RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W KIN1P13185 1064 aa6.95□□□□□ -1.3
CAP1YKL007W SIT4P20604 311 aa6.95□□□□□ -1.3
CAP1YKL007W GCD11P32481 527 aaKnown RBP6.95□□□□□ -1.3
CAP1YKL007W NIS1P53939 407 aa6.95□□□□□ -1.3
CAP1YKL007W YNL115CP53925 644 aa6.94□□□□□ -1.3
CAP1YKL007W PAT1P25644 796 aaKnown RBP6.92□□□□□ -1.3
CAP1YKL007W MRF1P30775 413 aaPredicted RBP6.92□□□□□ -1.3
CAP1YKL007W FPK1P53739 893 aa6.92□□□□□ -1.3
CAP1YKL007W KEX2P13134 814 aa6.91□□□□□ -1.3
CAP1YKL007W HST2P53686 357 aa6.91□□□□□ -1.3
CAP1YKL007W GLN1P32288 370 aaKnown RBP6.89□□□□□ -1.31
CAP1YKL007W SPT16P32558 1035 aaKnown RBP6.88□□□□□ -1.31
CAP1YKL007W MMP1Q12372 583 aa6.88□□□□□ -1.31
CAP1YKL007W TY1A-DR4O74302 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-HP0C2I4 478 aaKnown RBP6.87□□□□□ -1.31
CAP1YKL007W TY1A-AP0CX57 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-PR1P0CX58 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-ORP0CX59 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-PR2P0CX60 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-DR5P0CX65 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-ER2P0CX66 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-GR3P0CX67 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-LR1P0CX68 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-MR2P0CX69 440 aa6.87□□□□□ -1.31
CAP1YKL007W SEC2P17065 759 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-JR2P47099 440 aa6.87□□□□□ -1.31
CAP1YKL007W CSN12P47130 423 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-DR1Q03856 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-ML1Q04706 440 aaKnown RBP6.87□□□□□ -1.31
CAP1YKL007W TY1A-BRQ12217 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-NL2Q12470 440 aa6.87□□□□□ -1.31
CAP1YKL007W TY1A-GR2Q12485 440 aa6.87□□□□□ -1.31
CAP1YKL007W SSA2P10592 639 aaKnown RBP6.86□□□□□ -1.31
CAP1YKL007W SLY41P22215 453 aa6.86□□□□□ -1.31
CAP1YKL007W ERF2Q06551 359 aa6.86□□□□□ -1.31
CAP1YKL007W ERG12P07277 443 aa6.84□□□□□ -1.31
CAP1YKL007W RRN7P40992 514 aa6.83□□□□□ -1.32
CAP1YKL007W YEL077CQ3E7X8 1277 aa6.83□□□□□ -1.32
CAP1YKL007W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
CAP1YKL007W SCJ1P25303 377 aa6.81□□□□□ -1.32
CAP1YKL007W PUS6P53294 404 aa6.81□□□□□ -1.32
CAP1YKL007W TUB4P53378 473 aa6.81□□□□□ -1.32
CAP1YKL007W DPS1P04802 557 aaKnown RBP6.8□□□□□ -1.32
CAP1YKL007W TYW1Q08960 810 aaKnown RBP6.8□□□□□ -1.32
CAP1YKL007W ESS1P22696 170 aa6.79□□□□□ -1.32
CAP1YKL007W GUA1P38625 525 aaKnown RBP6.79□□□□□ -1.32
CAP1YKL007W TBF1Q02457 562 aa6.79□□□□□ -1.32
CAP1YKL007W AGE1Q04412 482 aa6.79□□□□□ -1.32
CAP1YKL007W LAM6Q08001 693 aa6.79□□□□□ -1.32
CAP1YKL007W AMS1P22855 1083 aa6.78□□□□□ -1.32
CAP1YKL007W HGH1P48362 394 aaKnown RBP6.78□□□□□ -1.32
CAP1YKL007W HPC2Q01448 625 aa6.78□□□□□ -1.32
CAP1YKL007W KTR1P27810 393 aaKnown RBP6.77□□□□□ -1.33
CAP1YKL007W KXD1P53158 218 aa6.77□□□□□ -1.33
CAP1YKL007W PKH3Q03306 898 aaPredicted RBP6.77□□□□□ -1.33
CAP1YKL007W PAC1P39946 494 aaKnown RBP6.76□□□□□ -1.33
CAP1YKL007W TRM1P15565 570 aaKnown RBP6.75□□□□□ -1.33
CAP1YKL007W SDH2P21801 266 aa6.75□□□□□ -1.33
CAP1YKL007W RPA14P50106 137 aa6.75□□□□□ -1.33
CAP1YKL007W ARG8P18544 423 aa6.74□□□□□ -1.33
CAP1YKL007W BRL1P38770 471 aa6.74□□□□□ -1.33
CAP1YKL007W YJU3P28321 313 aa6.73□□□□□ -1.33
CAP1YKL007W ALR1Q08269 859 aa6.73□□□□□ -1.33
CAP1YKL007W TPD3P31383 635 aa6.72□□□□□ -1.33
CAP1YKL007W RSC30P38781 883 aa6.72□□□□□ -1.33
CAP1YKL007W YPR097WQ06839 1073 aa6.72□□□□□ -1.33
CAP1YKL007W RAD59Q12223 238 aa6.72□□□□□ -1.33
CAP1YKL007W YDL206WQ12424 762 aa6.72□□□□□ -1.33
CAP1YKL007W MOD5P07884 428 aa6.71□□□□□ -1.34
CAP1YKL007W RAS1P01119 309 aa6.7□□□□□ -1.34
CAP1YKL007W HXT10P43581 546 aa6.7□□□□□ -1.34
CAP1YKL007W PDC1P06169 563 aaKnown RBP6.69□□□□□ -1.34
CAP1YKL007W CST6P40535 587 aa6.69□□□□□ -1.34
CAP1YKL007W BDP1P46678 594 aa6.69□□□□□ -1.34
CAP1YKL007W FRK1Q03002 865 aaPredicted RBP6.68□□□□□ -1.34
CAP1YKL007W RGA2Q06407 1009 aa6.68□□□□□ -1.34
CAP1YKL007W CSE4P36012 229 aa6.67□□□□□ -1.34
CAP1YKL007W RRD1P40454 393 aaKnown RBP6.67□□□□□ -1.34
CAP1YKL007W TFB3Q03290 321 aa6.67□□□□□ -1.34
CAP1YKL007W HED1Q03937 162 aa6.64□□□□□ -1.35
CAP1YKL007W YBL036CP38197 257 aa6.63□□□□□ -1.35
CAP1YKL007W MAK16P10962 306 aaPredicted RBP6.62□□□□□ -1.35
CAP1YKL007W SYH1Q02875 849 aaKnown RBP6.62□□□□□ -1.35
CAP1YKL007W SPT5P27692 1063 aaKnown RBP6.61□□□□□ -1.35
CAP1YKL007W NAF1P53919 492 aaKnown RBP6.61□□□□□ -1.35
CAP1YKL007W KIP2P28743 706 aa6.6□□□□□ -1.35
CAP1YKL007W PUS5Q06244 254 aa6.6□□□□□ -1.35
CAP1YKL007W CDC4P07834 779 aa6.59□□□□□ -1.35
CAP1YKL007W TRK1P12685 1235 aa6.58□□□□□ -1.36
CAP1YKL007W PKC1P24583 1151 aa6.58□□□□□ -1.36
CAP1YKL007W VAC17P25591 423 aa6.58□□□□□ -1.36
CAP1YKL007W IXR1P33417 597 aa6.58□□□□□ -1.36
CAP1YKL007W DMA2P53924 522 aa6.57□□□□□ -1.36
CAP1YKL007W TEC1P18412 486 aa6.55□□□□□ -1.36
CAP1YKL007W FIG4P42837 879 aa6.55□□□□□ -1.36
CAP1YKL007W SRC1Q03707 834 aa6.55□□□□□ -1.36
CAP1YKL007W GUT2P32191 649 aa6.54□□□□□ -1.36
CAP1YKL007W RTT106P40161 455 aa6.54□□□□□ -1.36
CAP1YKL007W CLA4P48562 842 aa6.54□□□□□ -1.36
CAP1YKL007W RGA1P39083 1007 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms