RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C TY1A-GR3P0CX67 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-LR1P0CX68 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-MR2P0CX69 440 aa8.94□□□□□ -0.98
PCI8YIL071C PAT1P25644 796 aaKnown RBP8.94□□□□□ -0.98
PCI8YIL071C GAR1P28007 205 aaKnown RBP8.94□□□□□ -0.98
PCI8YIL071C TY1A-JR2P47099 440 aa8.94□□□□□ -0.98
PCI8YIL071C CLA4P48562 842 aa8.94□□□□□ -0.98
PCI8YIL071C FRK1Q03002 865 aaPredicted RBP8.94□□□□□ -0.98
PCI8YIL071C TY1A-DR1Q03856 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-ML1Q04706 440 aaKnown RBP8.94□□□□□ -0.98
PCI8YIL071C TY1A-BRQ12217 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-NL2Q12470 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-GR2Q12485 440 aa8.94□□□□□ -0.98
PCI8YIL071C COX6P00427 148 aa8.93□□□□□ -0.98
PCI8YIL071C MVP1P40959 511 aaKnown RBP8.93□□□□□ -0.98
PCI8YIL071C SEC2P17065 759 aa8.92□□□□□ -0.98
PCI8YIL071C RRN7P40992 514 aa8.91□□□□□ -0.98
PCI8YIL071C VPS70P47161 811 aa8.91□□□□□ -0.98
PCI8YIL071C CDC4P07834 779 aa8.88□□□□□ -0.99
PCI8YIL071C BDP1P46678 594 aa8.87□□□□□ -0.99
PCI8YIL071C YPR109WQ06104 294 aa8.87□□□□□ -0.99
PCI8YIL071C RGR1P19263 1082 aa8.84□□□□□ -0.99
PCI8YIL071C HED1Q03937 162 aa8.82□□□□□ -1
PCI8YIL071C KEX2P13134 814 aa8.78□□□□□ -1
PCI8YIL071C MET22P32179 357 aa8.76□□□□□ -1.01
PCI8YIL071C ENV9Q08651 330 aa8.76□□□□□ -1.01
PCI8YIL071C ERF2Q06551 359 aa8.72□□□□□ -1.01
PCI8YIL071C YDR444WQ04093 687 aa8.7□□□□□ -1.02
PCI8YIL071C CLB5P30283 435 aa8.68□□□□□ -1.02
PCI8YIL071C PSE1P32337 1089 aaKnown RBP8.68□□□□□ -1.02
PCI8YIL071C PAC1P39946 494 aaKnown RBP8.68□□□□□ -1.02
PCI8YIL071C HST3P53687 447 aa8.68□□□□□ -1.02
PCI8YIL071C ASH1P34233 588 aa8.67□□□□□ -1.02
PCI8YIL071C PBS2P08018 668 aa8.66□□□□□ -1.02
PCI8YIL071C CKB1P43639 278 aa8.66□□□□□ -1.02
PCI8YIL071C MOD5P07884 428 aa8.65□□□□□ -1.02
PCI8YIL071C AFT1P22149 690 aa8.65□□□□□ -1.02
PCI8YIL071C MET32Q12041 191 aa8.65□□□□□ -1.02
PCI8YIL071C TUB4P53378 473 aa8.64□□□□□ -1.03
PCI8YIL071C RTF1P53064 558 aa8.62□□□□□ -1.03
PCI8YIL071C LCB5Q06147 687 aaKnown RBP8.62□□□□□ -1.03
PCI8YIL071C PUS5Q06244 254 aa8.62□□□□□ -1.03
PCI8YIL071C AGE1Q04412 482 aa8.61□□□□□ -1.03
PCI8YIL071C YNL115CP53925 644 aa8.57□□□□□ -1.04
PCI8YIL071C MAM3Q12296 706 aa8.57□□□□□ -1.04
PCI8YIL071C KXD1P53158 218 aa8.54□□□□□ -1.04
PCI8YIL071C RRD1P40454 393 aaKnown RBP8.54□□□□□ -1.04
PCI8YIL071C YJR115WP47152 169 aa8.53□□□□□ -1.04
PCI8YIL071C TEA1P47988 759 aa8.51□□□□□ -1.05
PCI8YIL071C YDL176WQ12027 708 aa8.51□□□□□ -1.05
PCI8YIL071C SYH1Q02875 849 aaKnown RBP8.49□□□□□ -1.05
PCI8YIL071C SIT4P20604 311 aa8.48□□□□□ -1.05
PCI8YIL071C TPD3P31383 635 aa8.48□□□□□ -1.05
PCI8YIL071C IES2P40154 320 aa8.48□□□□□ -1.05
PCI8YIL071C MSB3P48566 633 aaPredicted RBP8.48□□□□□ -1.05
PCI8YIL071C HXT10P43581 546 aa8.47□□□□□ -1.05
PCI8YIL071C DSF2P38213 736 aa8.44□□□□□ -1.06
PCI8YIL071C NIS1P53939 407 aa8.44□□□□□ -1.06
PCI8YIL071C UGA3P26370 528 aa8.43□□□□□ -1.06
PCI8YIL071C SRF1Q12516 437 aa8.42□□□□□ -1.06
PCI8YIL071C PDC1P06169 563 aaKnown RBP8.41□□□□□ -1.06
PCI8YIL071C SLY41P22215 453 aa8.4□□□□□ -1.06
PCI8YIL071C KIP2P28743 706 aa8.39□□□□□ -1.07
PCI8YIL071C YMR196WQ04336 1088 aa8.39□□□□□ -1.07
PCI8YIL071C YLR346CQ06139 101 aa8.39□□□□□ -1.07
PCI8YIL071C CAF120P53836 1060 aa8.38□□□□□ -1.07
PCI8YIL071C TBF1Q02457 562 aa8.38□□□□□ -1.07
PCI8YIL071C NUP42P49686 430 aaKnown RBP8.37□□□□□ -1.07
PCI8YIL071C ALR1Q08269 859 aa8.37□□□□□ -1.07
PCI8YIL071C PTK2P47116 818 aaKnown RBP8.36□□□□□ -1.07
PCI8YIL071C RPA14P50106 137 aa8.34□□□□□ -1.07
PCI8YIL071C FPK1P53739 893 aa8.34□□□□□ -1.07
PCI8YIL071C OPT2Q06593 877 aa8.34□□□□□ -1.07
PCI8YIL071C ACO2P39533 789 aa8.33□□□□□ -1.08
PCI8YIL071C YDL206WQ12424 762 aa8.33□□□□□ -1.08
PCI8YIL071C IXR1P33417 597 aa8.32□□□□□ -1.08
PCI8YIL071C PUS6P53294 404 aa8.32□□□□□ -1.08
PCI8YIL071C TYW1Q08960 810 aaKnown RBP8.31□□□□□ -1.08
PCI8YIL071C SPB4P25808 606 aaPredicted RBP8.3□□□□□ -1.08
PCI8YIL071C YPR097WQ06839 1073 aa8.3□□□□□ -1.08
PCI8YIL071C RTT106P40161 455 aa8.29□□□□□ -1.08
PCI8YIL071C DIT2P21595 489 aa8.29□□□□□ -1.08
PCI8YIL071C SAS10Q12136 610 aaPredicted RBP8.29□□□□□ -1.08
PCI8YIL071C NUP85P46673 744 aa8.28□□□□□ -1.08
PCI8YIL071C MRT4P33201 236 aaKnown RBP8.27□□□□□ -1.09
PCI8YIL071C GLY1P37303 387 aaKnown RBP8.27□□□□□ -1.09
PCI8YIL071C SCW11P53189 542 aa8.26□□□□□ -1.09
PCI8YIL071C YGR035CP53222 116 aa8.26□□□□□ -1.09
PCI8YIL071C MTC5Q03897 1148 aa8.26□□□□□ -1.09
PCI8YIL071C TRM1P15565 570 aaKnown RBP8.24□□□□□ -1.09
PCI8YIL071C MIP1P15801 1254 aa8.24□□□□□ -1.09
PCI8YIL071C TRK2P28584 889 aa8.24□□□□□ -1.09
PCI8YIL071C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
PCI8YIL071C HST2P53686 357 aa8.22□□□□□ -1.09
PCI8YIL071C SCJ1P25303 377 aa8.2□□□□□ -1.1
PCI8YIL071C YIR007WP40566 764 aa8.2□□□□□ -1.1
PCI8YIL071C MMP1Q12372 583 aa8.2□□□□□ -1.1
PCI8YIL071C TY1A-BLQ12266 440 aa8.19□□□□□ -1.1
PCI8YIL071C LSC2P53312 427 aa8.18□□□□□ -1.1
PCI8YIL071C ARG82P07250 355 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms