RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W NUP42P49686 430 aaKnown RBP6.92□□□□□ -1.3
NMD3YHR170W MYO4P32492 1471 aa6.92□□□□□ -1.3
NMD3YHR170W IES2P40154 320 aa6.91□□□□□ -1.3
NMD3YHR170W AI4P03878 556 aa6.91□□□□□ -1.3
NMD3YHR170W DIT2P21595 489 aa6.91□□□□□ -1.3
NMD3YHR170W PAN1P32521 1480 aa6.9□□□□□ -1.3
NMD3YHR170W PTC4P38089 393 aa6.9□□□□□ -1.31
NMD3YHR170W DAN4P47179 1161 aa6.9□□□□□ -1.31
NMD3YHR170W TY1B-JR2P47100 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-ER2Q03619 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-MR1Q04214 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-MR2Q04670 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-LR1Q12088 1755 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W TY1B-NL1Q12112 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-GR1Q12141 1755 aa6.89□□□□□ -1.31
NMD3YHR170W TY1B-BLQ12490 1755 aa6.89□□□□□ -1.31
NMD3YHR170W RPN1P38764 993 aaKnown RBP6.89□□□□□ -1.31
NMD3YHR170W SPP41P38904 1435 aa6.89□□□□□ -1.31
NMD3YHR170W DNF1P32660 1571 aa6.89□□□□□ -1.31
NMD3YHR170W RAD54P32863 898 aa6.88□□□□□ -1.31
NMD3YHR170W RPA190P10964 1664 aaKnown RBP6.88□□□□□ -1.31
NMD3YHR170W MLP2P40457 1679 aa6.87□□□□□ -1.31
NMD3YHR170W JIP4Q03361 876 aa6.86□□□□□ -1.31
NMD3YHR170W SNQ2P32568 1501 aaKnown RBP6.86□□□□□ -1.31
NMD3YHR170W LDB19Q12502 818 aa6.86□□□□□ -1.31
NMD3YHR170W VTH1P40438 1549 aa6.86□□□□□ -1.31
NMD3YHR170W VTH2P40890 1549 aa6.86□□□□□ -1.31
NMD3YHR170W YNR021WP53723 404 aaKnown RBP6.85□□□□□ -1.31
NMD3YHR170W SLI15P38283 698 aa6.84□□□□□ -1.31
NMD3YHR170W YNL035CP53962 389 aaKnown RBP6.84□□□□□ -1.31
NMD3YHR170W KIC1P38692 1080 aa6.83□□□□□ -1.32
NMD3YHR170W TSC11P40061 1430 aa6.83□□□□□ -1.32
NMD3YHR170W GLC3P32775 704 aa6.82□□□□□ -1.32
NMD3YHR170W ULS1Q08562 1619 aa6.82□□□□□ -1.32
NMD3YHR170W RTG1P32607 177 aa6.82□□□□□ -1.32
NMD3YHR170W STH1P32597 1359 aa6.82□□□□□ -1.32
NMD3YHR170W NTE1Q04958 1679 aa6.82□□□□□ -1.32
NMD3YHR170W PDR15Q04182 1529 aaKnown RBP6.81□□□□□ -1.32
NMD3YHR170W ORC6P38826 435 aa6.81□□□□□ -1.32
NMD3YHR170W TRM732Q03496 1420 aa6.8□□□□□ -1.32
NMD3YHR170W MID1P41821 548 aa6.8□□□□□ -1.32
NMD3YHR170W RPO21P04050 1733 aaKnown RBP6.8□□□□□ -1.32
NMD3YHR170W SEC61P32915 480 aa6.78□□□□□ -1.32
NMD3YHR170W PML39Q03760 334 aa6.78□□□□□ -1.32
NMD3YHR170W CDC73Q06697 393 aa6.78□□□□□ -1.32
NMD3YHR170W GAP1P19145 602 aaPredicted RBP6.77□□□□□ -1.33
NMD3YHR170W YRF1-1P0CX20 1796 aa6.76□□□□□ -1.33
NMD3YHR170W YRF1-5P0CX21 1796 aa6.76□□□□□ -1.33
NMD3YHR170W YRF1-8P0CX22 1796 aa6.76□□□□□ -1.33
NMD3YHR170W PSE1P32337 1089 aaKnown RBP6.76□□□□□ -1.33
NMD3YHR170W AIM7Q12156 149 aa6.76□□□□□ -1.33
NMD3YHR170W KIN1P13185 1064 aa6.75□□□□□ -1.33
NMD3YHR170W FKH1P40466 484 aa6.75□□□□□ -1.33
NMD3YHR170W NCR1Q12200 1170 aa6.75□□□□□ -1.33
NMD3YHR170W SNT2P53127 1403 aa6.75□□□□□ -1.33
NMD3YHR170W RGR1P19263 1082 aa6.74□□□□□ -1.33
NMD3YHR170W NUP159P40477 1460 aa6.73□□□□□ -1.33
NMD3YHR170W MVP1P40959 511 aaKnown RBP6.73□□□□□ -1.33
NMD3YHR170W ATF2P53296 535 aa6.72□□□□□ -1.33
NMD3YHR170W MPC54Q08550 464 aa6.72□□□□□ -1.33
NMD3YHR170W AIR2Q12476 344 aaKnown RBP6.72□□□□□ -1.33
NMD3YHR170W GEA1P47102 1408 aaPredicted RBP6.71□□□□□ -1.34
NMD3YHR170W YDL129WQ07555 291 aa6.7□□□□□ -1.34
NMD3YHR170W TY3B-GQ99315 1547 aa6.7□□□□□ -1.34
NMD3YHR170W PEX29Q03370 554 aa6.69□□□□□ -1.34
NMD3YHR170W YDR344CQ05510 147 aa6.69□□□□□ -1.34
NMD3YHR170W DPL1Q05567 589 aa6.69□□□□□ -1.34
NMD3YHR170W MET5P47169 1442 aa6.69□□□□□ -1.34
NMD3YHR170W CSC1Q06538 782 aa6.69□□□□□ -1.34
NMD3YHR170W IRC20Q06554 1556 aa6.68□□□□□ -1.34
NMD3YHR170W YBT1P32386 1661 aa6.68□□□□□ -1.34
NMD3YHR170W SPO14P36126 1683 aa6.67□□□□□ -1.34
NMD3YHR170W RTT106P40161 455 aa6.67□□□□□ -1.34
NMD3YHR170W GEA2P39993 1459 aaKnown RBP6.67□□□□□ -1.34
NMD3YHR170W TFG1P41895 735 aaPredicted RBP6.66□□□□□ -1.34
NMD3YHR170W NMA111P53920 997 aa6.66□□□□□ -1.34
NMD3YHR170W DMA2P53924 522 aa6.66□□□□□ -1.34
NMD3YHR170W YPR109WQ06104 294 aa6.66□□□□□ -1.34
NMD3YHR170W SAP30P38429 201 aa6.65□□□□□ -1.34
NMD3YHR170W GUA1P38625 525 aaKnown RBP6.65□□□□□ -1.34
NMD3YHR170W RPP1BP10622 106 aaKnown RBP6.65□□□□□ -1.35
NMD3YHR170W TEA1P47988 759 aa6.65□□□□□ -1.35
NMD3YHR170W TFB4Q12004 338 aa6.65□□□□□ -1.35
NMD3YHR170W VPS15P22219 1454 aa6.64□□□□□ -1.35
NMD3YHR170W TUM1Q08686 304 aaKnown RBP6.63□□□□□ -1.35
NMD3YHR170W ISU2Q12056 156 aa6.63□□□□□ -1.35
NMD3YHR170W YRR1Q12172 810 aa6.61□□□□□ -1.35
NMD3YHR170W GDB1Q06625 1536 aa6.61□□□□□ -1.35
NMD3YHR170W ARH1P48360 493 aa6.61□□□□□ -1.35
NMD3YHR170W PEX21P50091 288 aa6.61□□□□□ -1.35
NMD3YHR170W NIS1P53939 407 aa6.61□□□□□ -1.35
NMD3YHR170W PDR12Q02785 1511 aa6.61□□□□□ -1.35
NMD3YHR170W PDR10P51533 1564 aa6.6□□□□□ -1.35
NMD3YHR170W IKI3Q06706 1349 aaKnown RBP6.6□□□□□ -1.35
NMD3YHR170W MET10P39692 1035 aa6.6□□□□□ -1.35
NMD3YHR170W BUD3P25558 1636 aa6.59□□□□□ -1.35
NMD3YHR170W NUP170P38181 1502 aa6.59□□□□□ -1.35
NMD3YHR170W CLB5P30283 435 aa6.59□□□□□ -1.35
NMD3YHR170W NUP157P40064 1391 aaKnown RBP6.58□□□□□ -1.36
NMD3YHR170W PDR1P12383 1068 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms