RNA–Protein interactions for RNA: YGR129W

SYF2, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene SYF2, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYF2YGR129W TIF11P38912 153 aaKnown RBP9.48□□□□□ -0.89
SYF2YGR129W TY3B-GQ99315 1547 aa9.45□□□□□ -0.9
SYF2YGR129W USO1P25386 1790 aa9.44□□□□□ -0.9
SYF2YGR129W RTG3P38165 486 aa9.43□□□□□ -0.9
SYF2YGR129W YMR1P47147 688 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
SYF2YGR129W BNR1P40450 1375 aa9.42□□□□□ -0.9
SYF2YGR129W VPS29P38759 282 aa9.41□□□□□ -0.9
SYF2YGR129W DBP1P24784 617 aaKnown RBP9.39□□□□□ -0.91
SYF2YGR129W YSP2Q06681 1438 aa9.39□□□□□ -0.91
SYF2YGR129W ULI1P43604 169 aa9.36□□□□□ -0.91
SYF2YGR129W FKH1P40466 484 aa9.35□□□□□ -0.91
SYF2YGR129W RCR1P38212 213 aa9.34□□□□□ -0.91
SYF2YGR129W STS1P38637 319 aa9.34□□□□□ -0.91
SYF2YGR129W URN1Q06525 465 aaKnown RBP9.34□□□□□ -0.91
SYF2YGR129W MSB4Q12317 492 aa9.34□□□□□ -0.91
SYF2YGR129W LDB19Q12502 818 aa9.34□□□□□ -0.91
SYF2YGR129W AIR2Q12476 344 aaKnown RBP9.33□□□□□ -0.92
SYF2YGR129W YOL036WQ08206 761 aa9.32□□□□□ -0.92
SYF2YGR129W SAS10Q12136 610 aaPredicted RBP9.32□□□□□ -0.92
SYF2YGR129W IFH1P39520 1085 aa9.31□□□□□ -0.92
SYF2YGR129W THI12P42883 340 aa9.31□□□□□ -0.92
SYF2YGR129W SET4P42948 560 aa9.31□□□□□ -0.92
SYF2YGR129W THI5P43534 340 aa9.31□□□□□ -0.92
SYF2YGR129W THI11P47183 340 aa9.31□□□□□ -0.92
SYF2YGR129W YMR196WQ04336 1088 aa9.31□□□□□ -0.92
SYF2YGR129W THI13Q07748 340 aa9.31□□□□□ -0.92
SYF2YGR129W CAT8P39113 1433 aa9.31□□□□□ -0.92
SYF2YGR129W IOC2Q12072 812 aa9.3□□□□□ -0.92
SYF2YGR129W VMA1P17255 1071 aaKnown RBP9.29□□□□□ -0.92
SYF2YGR129W CKB1P43639 278 aa9.29□□□□□ -0.92
SYF2YGR129W YJL171CP46992 396 aa9.29□□□□□ -0.92
SYF2YGR129W EAP1P36041 632 aaKnown RBP9.28□□□□□ -0.92
SYF2YGR129W TAF7Q05021 590 aa9.28□□□□□ -0.92
SYF2YGR129W GLN1P32288 370 aaKnown RBP9.26□□□□□ -0.93
SYF2YGR129W YBT1P32386 1661 aa9.24□□□□□ -0.93
SYF2YGR129W TY1B-NL2Q99337 1749 aaKnown RBP9.23□□□□□ -0.93
SYF2YGR129W TRP5P00931 707 aaKnown RBP9.21□□□□□ -0.94
SYF2YGR129W SAM3Q08986 587 aa9.21□□□□□ -0.94
SYF2YGR129W IPL1P38991 367 aa9.2□□□□□ -0.94
SYF2YGR129W GEA1P47102 1408 aaPredicted RBP9.19□□□□□ -0.94
SYF2YGR129W IML1P47170 1584 aa9.17□□□□□ -0.94
SYF2YGR129W HAP1P0CE41 1502 aa9.17□□□□□ -0.94
SYF2YGR129W RTG1P32607 177 aa9.17□□□□□ -0.94
SYF2YGR129W NUP188P52593 1655 aaKnown RBP9.16□□□□□ -0.94
SYF2YGR129W BMT6Q12291 365 aa9.16□□□□□ -0.94
SYF2YGR129W TYS1P36421 394 aaKnown RBP9.12□□□□□ -0.95
SYF2YGR129W YNL035CP53962 389 aaKnown RBP9.12□□□□□ -0.95
SYF2YGR129W GYP5Q12344 894 aa9.11□□□□□ -0.95
SYF2YGR129W VMR1P38735 1592 aa9.11□□□□□ -0.95
SYF2YGR129W NCR1Q12200 1170 aa9.1□□□□□ -0.95
SYF2YGR129W APP1P53933 587 aa9.09□□□□□ -0.95
SYF2YGR129W SEC61P32915 480 aa9.07□□□□□ -0.96
SYF2YGR129W DCW1P36091 449 aa9.05□□□□□ -0.96
SYF2YGR129W HTA1P04911 132 aaKnown RBP9.04□□□□□ -0.96
SYF2YGR129W HTA2P04912 132 aa9.04□□□□□ -0.96
SYF2YGR129W RAM2P29703 316 aa9.03□□□□□ -0.96
SYF2YGR129W MAK11P20484 414 aaKnown RBP9.02□□□□□ -0.97
SYF2YGR129W SRB8P25648 1427 aa9.02□□□□□ -0.97
SYF2YGR129W TFG1P41895 735 aaPredicted RBP9.01□□□□□ -0.97
SYF2YGR129W JIP4Q03361 876 aa9.01□□□□□ -0.97
SYF2YGR129W DAN4P47179 1161 aa8.99□□□□□ -0.97
SYF2YGR129W BUD21Q08492 214 aaPredicted RBP8.99□□□□□ -0.97
SYF2YGR129W YMR074CQ04773 145 aa8.98□□□□□ -0.97
SYF2YGR129W YEL023CP39992 682 aa8.97□□□□□ -0.97
SYF2YGR129W GRE2Q12068 342 aaKnown RBP8.97□□□□□ -0.97
SYF2YGR129W SAP30P38429 201 aa8.94□□□□□ -0.98
SYF2YGR129W PDR5P33302 1511 aaKnown RBP8.94□□□□□ -0.98
SYF2YGR129W EDS1P38073 919 aa8.93□□□□□ -0.98
SYF2YGR129W PTC4P38089 393 aa8.93□□□□□ -0.98
SYF2YGR129W BCK1Q01389 1478 aa8.92□□□□□ -0.98
SYF2YGR129W PDR11P40550 1411 aa8.91□□□□□ -0.98
SYF2YGR129W PTC3P34221 468 aaKnown RBP8.91□□□□□ -0.98
SYF2YGR129W ATH1P48016 1211 aa8.91□□□□□ -0.98
SYF2YGR129W YDL129WQ07555 291 aa8.91□□□□□ -0.98
SYF2YGR129W COQ8P27697 501 aa8.89□□□□□ -0.99
SYF2YGR129W ENT1Q12518 454 aa8.88□□□□□ -0.99
SYF2YGR129W GUT1P32190 709 aa8.87□□□□□ -0.99
SYF2YGR129W KRE5P22023 1365 aa8.86□□□□□ -0.99
SYF2YGR129W CFT1Q06632 1357 aaKnown RBP8.86□□□□□ -0.99
SYF2YGR129W RIA1P53893 1110 aa8.86□□□□□ -0.99
SYF2YGR129W YNR029CP53729 429 aaKnown RBP8.85□□□□□ -0.99
SYF2YGR129W ENV9Q08651 330 aa8.85□□□□□ -0.99
SYF2YGR129W MRX12P47084 519 aa8.83□□□□□ -1
SYF2YGR129W IMH1Q06704 911 aaKnown RBP8.8□□□□□ -1
SYF2YGR129W PML39Q03760 334 aa8.79□□□□□ -1
SYF2YGR129W CHL1P22516 861 aaPredicted RBP8.78□□□□□ -1
SYF2YGR129W PRE3P38624 215 aa8.77□□□□□ -1.01
SYF2YGR129W NST1P53935 1240 aa8.74□□□□□ -1.01
SYF2YGR129W SOL3P38858 249 aa8.73□□□□□ -1.01
SYF2YGR129W BCK2P33306 851 aa8.72□□□□□ -1.01
SYF2YGR129W GCN2P15442 1659 aa8.72□□□□□ -1.01
SYF2YGR129W SSA1P10591 642 aaKnown RBP8.7□□□□□ -1.02
SYF2YGR129W YDR344CQ05510 147 aa8.7□□□□□ -1.02
SYF2YGR129W NOP53Q12080 455 aaKnown RBP8.7□□□□□ -1.02
SYF2YGR129W YRF1-2P40105 1681 aa8.69□□□□□ -1.02
SYF2YGR129W AI4P03878 556 aa8.69□□□□□ -1.02
SYF2YGR129W MPH3P0CE00 602 aa8.68□□□□□ -1.02
SYF2YGR129W MID1P41821 548 aa8.68□□□□□ -1.02
SYF2YGR129W ELP4Q02884 456 aaKnown RBP8.68□□□□□ -1.02
SYF2YGR129W TY3B-IQ7LHG5 1498 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms