RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeastyeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRM3YHR031C CLA4P48562 842 aa3.89□□□□□ -1.79
RRM3YHR031C SKI3P17883 1432 aaKnown RBP3.89□□□□□ -1.79
RRM3YHR031C CST6P40535 587 aa3.89□□□□□ -1.79
RRM3YHR031C ENV11P53246 860 aa3.89□□□□□ -1.79
RRM3YHR031C QCR6P00127 147 aa3.88□□□□□ -1.79
RRM3YHR031C RPP1BP10622 106 aaKnown RBP3.87□□□□□ -1.79
RRM3YHR031C LAM6Q08001 693 aa3.87□□□□□ -1.79
RRM3YHR031C CDC4P07834 779 aa3.86□□□□□ -1.79
RRM3YHR031C DSF2P38213 736 aa3.86□□□□□ -1.79
RRM3YHR031C YLR326WQ06170 240 aaKnown RBP3.86□□□□□ -1.79
RRM3YHR031C PSH1Q12161 406 aa3.86□□□□□ -1.79
RRM3YHR031C STR2P47164 639 aa3.85□□□□□ -1.79
RRM3YHR031C YDR444WQ04093 687 aa3.85□□□□□ -1.79
RRM3YHR031C NOP8Q08287 484 aaPredicted RBP3.85□□□□□ -1.79
RRM3YHR031C PLP2Q12017 286 aa3.85□□□□□ -1.79
RRM3YHR031C PBS2P08018 668 aa3.84□□□□□ -1.79
RRM3YHR031C UBP14P38237 781 aaKnown RBP3.84□□□□□ -1.79
RRM3YHR031C HSP82P02829 709 aaKnown RBP3.83□□□□□ -1.8
RRM3YHR031C PCS60P38137 543 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
RRM3YHR031C SPT2P06843 333 aaPredicted RBP3.83□□□□□ -1.8
RRM3YHR031C RIX1P38883 763 aaPredicted RBP3.83□□□□□ -1.8
RRM3YHR031C YDL176WQ12027 708 aa3.83□□□□□ -1.8
RRM3YHR031C SPT7P35177 1332 aa3.82□□□□□ -1.8
RRM3YHR031C SNU71P53207 620 aaKnown RBP3.82□□□□□ -1.8
RRM3YHR031C YML020WQ03722 664 aa3.82□□□□□ -1.8
RRM3YHR031C TOP1P04786 769 aa3.82□□□□□ -1.8
RRM3YHR031C RAD54P32863 898 aa3.82□□□□□ -1.8
RRM3YHR031C ENP1P38333 483 aaKnown RBP3.82□□□□□ -1.8
RRM3YHR031C FPR3P38911 411 aaKnown RBP3.82□□□□□ -1.8
RRM3YHR031C ISM1P48526 1002 aa3.82□□□□□ -1.8
RRM3YHR031C YGR130CP53278 816 aa3.82□□□□□ -1.8
RRM3YHR031C YRR1Q12172 810 aa3.82□□□□□ -1.8
RRM3YHR031C LCB5Q06147 687 aaKnown RBP3.81□□□□□ -1.8
RRM3YHR031C RNA1P11745 407 aaKnown RBP3.8□□□□□ -1.8
RRM3YHR031C VHR2P40041 505 aa3.8□□□□□ -1.8
RRM3YHR031C MTC5Q03897 1148 aa3.8□□□□□ -1.8
RRM3YHR031C CLC1P17891 233 aa3.8□□□□□ -1.8
RRM3YHR031C FUN12P39730 1002 aaKnown RBP3.8□□□□□ -1.8
RRM3YHR031C FRK1Q03002 865 aaPredicted RBP3.8□□□□□ -1.8
RRM3YHR031C FPR4Q06205 392 aaPredicted RBP3.8□□□□□ -1.8
RRM3YHR031C RLP24Q07915 199 aaKnown RBP3.8□□□□□ -1.8
RRM3YHR031C NUD1P32336 851 aa3.79□□□□□ -1.8
RRM3YHR031C SPT16P32558 1035 aaKnown RBP3.79□□□□□ -1.8
RRM3YHR031C PEX21P50091 288 aa3.79□□□□□ -1.8
RRM3YHR031C YNR021WP53723 404 aaKnown RBP3.79□□□□□ -1.8
RRM3YHR031C REF2P42073 533 aaPredicted RBP3.79□□□□□ -1.8
RRM3YHR031C HED1Q03937 162 aa3.79□□□□□ -1.8
RRM3YHR031C BDP1P46678 594 aa3.78□□□□□ -1.8
RRM3YHR031C MAM3Q12296 706 aa3.78□□□□□ -1.8
RRM3YHR031C KIN1P13185 1064 aa3.78□□□□□ -1.81
RRM3YHR031C SEC3P33332 1336 aaKnown RBP3.77□□□□□ -1.81
RRM3YHR031C GAP1P19145 602 aaPredicted RBP3.77□□□□□ -1.81
RRM3YHR031C IES2P40154 320 aa3.77□□□□□ -1.81
RRM3YHR031C NUP42P49686 430 aaKnown RBP3.77□□□□□ -1.81
RRM3YHR031C TFB4Q12004 338 aa3.77□□□□□ -1.81
RRM3YHR031C TCB3Q03640 1545 aaKnown RBP3.76□□□□□ -1.81
RRM3YHR031C TY1A-DR4O74302 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-HP0C2I4 478 aaKnown RBP3.76□□□□□ -1.81
RRM3YHR031C TY1A-AP0CX57 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-PR1P0CX58 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-ORP0CX59 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-PR2P0CX60 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-DR5P0CX65 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-ER2P0CX66 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-GR3P0CX67 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-LR1P0CX68 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-MR2P0CX69 440 aa3.76□□□□□ -1.81
RRM3YHR031C GLC3P32775 704 aa3.76□□□□□ -1.81
RRM3YHR031C NPL4P33755 580 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-JR2P47099 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-DR1Q03856 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-ML1Q04706 440 aaKnown RBP3.76□□□□□ -1.81
RRM3YHR031C TY1A-BRQ12217 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-NL2Q12470 440 aa3.76□□□□□ -1.81
RRM3YHR031C TY1A-GR2Q12485 440 aa3.76□□□□□ -1.81
RRM3YHR031C DIT2P21595 489 aa3.76□□□□□ -1.81
RRM3YHR031C SPC110P32380 944 aa3.76□□□□□ -1.81
RRM3YHR031C NMD2P38798 1089 aaKnown RBP3.76□□□□□ -1.81
RRM3YHR031C MDG1P53885 366 aa3.76□□□□□ -1.81
RRM3YHR031C SEC2P17065 759 aa3.75□□□□□ -1.81
RRM3YHR031C RPS0AP32905 252 aaKnown RBP3.75□□□□□ -1.81
RRM3YHR031C CSC1Q06538 782 aa3.75□□□□□ -1.81
RRM3YHR031C AIM7Q12156 149 aa3.75□□□□□ -1.81
RRM3YHR031C YTA7P40340 1379 aa3.75□□□□□ -1.81
RRM3YHR031C COX6P00427 148 aa3.75□□□□□ -1.81
RRM3YHR031C PIL1P53252 339 aaKnown RBP3.75□□□□□ -1.81
RRM3YHR031C TUM1Q08686 304 aaKnown RBP3.75□□□□□ -1.81
RRM3YHR031C INO80P53115 1489 aa3.74□□□□□ -1.81
RRM3YHR031C GCD11P32481 527 aaKnown RBP3.74□□□□□ -1.81
RRM3YHR031C MAK21Q12176 1025 aaKnown RBP3.74□□□□□ -1.81
RRM3YHR031C SGS1P35187 1447 aa3.74□□□□□ -1.81
RRM3YHR031C AFT1P22149 690 aa3.73□□□□□ -1.81
RRM3YHR031C IME2P32581 645 aa3.73□□□□□ -1.81
RRM3YHR031C SLX8P40072 274 aa3.73□□□□□ -1.81
RRM3YHR031C YNL011CP53980 444 aa3.73□□□□□ -1.81
RRM3YHR031C RRN7P40992 514 aa3.72□□□□□ -1.81
RRM3YHR031C SPA2P23201 1466 aaKnown RBP3.72□□□□□ -1.81
RRM3YHR031C PAT1P25644 796 aaKnown RBP3.72□□□□□ -1.81
RRM3YHR031C ASH1P34233 588 aa3.72□□□□□ -1.81
RRM3YHR031C RRD1P40454 393 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms