RNA–Protein interactions for RNA: YGL225W

VRG4, Transcript of Golgi GDP-mannose transporter, yeastyeast

Gene VRG4, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VRG4YGL225W APP1P53933 587 aa12.49□□□□□ -0.41
VRG4YGL225W CHZ1P40019 153 aaPredicted RBP12.47□□□□□ -0.41
VRG4YGL225W ORC1P54784 914 aaPredicted RBP12.47□□□□□ -0.41
VRG4YGL225W ADE6P38972 1358 aaKnown RBP12.46□□□□□ -0.41
VRG4YGL225W REB1P21538 810 aa12.46□□□□□ -0.41
VRG4YGL225W ENT1Q12518 454 aa12.44□□□□□ -0.42
VRG4YGL225W RRP5Q05022 1729 aaKnown RBP12.42□□□□□ -0.42
VRG4YGL225W PRP45P28004 379 aaPredicted RBP12.41□□□□□ -0.42
VRG4YGL225W YIL055CP40523 627 aaKnown RBP12.41□□□□□ -0.42
VRG4YGL225W LEU2P04173 364 aaPredicted RBP12.4□□□□□ -0.42
VRG4YGL225W ENV9Q08651 330 aa12.4□□□□□ -0.42
VRG4YGL225W MTR4P47047 1073 aaKnown RBP12.39□□□□□ -0.43
VRG4YGL225W PRP43P53131 767 aaKnown RBP12.39□□□□□ -0.43
VRG4YGL225W PRP5P21372 849 aaPredicted RBP12.38□□□□□ -0.43
VRG4YGL225W POL5P39985 1022 aaKnown RBP12.38□□□□□ -0.43
VRG4YGL225W TY4B-HP0C2J7 1802 aa12.38□□□□□ -0.43
VRG4YGL225W TY4B-JP47024 1803 aa12.38□□□□□ -0.43
VRG4YGL225W YML133CQ03099 1374 aa12.35□□□□□ -0.43
VRG4YGL225W YLL067CQ07888 1374 aa12.35□□□□□ -0.43
VRG4YGL225W YLL066CQ99208 1374 aa12.35□□□□□ -0.43
VRG4YGL225W FKH1P40466 484 aa12.34□□□□□ -0.43
VRG4YGL225W GLN1P32288 370 aaKnown RBP12.32□□□□□ -0.44
VRG4YGL225W IMH1Q06704 911 aaKnown RBP12.32□□□□□ -0.44
VRG4YGL225W CSE4P36012 229 aa12.31□□□□□ -0.44
VRG4YGL225W MHP1P43638 1398 aa12.3□□□□□ -0.44
VRG4YGL225W YRF1-2P40105 1681 aa12.3□□□□□ -0.44
VRG4YGL225W RPS24AP0CX31 135 aaKnown RBP12.29□□□□□ -0.44
VRG4YGL225W RPS24BP0CX32 135 aaKnown RBP12.29□□□□□ -0.44
VRG4YGL225W MSB3P48566 633 aaPredicted RBP12.29□□□□□ -0.44
VRG4YGL225W MLP1Q02455 1875 aaKnown RBP12.27□□□□□ -0.44
VRG4YGL225W SLM3Q12093 417 aa12.26□□□□□ -0.45
VRG4YGL225W RTG3P38165 486 aa12.25□□□□□ -0.45
VRG4YGL225W TCB1Q12466 1186 aa12.25□□□□□ -0.45
VRG4YGL225W PDS5Q04264 1277 aa12.24□□□□□ -0.45
VRG4YGL225W YMR074CQ04773 145 aa12.24□□□□□ -0.45
VRG4YGL225W PDI1P17967 522 aaKnown RBP12.22□□□□□ -0.45
VRG4YGL225W RSF2P46974 1380 aa12.21□□□□□ -0.45
VRG4YGL225W RTF1P53064 558 aa12.2□□□□□ -0.46
VRG4YGL225W TAP42Q04372 366 aa12.2□□□□□ -0.46
VRG4YGL225W IES2P40154 320 aa12.19□□□□□ -0.46
VRG4YGL225W GRX4P32642 244 aa12.16□□□□□ -0.46
VRG4YGL225W URB1P34241 1764 aaKnown RBP12.15□□□□□ -0.46
VRG4YGL225W DPS1P04802 557 aaKnown RBP12.14□□□□□ -0.47
VRG4YGL225W LEU3P08638 886 aa12.14□□□□□ -0.47
VRG4YGL225W GAS4Q08271 471 aa12.14□□□□□ -0.47
VRG4YGL225W YIL177CP40434 1758 aa12.14□□□□□ -0.47
VRG4YGL225W YJL225CP40889 1758 aa12.14□□□□□ -0.47
VRG4YGL225W ROM2P51862 1356 aaKnown RBP12.14□□□□□ -0.47
VRG4YGL225W XKS1P42826 600 aa12.13□□□□□ -0.47
VRG4YGL225W AUS1Q08409 1394 aa12.13□□□□□ -0.47
VRG4YGL225W DOT5P40553 215 aa12.12□□□□□ -0.47
VRG4YGL225W YRF1-3P0CX14 1859 aa12.11□□□□□ -0.47
VRG4YGL225W YRF1-7P0CX15 1859 aa12.11□□□□□ -0.47
VRG4YGL225W YRF1-6P53819 1859 aa12.11□□□□□ -0.47
VRG4YGL225W YEF3P16521 1044 aaKnown RBP12.11□□□□□ -0.47
VRG4YGL225W ENP1P38333 483 aaKnown RBP12.11□□□□□ -0.47
VRG4YGL225W SEC3P33332 1336 aaKnown RBP12.11□□□□□ -0.47
VRG4YGL225W APC1P53886 1748 aa12.09□□□□□ -0.47
VRG4YGL225W HIM1Q06674 414 aa12.09□□□□□ -0.47
VRG4YGL225W FKS3Q04952 1785 aa12.08□□□□□ -0.48
VRG4YGL225W EDE1P34216 1381 aa12.07□□□□□ -0.48
VRG4YGL225W BUD31P25337 157 aaPredicted RBP12.07□□□□□ -0.48
VRG4YGL225W YKL133CP36066 463 aa12.07□□□□□ -0.48
VRG4YGL225W PRI1P10363 409 aa12.06□□□□□ -0.48
VRG4YGL225W FOX2Q02207 900 aaKnown RBP12.06□□□□□ -0.48
VRG4YGL225W SIR4P11978 1358 aa12.05□□□□□ -0.48
VRG4YGL225W KAR2P16474 682 aaKnown RBP12.04□□□□□ -0.48
VRG4YGL225W RPN11P43588 306 aaKnown RBP12.04□□□□□ -0.48
VRG4YGL225W UBP1P25037 809 aa12.03□□□□□ -0.48
VRG4YGL225W RCR1P38212 213 aa12.03□□□□□ -0.48
VRG4YGL225W MEC3Q02574 474 aa12.02□□□□□ -0.49
VRG4YGL225W RPO41P13433 1351 aaKnown RBP12.02□□□□□ -0.49
VRG4YGL225W NST1P53935 1240 aa12.01□□□□□ -0.49
VRG4YGL225W TRK1P12685 1235 aa11.99□□□□□ -0.49
VRG4YGL225W PSD2P53037 1138 aaKnown RBP11.99□□□□□ -0.49
VRG4YGL225W LAM6Q08001 693 aa11.99□□□□□ -0.49
VRG4YGL225W COBP00163 385 aa11.98□□□□□ -0.49
VRG4YGL225W YKR075CP36155 307 aa11.97□□□□□ -0.49
VRG4YGL225W NPR2P39923 615 aa11.97□□□□□ -0.49
VRG4YGL225W YJL181WP46987 611 aa11.97□□□□□ -0.49
VRG4YGL225W SNF2P22082 1703 aa11.97□□□□□ -0.49
VRG4YGL225W PRP40P33203 583 aaKnown RBP11.96□□□□□ -0.49
VRG4YGL225W ADE16P54113 591 aaKnown RBP11.96□□□□□ -0.49
VRG4YGL225W YRF1-4O13559 1382 aa11.95□□□□□ -0.5
VRG4YGL225W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.94□□□□□ -0.5not detected
VRG4YGL225W DSD1P53095 428 aa11.94□□□□□ -0.5
VRG4YGL225W FRK1Q03002 865 aaPredicted RBP11.94□□□□□ -0.5
VRG4YGL225W IOC4Q04213 475 aa11.94□□□□□ -0.5
VRG4YGL225W GTT3P39996 337 aa11.93□□□□□ -0.5
VRG4YGL225W PAP2P53632 584 aaKnown RBP11.93□□□□□ -0.5
VRG4YGL225W CTF4Q01454 927 aa11.93□□□□□ -0.5
VRG4YGL225W INP54Q08227 384 aaKnown RBP11.91□□□□□ -0.5
VRG4YGL225W AKL1P38080 1108 aaKnown RBP11.9□□□□□ -0.5
VRG4YGL225W SPT7P35177 1332 aa11.89□□□□□ -0.51
VRG4YGL225W LYS4P49367 693 aaPredicted RBP11.89□□□□□ -0.51
VRG4YGL225W ATG13Q06628 738 aa11.89□□□□□ -0.51
VRG4YGL225W OSM1P21375 501 aaKnown RBP11.88□□□□□ -0.51
VRG4YGL225W HSP104P31539 908 aaKnown RBP11.88□□□□□ -0.51
VRG4YGL225W YBL086CP38177 466 aa11.87□□□□□ -0.51
VRG4YGL225W RRP46P53256 223 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms