RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C TY1A-JR2P47099 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-DR1Q03856 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-ML1Q04706 440 aaKnown RBP9.59□□□□□ -0.87
CTK2YJL006C TY1A-BRQ12217 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-NL2Q12470 440 aa9.59□□□□□ -0.87
CTK2YJL006C TY1A-GR2Q12485 440 aa9.59□□□□□ -0.87
CTK2YJL006C SEC2P17065 759 aa9.58□□□□□ -0.88
CTK2YJL006C SPT16P32558 1035 aaKnown RBP9.56□□□□□ -0.88
CTK2YJL006C CST6P40535 587 aa9.52□□□□□ -0.89
CTK2YJL006C DMA1P38823 416 aa9.5□□□□□ -0.89
CTK2YJL006C PSE1P32337 1089 aaKnown RBP9.49□□□□□ -0.89
CTK2YJL006C RRN7P40992 514 aa9.49□□□□□ -0.89
CTK2YJL006C MAM3Q12296 706 aa9.48□□□□□ -0.89
CTK2YJL006C KEX2P13134 814 aa9.47□□□□□ -0.89
CTK2YJL006C PAT1P25644 796 aaKnown RBP9.47□□□□□ -0.89
CTK2YJL006C ERF2Q06551 359 aa9.46□□□□□ -0.9
CTK2YJL006C LAM6Q08001 693 aa9.46□□□□□ -0.9
CTK2YJL006C CLA4P48562 842 aa9.45□□□□□ -0.9
CTK2YJL006C SAS10Q12136 610 aaPredicted RBP9.45□□□□□ -0.9
CTK2YJL006C AIR1P40507 360 aaKnown RBP9.44□□□□□ -0.9
CTK2YJL006C FRK1Q03002 865 aaPredicted RBP9.44□□□□□ -0.9
CTK2YJL006C DSF2P38213 736 aa9.41□□□□□ -0.9
CTK2YJL006C BDP1P46678 594 aa9.41□□□□□ -0.9
CTK2YJL006C CLB5P30283 435 aa9.4□□□□□ -0.9
CTK2YJL006C IES2P40154 320 aa9.4□□□□□ -0.9
CTK2YJL006C RGA1P39083 1007 aa9.37□□□□□ -0.91
CTK2YJL006C BRE2P43132 505 aa9.35□□□□□ -0.91
CTK2YJL006C SPB4P25808 606 aaPredicted RBP9.34□□□□□ -0.91
CTK2YJL006C PAC1P39946 494 aaKnown RBP9.34□□□□□ -0.91
CTK2YJL006C NUP42P49686 430 aaKnown RBP9.34□□□□□ -0.91
CTK2YJL006C GCR2Q01722 534 aa9.33□□□□□ -0.92
CTK2YJL006C CDC4P07834 779 aa9.32□□□□□ -0.92
CTK2YJL006C TEA1P47988 759 aa9.32□□□□□ -0.92
CTK2YJL006C RTF1P53064 558 aa9.31□□□□□ -0.92
CTK2YJL006C TUB4P53378 473 aa9.31□□□□□ -0.92
CTK2YJL006C HED1Q03937 162 aa9.31□□□□□ -0.92
CTK2YJL006C YNL115CP53925 644 aa9.3□□□□□ -0.92
CTK2YJL006C AGE1Q04412 482 aa9.3□□□□□ -0.92
CTK2YJL006C MOD5P07884 428 aa9.27□□□□□ -0.93
CTK2YJL006C SIT4P20604 311 aa9.27□□□□□ -0.93
CTK2YJL006C DIT2P21595 489 aa9.27□□□□□ -0.93
CTK2YJL006C NIS1P53939 407 aa9.25□□□□□ -0.93
CTK2YJL006C RGA2Q06407 1009 aa9.25□□□□□ -0.93
CTK2YJL006C PUS5Q06244 254 aa9.22□□□□□ -0.93
CTK2YJL006C GAR1P28007 205 aaKnown RBP9.21□□□□□ -0.94
CTK2YJL006C KXD1P53158 218 aa9.17□□□□□ -0.94
CTK2YJL006C FPK1P53739 893 aa9.17□□□□□ -0.94
CTK2YJL006C MET32Q12041 191 aa9.17□□□□□ -0.94
CTK2YJL006C SLY41P22215 453 aa9.16□□□□□ -0.94
CTK2YJL006C ASH1P34233 588 aa9.16□□□□□ -0.94
CTK2YJL006C YPL062WQ02781 134 aa9.16□□□□□ -0.94
CTK2YJL006C GBP2P25555 427 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
CTK2YJL006C YMR196WQ04336 1088 aa9.15□□□□□ -0.94
CTK2YJL006C HST3P53687 447 aa9.13□□□□□ -0.95
CTK2YJL006C AFT1P22149 690 aa9.12□□□□□ -0.95
CTK2YJL006C MET22P32179 357 aa9.12□□□□□ -0.95
CTK2YJL006C TPD3P31383 635 aa9.11□□□□□ -0.95
CTK2YJL006C HXT10P43581 546 aa9.11□□□□□ -0.95
CTK2YJL006C PDC1P06169 563 aaKnown RBP9.09□□□□□ -0.95
CTK2YJL006C RRD1P40454 393 aaKnown RBP9.08□□□□□ -0.96
CTK2YJL006C ENV9Q08651 330 aa9.08□□□□□ -0.96
CTK2YJL006C SCJ1P25303 377 aa9.07□□□□□ -0.96
CTK2YJL006C PUS6P53294 404 aa9.07□□□□□ -0.96
CTK2YJL006C ATF2P53296 535 aa9.06□□□□□ -0.96
CTK2YJL006C TBF1Q02457 562 aa9.05□□□□□ -0.96
CTK2YJL006C SYH1Q02875 849 aaKnown RBP9.05□□□□□ -0.96
CTK2YJL006C YDR444WQ04093 687 aa9.05□□□□□ -0.96
CTK2YJL006C HST2P53686 357 aa9.04□□□□□ -0.96
CTK2YJL006C YDL206WQ12424 762 aa9.04□□□□□ -0.96
CTK2YJL006C ALR1Q08269 859 aa9.03□□□□□ -0.96
CTK2YJL006C RPA14P50106 137 aa9.02□□□□□ -0.97
CTK2YJL006C MMP1Q12372 583 aa9.02□□□□□ -0.97
CTK2YJL006C YJR115WP47152 169 aa9.01□□□□□ -0.97
CTK2YJL006C YPR097WQ06839 1073 aa9.01□□□□□ -0.97
CTK2YJL006C TRM1P15565 570 aaKnown RBP9□□□□□ -0.97
CTK2YJL006C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
CTK2YJL006C KIP2P28743 706 aa8.98□□□□□ -0.97
CTK2YJL006C GLN1P32288 370 aaKnown RBP8.98□□□□□ -0.97
CTK2YJL006C YNR021WP53723 404 aaKnown RBP8.98□□□□□ -0.97
CTK2YJL006C LCB5Q06147 687 aaKnown RBP8.98□□□□□ -0.97
CTK2YJL006C GLC3P32775 704 aa8.96□□□□□ -0.98
CTK2YJL006C MSB3P48566 633 aaPredicted RBP8.96□□□□□ -0.98
CTK2YJL006C ESS1P22696 170 aa8.95□□□□□ -0.98
CTK2YJL006C UGA3P26370 528 aa8.93□□□□□ -0.98
CTK2YJL006C IXR1P33417 597 aa8.93□□□□□ -0.98
CTK2YJL006C TYW1Q08960 810 aaKnown RBP8.92□□□□□ -0.98
CTK2YJL006C YJU3P28321 313 aa8.91□□□□□ -0.98
CTK2YJL006C MRT4P33201 236 aaKnown RBP8.87□□□□□ -0.99
CTK2YJL006C PTK2P47116 818 aaKnown RBP8.87□□□□□ -0.99
CTK2YJL006C YDL176WQ12027 708 aa8.87□□□□□ -0.99
CTK2YJL006C SRF1Q12516 437 aa8.87□□□□□ -0.99
CTK2YJL006C RSC30P38781 883 aa8.84□□□□□ -0.99
CTK2YJL006C KTR1P27810 393 aaKnown RBP8.83□□□□□ -1
CTK2YJL006C PKH3Q03306 898 aaPredicted RBP8.83□□□□□ -1
CTK2YJL006C AIM7Q12156 149 aa8.83□□□□□ -1
CTK2YJL006C VAC17P25591 423 aa8.82□□□□□ -1
CTK2YJL006C OPT2Q06593 877 aa8.81□□□□□ -1
CTK2YJL006C RTT106P40161 455 aa8.8□□□□□ -1
CTK2YJL006C YLR346CQ06139 101 aa8.8□□□□□ -1
CTK2YJL006C ARG8P18544 423 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms