RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C TY1A-JR2P47099 440 aa5.29□□□□□ -1.56
HCS1YKL017C GCR2Q01722 534 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-DR1Q03856 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-ML1Q04706 440 aaKnown RBP5.29□□□□□ -1.56
HCS1YKL017C TY1A-BRQ12217 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-NL2Q12470 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-GR2Q12485 440 aa5.29□□□□□ -1.56
HCS1YKL017C CLA4P48562 842 aa5.28□□□□□ -1.56
HCS1YKL017C LAM6Q08001 693 aa5.28□□□□□ -1.56
HCS1YKL017C COX6P00427 148 aa5.27□□□□□ -1.57
HCS1YKL017C MVP1P40959 511 aaKnown RBP5.27□□□□□ -1.57
HCS1YKL017C MAK21Q12176 1025 aaKnown RBP5.27□□□□□ -1.57
HCS1YKL017C YPR109WQ06104 294 aa5.25□□□□□ -1.57
HCS1YKL017C RGR1P19263 1082 aa5.24□□□□□ -1.57
HCS1YKL017C GAR1P28007 205 aaKnown RBP5.24□□□□□ -1.57
HCS1YKL017C VPS70P47161 811 aa5.24□□□□□ -1.57
HCS1YKL017C FRK1Q03002 865 aaPredicted RBP5.24□□□□□ -1.57
HCS1YKL017C CDC4P07834 779 aa5.24□□□□□ -1.57
HCS1YKL017C RRN7P40992 514 aa5.23□□□□□ -1.57
HCS1YKL017C PAT1P25644 796 aaKnown RBP5.22□□□□□ -1.57
HCS1YKL017C BDP1P46678 594 aa5.22□□□□□ -1.57
HCS1YKL017C GBP2P25555 427 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
HCS1YKL017C HED1Q03937 162 aa5.2□□□□□ -1.58
HCS1YKL017C MET22P32179 357 aa5.18□□□□□ -1.58
HCS1YKL017C KEX2P13134 814 aa5.17□□□□□ -1.58
HCS1YKL017C ERF2Q06551 359 aa5.17□□□□□ -1.58
HCS1YKL017C ENV9Q08651 330 aa5.16□□□□□ -1.58
HCS1YKL017C MOD5P07884 428 aa5.13□□□□□ -1.59
HCS1YKL017C PAC1P39946 494 aaKnown RBP5.12□□□□□ -1.59
HCS1YKL017C PSE1P32337 1089 aaKnown RBP5.12□□□□□ -1.59
HCS1YKL017C ASH1P34233 588 aa5.12□□□□□ -1.59
HCS1YKL017C YDR444WQ04093 687 aa5.11□□□□□ -1.59
HCS1YKL017C MET32Q12041 191 aa5.11□□□□□ -1.59
HCS1YKL017C AGE1Q04412 482 aa5.1□□□□□ -1.59
HCS1YKL017C PBS2P08018 668 aa5.09□□□□□ -1.59
HCS1YKL017C AFT1P22149 690 aa5.09□□□□□ -1.59
HCS1YKL017C TUB4P53378 473 aa5.09□□□□□ -1.59
HCS1YKL017C CLB5P30283 435 aa5.09□□□□□ -1.59
HCS1YKL017C CKB1P43639 278 aa5.09□□□□□ -1.59
HCS1YKL017C HST3P53687 447 aa5.08□□□□□ -1.6
HCS1YKL017C PUS5Q06244 254 aa5.08□□□□□ -1.6
HCS1YKL017C RTF1P53064 558 aa5.08□□□□□ -1.6
HCS1YKL017C LCB5Q06147 687 aaKnown RBP5.08□□□□□ -1.6
HCS1YKL017C YNL115CP53925 644 aa5.06□□□□□ -1.6
HCS1YKL017C YDL176WQ12027 708 aa5.04□□□□□ -1.6
HCS1YKL017C SIT4P20604 311 aa5.03□□□□□ -1.6
HCS1YKL017C RRD1P40454 393 aaKnown RBP5.03□□□□□ -1.6
HCS1YKL017C YJR115WP47152 169 aa5.03□□□□□ -1.6
HCS1YKL017C MAM3Q12296 706 aa5.03□□□□□ -1.6
HCS1YKL017C KXD1P53158 218 aa5.02□□□□□ -1.61
HCS1YKL017C TPD3P31383 635 aa5.01□□□□□ -1.61
HCS1YKL017C TEA1P47988 759 aa5□□□□□ -1.61
HCS1YKL017C HXT10P43581 546 aa4.99□□□□□ -1.61
HCS1YKL017C MSB3P48566 633 aaPredicted RBP4.98□□□□□ -1.61
HCS1YKL017C DSF2P38213 736 aa4.98□□□□□ -1.61
HCS1YKL017C IES2P40154 320 aa4.98□□□□□ -1.61
HCS1YKL017C NIS1P53939 407 aa4.98□□□□□ -1.61
HCS1YKL017C SYH1Q02875 849 aaKnown RBP4.98□□□□□ -1.61
HCS1YKL017C PDC1P06169 563 aaKnown RBP4.96□□□□□ -1.62
HCS1YKL017C NUP42P49686 430 aaKnown RBP4.96□□□□□ -1.62
HCS1YKL017C SLY41P22215 453 aa4.94□□□□□ -1.62
HCS1YKL017C UGA3P26370 528 aa4.94□□□□□ -1.62
HCS1YKL017C ACO2P39533 789 aa4.94□□□□□ -1.62
HCS1YKL017C PTK2P47116 818 aaKnown RBP4.92□□□□□ -1.62
HCS1YKL017C FPK1P53739 893 aa4.92□□□□□ -1.62
HCS1YKL017C CAF120P53836 1060 aa4.92□□□□□ -1.62
HCS1YKL017C YLR346CQ06139 101 aa4.92□□□□□ -1.62
HCS1YKL017C OPT2Q06593 877 aa4.92□□□□□ -1.62
HCS1YKL017C DIT2P21595 489 aa4.91□□□□□ -1.62
HCS1YKL017C RPA14P50106 137 aa4.91□□□□□ -1.62
HCS1YKL017C PUS6P53294 404 aa4.91□□□□□ -1.62
HCS1YKL017C YPR097WQ06839 1073 aa4.91□□□□□ -1.62
HCS1YKL017C ALR1Q08269 859 aa4.91□□□□□ -1.62
HCS1YKL017C SRF1Q12516 437 aa4.91□□□□□ -1.62
HCS1YKL017C KIP2P28743 706 aa4.9□□□□□ -1.62
HCS1YKL017C YMR196WQ04336 1088 aa4.9□□□□□ -1.62
HCS1YKL017C SAS10Q12136 610 aaPredicted RBP4.9□□□□□ -1.62
HCS1YKL017C MRT4P33201 236 aaKnown RBP4.89□□□□□ -1.63
HCS1YKL017C YDL206WQ12424 762 aa4.89□□□□□ -1.63
HCS1YKL017C IXR1P33417 597 aa4.88□□□□□ -1.63
HCS1YKL017C TBF1Q02457 562 aa4.88□□□□□ -1.63
HCS1YKL017C NUP85P46673 744 aa4.88□□□□□ -1.63
HCS1YKL017C SPB4P25808 606 aaPredicted RBP4.87□□□□□ -1.63
HCS1YKL017C GLY1P37303 387 aaKnown RBP4.87□□□□□ -1.63
HCS1YKL017C RTT106P40161 455 aa4.87□□□□□ -1.63
HCS1YKL017C MTC5Q03897 1148 aa4.87□□□□□ -1.63
HCS1YKL017C TRK2P28584 889 aa4.87□□□□□ -1.63
HCS1YKL017C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
HCS1YKL017C SCJ1P25303 377 aa4.85□□□□□ -1.63
HCS1YKL017C HST2P53686 357 aa4.85□□□□□ -1.63
HCS1YKL017C TYW1Q08960 810 aaKnown RBP4.85□□□□□ -1.63
HCS1YKL017C TRM1P15565 570 aaKnown RBP4.85□□□□□ -1.63
HCS1YKL017C SCW11P53189 542 aa4.84□□□□□ -1.63
HCS1YKL017C YGR035CP53222 116 aa4.84□□□□□ -1.63
HCS1YKL017C MIP1P15801 1254 aa4.84□□□□□ -1.64
HCS1YKL017C YIR007WP40566 764 aa4.84□□□□□ -1.64
HCS1YKL017C TY1A-BLQ12266 440 aa4.83□□□□□ -1.64
HCS1YKL017C MMP1Q12372 583 aa4.82□□□□□ -1.64
HCS1YKL017C HPF1Q05164 967 aa4.81□□□□□ -1.64
HCS1YKL017C ARG82P07250 355 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms