W VMA1P17255 1071 aaKnown RBP6.9□□□□□ -1.31
ASH1YKL185W NAP1P25293 417 aaKnown RBP6.9□□□□□ -1.31
ASH1YKL185W USO1P25386 1790 aa6.89□□□□□ -1.31
ASH1YKL185W MIF2P35201 549 aa6.89□□□□□ -1.31
ASH1YKL185W UBP9P39967 754 aa6.88□□□□□ -1.31
ASH1YKL185W YDL144CQ07589 356 aa6.88□□□□□ -1.31
ASH1YKL185W WSC3Q12215 556 aa6.88□□□□□ -1.31
ASH1YKL185W TY1B-NL2Q99337 1749 aaKnown RBP6.88□□□□□ -1.31
ASH1YKL185W KRE5P22023 1365 aa6.88□□□□□ -1.31
ASH1YKL185W COQ8P27697 501 aa6.87□□□□□ -1.31
ASH1YKL185W YIR014WP40570 242 aa6.87□□□□□ -1.31
ASH1YKL185W YBL029C-AQ3E756 94 aa6.87□□□□□ -1.31
ASH1YKL185W ROX1P25042 368 aa6.87□□□□□ -1.31
ASH1YKL185W BUD31P25337 157 aaPredicted RBP6.87□□□□□ -1.31
ASH1YKL185W IOC4Q04213 475 aa6.87□□□□□ -1.31
ASH1YKL185W ABP1P15891 592 aaKnown RBP6.86□□□□□ -1.31
ASH1YKL185W SUI2P20459 304 aaKnown RBP6.86□□□□□ -1.31
ASH1YKL185W LEO1P38439 464 aa6.86□□□□□ -1.31
ASH1YKL185W DJP1P40564 432 aa6.86□□□□□ -1.31
ASH1YKL185W SET1P38827 1080 aaKnown RBP6.85□□□□□ -1.31
ASH1YKL185W EDS1P38073 919 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms