RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W TFB4Q12004 338 aa9.78□□□□□ -0.84
SKI6YGR195W SEC2P17065 759 aa9.77□□□□□ -0.85
SKI6YGR195W DMA1P38823 416 aa9.76□□□□□ -0.85
SKI6YGR195W NPL4P33755 580 aa9.74□□□□□ -0.85
SKI6YGR195W FRK1Q03002 865 aaPredicted RBP9.73□□□□□ -0.85
SKI6YGR195W IFH1P39520 1085 aa9.71□□□□□ -0.86
SKI6YGR195W BRE2P43132 505 aa9.7□□□□□ -0.86
SKI6YGR195W VPS70P47161 811 aa9.7□□□□□ -0.86
SKI6YGR195W LAM6Q08001 693 aa9.7□□□□□ -0.86
SKI6YGR195W GAR1P28007 205 aaKnown RBP9.69□□□□□ -0.86
SKI6YGR195W SPT16P32558 1035 aaKnown RBP9.69□□□□□ -0.86
SKI6YGR195W YPR148CQ06523 435 aa9.69□□□□□ -0.86
SKI6YGR195W MVP1P40959 511 aaKnown RBP9.68□□□□□ -0.86
SKI6YGR195W RRN7P40992 514 aa9.68□□□□□ -0.86
SKI6YGR195W YPL062WQ02781 134 aa9.68□□□□□ -0.86
SKI6YGR195W YPR109WQ06104 294 aa9.65□□□□□ -0.86
SKI6YGR195W BDP1P46678 594 aa9.64□□□□□ -0.87
SKI6YGR195W ERF2Q06551 359 aa9.64□□□□□ -0.87
SKI6YGR195W RGR1P19263 1082 aa9.61□□□□□ -0.87
SKI6YGR195W COX6P00427 148 aa9.6□□□□□ -0.87
SKI6YGR195W KEX2P13134 814 aa9.59□□□□□ -0.87
SKI6YGR195W GBP2P25555 427 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
SKI6YGR195W GCR2Q01722 534 aa9.56□□□□□ -0.88
SKI6YGR195W TAF7Q05021 590 aa9.56□□□□□ -0.88
SKI6YGR195W CDC4P07834 779 aa9.52□□□□□ -0.89
SKI6YGR195W PAC1P39946 494 aaKnown RBP9.49□□□□□ -0.89
SKI6YGR195W MAK21Q12176 1025 aaKnown RBP9.49□□□□□ -0.89
SKI6YGR195W PAT1P25644 796 aaKnown RBP9.47□□□□□ -0.89
SKI6YGR195W MET22P32179 357 aa9.47□□□□□ -0.89
SKI6YGR195W PUS5Q06244 254 aa9.45□□□□□ -0.9
SKI6YGR195W HED1Q03937 162 aa9.43□□□□□ -0.9
SKI6YGR195W MET32Q12041 191 aa9.42□□□□□ -0.9
SKI6YGR195W ASH1P34233 588 aa9.38□□□□□ -0.91
SKI6YGR195W AGE1Q04412 482 aa9.38□□□□□ -0.91
SKI6YGR195W SAS10Q12136 610 aaPredicted RBP9.38□□□□□ -0.91
SKI6YGR195W TUB4P53378 473 aa9.37□□□□□ -0.91
SKI6YGR195W MOD5P07884 428 aa9.36□□□□□ -0.91
SKI6YGR195W ENV9Q08651 330 aa9.36□□□□□ -0.91
SKI6YGR195W PBS2P08018 668 aa9.35□□□□□ -0.91
SKI6YGR195W YDR444WQ04093 687 aa9.34□□□□□ -0.91
SKI6YGR195W PSE1P32337 1089 aaKnown RBP9.29□□□□□ -0.92
SKI6YGR195W HST3P53687 447 aa9.27□□□□□ -0.93
SKI6YGR195W AFT1P22149 690 aa9.26□□□□□ -0.93
SKI6YGR195W YDL176WQ12027 708 aa9.26□□□□□ -0.93
SKI6YGR195W LCB5Q06147 687 aaKnown RBP9.24□□□□□ -0.93
SKI6YGR195W YJR115WP47152 169 aa9.23□□□□□ -0.93
SKI6YGR195W YNL115CP53925 644 aa9.22□□□□□ -0.93
SKI6YGR195W IES2P40154 320 aa9.21□□□□□ -0.94
SKI6YGR195W RRD1P40454 393 aaKnown RBP9.21□□□□□ -0.94
SKI6YGR195W CKB1P43639 278 aa9.21□□□□□ -0.94
SKI6YGR195W MAM3Q12296 706 aa9.21□□□□□ -0.94
SKI6YGR195W NIS1P53939 407 aa9.18□□□□□ -0.94
SKI6YGR195W CLB5P30283 435 aa9.17□□□□□ -0.94
SKI6YGR195W RTF1P53064 558 aa9.16□□□□□ -0.94
SKI6YGR195W SIT4P20604 311 aa9.14□□□□□ -0.95
SKI6YGR195W TEA1P47988 759 aa9.13□□□□□ -0.95
SKI6YGR195W KXD1P53158 218 aa9.12□□□□□ -0.95
SKI6YGR195W PDC1P06169 563 aaKnown RBP9.11□□□□□ -0.95
SKI6YGR195W HXT10P43581 546 aa9.11□□□□□ -0.95
SKI6YGR195W NUP42P49686 430 aaKnown RBP9.11□□□□□ -0.95
SKI6YGR195W DIT2P21595 489 aa9.08□□□□□ -0.96
SKI6YGR195W SLY41P22215 453 aa9.08□□□□□ -0.96
SKI6YGR195W CAF120P53836 1060 aa9.08□□□□□ -0.96
SKI6YGR195W DSF2P38213 736 aa9.07□□□□□ -0.96
SKI6YGR195W SYH1Q02875 849 aaKnown RBP9.06□□□□□ -0.96
SKI6YGR195W SCJ1P25303 377 aa9.05□□□□□ -0.96
SKI6YGR195W FPK1P53739 893 aa9.05□□□□□ -0.96
SKI6YGR195W SPB4P25808 606 aaPredicted RBP9.04□□□□□ -0.96
SKI6YGR195W TPD3P31383 635 aa9.03□□□□□ -0.96
SKI6YGR195W UGA3P26370 528 aa9.02□□□□□ -0.97
SKI6YGR195W MSB3P48566 633 aaPredicted RBP9.02□□□□□ -0.97
SKI6YGR195W PTK2P47116 818 aaKnown RBP9.01□□□□□ -0.97
SKI6YGR195W OPT2Q06593 877 aa9.01□□□□□ -0.97
SKI6YGR195W YDL206WQ12424 762 aa9.01□□□□□ -0.97
SKI6YGR195W KIP2P28743 706 aa9□□□□□ -0.97
SKI6YGR195W YMR196WQ04336 1088 aa9□□□□□ -0.97
SKI6YGR195W IXR1P33417 597 aa8.96□□□□□ -0.98
SKI6YGR195W SRF1Q12516 437 aa8.96□□□□□ -0.98
SKI6YGR195W TBF1Q02457 562 aa8.95□□□□□ -0.98
SKI6YGR195W TRM1P15565 570 aaKnown RBP8.94□□□□□ -0.98
SKI6YGR195W ALR1Q08269 859 aa8.94□□□□□ -0.98
SKI6YGR195W RPA14P50106 137 aa8.93□□□□□ -0.98
SKI6YGR195W ACO2P39533 789 aa8.92□□□□□ -0.98
SKI6YGR195W PUS6P53294 404 aa8.92□□□□□ -0.98
SKI6YGR195W ITT1Q04638 464 aa8.92□□□□□ -0.98
SKI6YGR195W LEU3P08638 886 aa8.91□□□□□ -0.98
SKI6YGR195W YPR097WQ06839 1073 aa8.91□□□□□ -0.98
SKI6YGR195W YIR007WP40566 764 aa8.88□□□□□ -0.99
SKI6YGR195W TYW1Q08960 810 aaKnown RBP8.88□□□□□ -0.99
SKI6YGR195W MRT4P33201 236 aaKnown RBP8.86□□□□□ -0.99
SKI6YGR195W ESS1P22696 170 aa8.85□□□□□ -0.99
SKI6YGR195W YLR346CQ06139 101 aa8.85□□□□□ -0.99
SKI6YGR195W LEO1P38439 464 aa8.84□□□□□ -0.99
SKI6YGR195W MMP1Q12372 583 aa8.83□□□□□ -1
SKI6YGR195W NUP85P46673 744 aa8.82□□□□□ -1
SKI6YGR195W YGR035CP53222 116 aa8.82□□□□□ -1
SKI6YGR195W HST2P53686 357 aa8.82□□□□□ -1
SKI6YGR195W YJU3P28321 313 aa8.81□□□□□ -1
SKI6YGR195W HPF1Q05164 967 aa8.81□□□□□ -1
SKI6YGR195W TY1A-BLQ12266 440 aa8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms