RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeastyeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSC84YHR016C TAF8Q03750 510 aa15.06■□□□□ 0
YSC84YHR016C VPS27P40343 622 aaKnown RBP15.04■□□□□ -0
YSC84YHR016C MRX12P47084 519 aa15.04■□□□□ -0
YSC84YHR016C CDC45Q08032 650 aa15.04■□□□□ -0
YSC84YHR016C SNF2P22082 1703 aa15.03■□□□□ -0
YSC84YHR016C FKH1P40466 484 aa15.03■□□□□ -0
YSC84YHR016C IOC4Q04213 475 aa15.02■□□□□ -0
YSC84YHR016C CAB1Q04430 367 aa15.02■□□□□ -0
YSC84YHR016C CHZ1P40019 153 aaPredicted RBP15□□□□□ -0.01
YSC84YHR016C RIA1P53893 1110 aa15□□□□□ -0.01
YSC84YHR016C FUN12P39730 1002 aaKnown RBP15□□□□□ -0.01
YSC84YHR016C YMR196WQ04336 1088 aa14.99□□□□□ -0.01
YSC84YHR016C RVB2Q12464 471 aaKnown RBP14.98□□□□□ -0.01
YSC84YHR016C YEF3P16521 1044 aaKnown RBP14.96□□□□□ -0.01
YSC84YHR016C TRK1P12685 1235 aa14.95□□□□□ -0.02
YSC84YHR016C YDL144CQ07589 356 aa14.94□□□□□ -0.02
YSC84YHR016C YML133CQ03099 1374 aa14.93□□□□□ -0.02
YSC84YHR016C YLL067CQ07888 1374 aa14.93□□□□□ -0.02
YSC84YHR016C YLL066CQ99208 1374 aa14.93□□□□□ -0.02
YSC84YHR016C THI12P42883 340 aa14.92□□□□□ -0.02
YSC84YHR016C THI5P43534 340 aa14.92□□□□□ -0.02
YSC84YHR016C THI11P47183 340 aa14.92□□□□□ -0.02
YSC84YHR016C THI13Q07748 340 aa14.92□□□□□ -0.02
YSC84YHR016C NAP1P25293 417 aaKnown RBP14.91□□□□□ -0.02
YSC84YHR016C YNR029CP53729 429 aaKnown RBP14.9□□□□□ -0.02
YSC84YHR016C YRB30P53107 440 aaPredicted RBP14.88□□□□□ -0.03
YSC84YHR016C SUI2P20459 304 aaKnown RBP14.85□□□□□ -0.03
YSC84YHR016C RPC31P17890 251 aa14.83□□□□□ -0.03
YSC84YHR016C MPP10P47083 593 aaKnown RBP14.82□□□□□ -0.04
YSC84YHR016C FPR3P38911 411 aaKnown RBP14.8□□□□□ -0.04
YSC84YHR016C RRP46P53256 223 aaPredicted RBP14.78□□□□□ -0.04
YSC84YHR016C PSK1P31374 1356 aa14.78□□□□□ -0.04
YSC84YHR016C NAB6Q03735 1134 aaKnown RBP RIP-Chip data14.76□□□□□ -0.05not detected
YSC84YHR016C RCM1P53972 490 aa14.75□□□□□ -0.05
YSC84YHR016C RTR1P40084 226 aaPredicted RBP14.73□□□□□ -0.05
YSC84YHR016C IME2P32581 645 aa14.71□□□□□ -0.05
YSC84YHR016C CPS1P27614 576 aa14.7□□□□□ -0.06
YSC84YHR016C OPY1P38271 328 aa14.7□□□□□ -0.06
YSC84YHR016C TAP42Q04372 366 aa14.7□□□□□ -0.06
YSC84YHR016C KAR2P16474 682 aaKnown RBP14.69□□□□□ -0.06
YSC84YHR016C PPH3P32345 308 aa14.69□□□□□ -0.06
YSC84YHR016C SAP155P43612 1002 aa14.69□□□□□ -0.06
YSC84YHR016C AUS1Q08409 1394 aa14.64□□□□□ -0.07
YSC84YHR016C PDI1P17967 522 aaKnown RBP14.64□□□□□ -0.07
YSC84YHR016C PRD1P25375 712 aa14.64□□□□□ -0.07
YSC84YHR016C THI22Q06490 572 aa14.64□□□□□ -0.07
YSC84YHR016C RAD2P07276 1031 aa14.62□□□□□ -0.07
YSC84YHR016C TPD3P31383 635 aa14.62□□□□□ -0.07
YSC84YHR016C HIM1Q06674 414 aa14.62□□□□□ -0.07
YSC84YHR016C HEF3P53978 1044 aaKnown RBP14.61□□□□□ -0.07
YSC84YHR016C LEU2P04173 364 aaPredicted RBP14.59□□□□□ -0.07
YSC84YHR016C PTP3P40048 928 aa14.59□□□□□ -0.07
YSC84YHR016C YIL092WP40497 633 aa14.59□□□□□ -0.07
YSC84YHR016C YIR014WP40570 242 aa14.59□□□□□ -0.07
YSC84YHR016C YFR016CP43597 1233 aaKnown RBP14.59□□□□□ -0.07
YSC84YHR016C TY4B-HP0C2J7 1802 aa14.59□□□□□ -0.07
YSC84YHR016C TY4B-JP47024 1803 aa14.59□□□□□ -0.07
YSC84YHR016C SIR4P11978 1358 aa14.58□□□□□ -0.08
YSC84YHR016C GRX4P32642 244 aa14.58□□□□□ -0.08
YSC84YHR016C PAP2P53632 584 aaKnown RBP14.58□□□□□ -0.08
YSC84YHR016C BUD27P43573 796 aaKnown RBP RIP-Chip data14.57□□□□□ -0.08not detected
YSC84YHR016C APC1P53886 1748 aa14.56□□□□□ -0.08
YSC84YHR016C MTR4P47047 1073 aaKnown RBP14.56□□□□□ -0.08
YSC84YHR016C ADE6P38972 1358 aaKnown RBP14.55□□□□□ -0.08
YSC84YHR016C DAL5P15365 543 aa14.55□□□□□ -0.08
YSC84YHR016C RTF1P53064 558 aa14.55□□□□□ -0.08
YSC84YHR016C RTT109Q07794 436 aa14.54□□□□□ -0.08
YSC84YHR016C POL32P47110 350 aa14.52□□□□□ -0.08
YSC84YHR016C YRF1-4O13559 1382 aa14.51□□□□□ -0.09
YSC84YHR016C CSE4P36012 229 aa14.5□□□□□ -0.09
YSC84YHR016C RRP5Q05022 1729 aaKnown RBP14.5□□□□□ -0.09
YSC84YHR016C RPO41P13433 1351 aaKnown RBP14.5□□□□□ -0.09
YSC84YHR016C CLC1P17891 233 aa14.49□□□□□ -0.09
YSC84YHR016C EAF7P53911 425 aaKnown RBP14.49□□□□□ -0.09
YSC84YHR016C PRP43P53131 767 aaKnown RBP14.47□□□□□ -0.09
YSC84YHR016C MAK21Q12176 1025 aaKnown RBP14.47□□□□□ -0.09
YSC84YHR016C YIL177CP40434 1758 aa14.47□□□□□ -0.09
YSC84YHR016C YJL225CP40889 1758 aa14.47□□□□□ -0.09
YSC84YHR016C YPR148CQ06523 435 aa14.43□□□□□ -0.1
YSC84YHR016C YAH1Q12184 172 aaKnown RBP14.43□□□□□ -0.1
YSC84YHR016C RPS24AP0CX31 135 aaKnown RBP14.42□□□□□ -0.1
YSC84YHR016C RPS24BP0CX32 135 aaKnown RBP14.42□□□□□ -0.1
YSC84YHR016C YRF1-2P40105 1681 aa14.42□□□□□ -0.1
YSC84YHR016C GAS4Q08271 471 aa14.41□□□□□ -0.1
YSC84YHR016C PRP45P28004 379 aaPredicted RBP14.41□□□□□ -0.1
YSC84YHR016C PUF6Q04373 656 aaKnown RBP14.4□□□□□ -0.1
YSC84YHR016C PRP5P21372 849 aaPredicted RBP14.39□□□□□ -0.11
YSC84YHR016C REB1P21538 810 aa14.39□□□□□ -0.11
YSC84YHR016C SNF7P39929 240 aaKnown RBP14.38□□□□□ -0.11
YSC84YHR016C DPS1P04802 557 aaKnown RBP14.37□□□□□ -0.11
YSC84YHR016C PCT1P13259 424 aa14.37□□□□□ -0.11
YSC84YHR016C AKL1P38080 1108 aaKnown RBP14.37□□□□□ -0.11
YSC84YHR016C APP1P53933 587 aa14.37□□□□□ -0.11
YSC84YHR016C ENT1Q12518 454 aa14.36□□□□□ -0.11
YSC84YHR016C BUB1P41695 1021 aaKnown RBP RIP-Chip data14.35□□□□□ -0.11not detected
YSC84YHR016C DSD1P53095 428 aa14.34□□□□□ -0.11
YSC84YHR016C TRP5P00931 707 aaKnown RBP14.32□□□□□ -0.12
YSC84YHR016C YNL050CP53952 270 aa14.32□□□□□ -0.12
YSC84YHR016C FKS3Q04952 1785 aa14.32□□□□□ -0.12
YSC84YHR016C GYP7P48365 746 aa14.32□□□□□ -0.12
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms