RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C APP1P53933 587 aa6.34□□□□□ -1.39
SWI3YJL176C ORC1P54784 914 aaPredicted RBP6.34□□□□□ -1.39
SWI3YJL176C REB1P21538 810 aa6.33□□□□□ -1.4
SWI3YJL176C RRP5Q05022 1729 aaKnown RBP6.32□□□□□ -1.4
SWI3YJL176C ENT1Q12518 454 aa6.31□□□□□ -1.4
SWI3YJL176C ADE6P38972 1358 aaKnown RBP6.31□□□□□ -1.4
SWI3YJL176C CHZ1P40019 153 aaPredicted RBP6.31□□□□□ -1.4
SWI3YJL176C TY4B-HP0C2J7 1802 aa6.29□□□□□ -1.4
SWI3YJL176C TY4B-JP47024 1803 aa6.29□□□□□ -1.4
SWI3YJL176C PRP45P28004 379 aaPredicted RBP6.29□□□□□ -1.4
SWI3YJL176C YIL055CP40523 627 aaKnown RBP6.29□□□□□ -1.4
SWI3YJL176C YRF1-2P40105 1681 aa6.29□□□□□ -1.4
SWI3YJL176C ENV9Q08651 330 aa6.28□□□□□ -1.4
SWI3YJL176C FAP1P53971 965 aa6.27□□□□□ -1.4
SWI3YJL176C LEU2P04173 364 aaPredicted RBP6.27□□□□□ -1.41
SWI3YJL176C PRP5P21372 849 aaPredicted RBP6.27□□□□□ -1.41
SWI3YJL176C POL5P39985 1022 aaKnown RBP6.27□□□□□ -1.41
SWI3YJL176C MTR4P47047 1073 aaKnown RBP6.27□□□□□ -1.41
SWI3YJL176C IMH1Q06704 911 aaKnown RBP6.26□□□□□ -1.41
SWI3YJL176C GLN1P32288 370 aaKnown RBP6.25□□□□□ -1.41
SWI3YJL176C CSE4P36012 229 aa6.25□□□□□ -1.41
SWI3YJL176C PRP43P53131 767 aaKnown RBP6.25□□□□□ -1.41
SWI3YJL176C YML133CQ03099 1374 aa6.25□□□□□ -1.41
SWI3YJL176C YLL067CQ07888 1374 aa6.25□□□□□ -1.41
SWI3YJL176C YLL066CQ99208 1374 aa6.25□□□□□ -1.41
SWI3YJL176C MHP1P43638 1398 aa6.24□□□□□ -1.41
SWI3YJL176C RPS24AP0CX31 135 aaKnown RBP6.23□□□□□ -1.41
SWI3YJL176C RPS24BP0CX32 135 aaKnown RBP6.23□□□□□ -1.41
SWI3YJL176C FKH1P40466 484 aa6.23□□□□□ -1.41
SWI3YJL176C MSB3P48566 633 aaPredicted RBP6.23□□□□□ -1.41
SWI3YJL176C YMR074CQ04773 145 aa6.21□□□□□ -1.41
SWI3YJL176C TCB1Q12466 1186 aa6.21□□□□□ -1.42
SWI3YJL176C MLP1Q02455 1875 aaKnown RBP6.2□□□□□ -1.42
SWI3YJL176C RTG3P38165 486 aa6.2□□□□□ -1.42
SWI3YJL176C SLM3Q12093 417 aa6.2□□□□□ -1.42
SWI3YJL176C RSF2P46974 1380 aa6.2□□□□□ -1.42
SWI3YJL176C PDI1P17967 522 aaKnown RBP6.19□□□□□ -1.42
SWI3YJL176C IES2P40154 320 aa6.19□□□□□ -1.42
SWI3YJL176C RTF1P53064 558 aa6.19□□□□□ -1.42
SWI3YJL176C PDS5Q04264 1277 aa6.19□□□□□ -1.42
SWI3YJL176C LEU3P08638 886 aa6.19□□□□□ -1.42
SWI3YJL176C URB1P34241 1764 aaKnown RBP6.18□□□□□ -1.42
SWI3YJL176C DPS1P04802 557 aaKnown RBP6.17□□□□□ -1.42
SWI3YJL176C ROM2P51862 1356 aaKnown RBP6.16□□□□□ -1.42
SWI3YJL176C ENP1P38333 483 aaKnown RBP6.16□□□□□ -1.42
SWI3YJL176C XKS1P42826 600 aa6.16□□□□□ -1.42
SWI3YJL176C TAP42Q04372 366 aa6.16□□□□□ -1.42
SWI3YJL176C YIL177CP40434 1758 aa6.16□□□□□ -1.42
SWI3YJL176C YJL225CP40889 1758 aa6.16□□□□□ -1.42
SWI3YJL176C GAS4Q08271 471 aa6.16□□□□□ -1.42
SWI3YJL176C FKS3Q04952 1785 aa6.15□□□□□ -1.42
SWI3YJL176C GRX4P32642 244 aa6.15□□□□□ -1.42
SWI3YJL176C APC1P53886 1748 aa6.15□□□□□ -1.43
SWI3YJL176C AUS1Q08409 1394 aa6.14□□□□□ -1.43
SWI3YJL176C PRI1P10363 409 aa6.14□□□□□ -1.43
SWI3YJL176C SEC3P33332 1336 aaKnown RBP6.14□□□□□ -1.43
SWI3YJL176C BUD31P25337 157 aaPredicted RBP6.14□□□□□ -1.43
SWI3YJL176C DOT5P40553 215 aa6.14□□□□□ -1.43
SWI3YJL176C EDE1P34216 1381 aa6.13□□□□□ -1.43
SWI3YJL176C YEF3P16521 1044 aaKnown RBP6.13□□□□□ -1.43
SWI3YJL176C UBP1P25037 809 aa6.13□□□□□ -1.43
SWI3YJL176C YKL133CP36066 463 aa6.13□□□□□ -1.43
SWI3YJL176C FOX2Q02207 900 aaKnown RBP6.12□□□□□ -1.43
SWI3YJL176C HIM1Q06674 414 aa6.12□□□□□ -1.43
SWI3YJL176C YRF1-3P0CX14 1859 aa6.12□□□□□ -1.43
SWI3YJL176C YRF1-7P0CX15 1859 aa6.12□□□□□ -1.43
SWI3YJL176C YRF1-6P53819 1859 aa6.12□□□□□ -1.43
SWI3YJL176C KAR2P16474 682 aaKnown RBP6.11□□□□□ -1.43
SWI3YJL176C SIR4P11978 1358 aa6.11□□□□□ -1.43
SWI3YJL176C RPN11P43588 306 aaKnown RBP6.11□□□□□ -1.43
SWI3YJL176C MEC3Q02574 474 aa6.1□□□□□ -1.43
SWI3YJL176C RPO41P13433 1351 aaKnown RBP6.1□□□□□ -1.43
SWI3YJL176C YJL181WP46987 611 aa6.09□□□□□ -1.43
SWI3YJL176C LAM6Q08001 693 aa6.09□□□□□ -1.43
SWI3YJL176C RCR1P38212 213 aa6.09□□□□□ -1.43
SWI3YJL176C YRF1-4O13559 1382 aa6.09□□□□□ -1.44
SWI3YJL176C SNF2P22082 1703 aa6.08□□□□□ -1.44
SWI3YJL176C COBP00163 385 aa6.08□□□□□ -1.44
SWI3YJL176C PRP40P33203 583 aaKnown RBP6.08□□□□□ -1.44
SWI3YJL176C NST1P53935 1240 aa6.08□□□□□ -1.44
SWI3YJL176C PSD2P53037 1138 aaKnown RBP6.07□□□□□ -1.44
SWI3YJL176C PAP2P53632 584 aaKnown RBP6.07□□□□□ -1.44
SWI3YJL176C TRK1P12685 1235 aa6.06□□□□□ -1.44
SWI3YJL176C YKR075CP36155 307 aa6.06□□□□□ -1.44
SWI3YJL176C FRK1Q03002 865 aaPredicted RBP6.06□□□□□ -1.44
SWI3YJL176C NPR2P39923 615 aa6.06□□□□□ -1.44
SWI3YJL176C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
SWI3YJL176C ADE16P54113 591 aaKnown RBP6.06□□□□□ -1.44
SWI3YJL176C DSD1P53095 428 aa6.04□□□□□ -1.44
SWI3YJL176C ATG13Q06628 738 aa6.04□□□□□ -1.44
SWI3YJL176C CTF4Q01454 927 aa6.03□□□□□ -1.44
SWI3YJL176C INP54Q08227 384 aaKnown RBP6.03□□□□□ -1.44
SWI3YJL176C SPT7P35177 1332 aa6.03□□□□□ -1.44
SWI3YJL176C AKL1P38080 1108 aaKnown RBP6.03□□□□□ -1.44
SWI3YJL176C YBL086CP38177 466 aa6.03□□□□□ -1.44
SWI3YJL176C GTT3P39996 337 aa6.03□□□□□ -1.44
SWI3YJL176C LYS4P49367 693 aaPredicted RBP6.03□□□□□ -1.44
SWI3YJL176C HSP104P31539 908 aaKnown RBP6.02□□□□□ -1.45
SWI3YJL176C ALD2P47771 506 aa6.02□□□□□ -1.45
SWI3YJL176C OSM1P21375 501 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms