RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeastyeast

Gene CUP2, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP2YGL166W CPS1P27614 576 aa8.89□□□□□ -0.99
CUP2YGL166W PRP45P28004 379 aaPredicted RBP8.87□□□□□ -0.99
CUP2YGL166W PPH3P32345 308 aa8.87□□□□□ -0.99
CUP2YGL166W KIP3P53086 805 aaKnown RBP8.86□□□□□ -0.99
CUP2YGL166W ORC1P54784 914 aaPredicted RBP8.86□□□□□ -0.99
CUP2YGL166W SPE2P21182 396 aa8.85□□□□□ -0.99
CUP2YGL166W IMH1Q06704 911 aaKnown RBP8.84□□□□□ -0.99
CUP2YGL166W YMR074CQ04773 145 aa8.82□□□□□ -1
CUP2YGL166W PRP5P21372 849 aaPredicted RBP8.81□□□□□ -1
CUP2YGL166W RRP5Q05022 1729 aaKnown RBP8.8□□□□□ -1
CUP2YGL166W CHZ1P40019 153 aaPredicted RBP8.78□□□□□ -1
CUP2YGL166W PSK1P31374 1356 aa8.77□□□□□ -1.01
CUP2YGL166W LEU3P08638 886 aa8.77□□□□□ -1.01
CUP2YGL166W PRI1P10363 409 aa8.76□□□□□ -1.01
CUP2YGL166W MSB3P48566 633 aaPredicted RBP8.76□□□□□ -1.01
CUP2YGL166W ADE6P38972 1358 aaKnown RBP8.74□□□□□ -1.01
CUP2YGL166W CSE4P36012 229 aa8.74□□□□□ -1.01
CUP2YGL166W TY4B-HP0C2J7 1802 aa8.73□□□□□ -1.01
CUP2YGL166W TY4B-JP47024 1803 aa8.73□□□□□ -1.01
CUP2YGL166W LEU2P04173 364 aaPredicted RBP8.73□□□□□ -1.01
CUP2YGL166W YRF1-2P40105 1681 aa8.72□□□□□ -1.01
CUP2YGL166W RPS24AP0CX31 135 aaKnown RBP8.72□□□□□ -1.01
CUP2YGL166W RPS24BP0CX32 135 aaKnown RBP8.72□□□□□ -1.01
CUP2YGL166W BUD31P25337 157 aaPredicted RBP8.72□□□□□ -1.01
CUP2YGL166W YLR419WQ06698 1435 aaKnown RBP8.71□□□□□ -1.01
CUP2YGL166W IES2P40154 320 aa8.71□□□□□ -1.02
CUP2YGL166W MTR4P47047 1073 aaKnown RBP8.7□□□□□ -1.02
CUP2YGL166W TCB1Q12466 1186 aa8.7□□□□□ -1.02
CUP2YGL166W RPN11P43588 306 aaKnown RBP8.68□□□□□ -1.02
CUP2YGL166W SLM3Q12093 417 aa8.68□□□□□ -1.02
CUP2YGL166W DOT5P40553 215 aa8.67□□□□□ -1.02
CUP2YGL166W PRP43P53131 767 aaKnown RBP8.67□□□□□ -1.02
CUP2YGL166W UBP1P25037 809 aa8.66□□□□□ -1.02
CUP2YGL166W RSF2P46974 1380 aa8.65□□□□□ -1.02
CUP2YGL166W SCT1P32784 759 aa8.65□□□□□ -1.02
CUP2YGL166W ENP1P38333 483 aaKnown RBP8.65□□□□□ -1.02
CUP2YGL166W YML133CQ03099 1374 aa8.63□□□□□ -1.03
CUP2YGL166W YLL067CQ07888 1374 aa8.63□□□□□ -1.03
CUP2YGL166W YLL066CQ99208 1374 aa8.63□□□□□ -1.03
CUP2YGL166W XKS1P42826 600 aa8.63□□□□□ -1.03
CUP2YGL166W FOX2Q02207 900 aaKnown RBP8.63□□□□□ -1.03
CUP2YGL166W URB1P34241 1764 aaKnown RBP8.63□□□□□ -1.03
CUP2YGL166W GAS4Q08271 471 aa8.62□□□□□ -1.03
CUP2YGL166W DPS1P04802 557 aaKnown RBP8.61□□□□□ -1.03
CUP2YGL166W YKL133CP36066 463 aa8.61□□□□□ -1.03
CUP2YGL166W YJL181WP46987 611 aa8.61□□□□□ -1.03
CUP2YGL166W ROM2P51862 1356 aaKnown RBP8.61□□□□□ -1.03
CUP2YGL166W RTG3P38165 486 aa8.6□□□□□ -1.03
CUP2YGL166W FKH1P40466 484 aa8.6□□□□□ -1.03
CUP2YGL166W COBP00163 385 aa8.58□□□□□ -1.04
CUP2YGL166W YEF3P16521 1044 aaKnown RBP8.58□□□□□ -1.04
CUP2YGL166W LYS4P49367 693 aaPredicted RBP8.58□□□□□ -1.04
CUP2YGL166W RTF1P53064 558 aa8.58□□□□□ -1.04
CUP2YGL166W LAM6Q08001 693 aa8.58□□□□□ -1.04
CUP2YGL166W YBL086CP38177 466 aa8.57□□□□□ -1.04
CUP2YGL166W NPR2P39923 615 aa8.57□□□□□ -1.04
CUP2YGL166W FKS3Q04952 1785 aa8.56□□□□□ -1.04
CUP2YGL166W PDI1P17967 522 aaKnown RBP8.56□□□□□ -1.04
CUP2YGL166W PRP40P33203 583 aaKnown RBP8.56□□□□□ -1.04
CUP2YGL166W YRF1-4O13559 1382 aa8.55□□□□□ -1.04
CUP2YGL166W YRF1-3P0CX14 1859 aa8.55□□□□□ -1.04
CUP2YGL166W YRF1-7P0CX15 1859 aa8.55□□□□□ -1.04
CUP2YGL166W YRF1-6P53819 1859 aa8.55□□□□□ -1.04
CUP2YGL166W YIL177CP40434 1758 aa8.54□□□□□ -1.04
CUP2YGL166W YJL225CP40889 1758 aa8.54□□□□□ -1.04
CUP2YGL166W POL5P39985 1022 aaKnown RBP8.54□□□□□ -1.04
CUP2YGL166W PRY3P47033 881 aa8.54□□□□□ -1.04
CUP2YGL166W YKR075CP36155 307 aa8.53□□□□□ -1.04
CUP2YGL166W RCR1P38212 213 aa8.53□□□□□ -1.04
CUP2YGL166W UGA2P38067 497 aa8.52□□□□□ -1.05
CUP2YGL166W FRK1Q03002 865 aaPredicted RBP8.52□□□□□ -1.05
CUP2YGL166W PDS5Q04264 1277 aa8.52□□□□□ -1.05
CUP2YGL166W HIM1Q06674 414 aa8.52□□□□□ -1.05
CUP2YGL166W APC1P53886 1748 aa8.51□□□□□ -1.05
CUP2YGL166W MLP1Q02455 1875 aaKnown RBP8.51□□□□□ -1.05
CUP2YGL166W EDE1P34216 1381 aa8.51□□□□□ -1.05
CUP2YGL166W ALD2P47771 506 aa8.51□□□□□ -1.05
CUP2YGL166W MEC3Q02574 474 aa8.51□□□□□ -1.05
CUP2YGL166W SSA2P10592 639 aaKnown RBP8.5□□□□□ -1.05
CUP2YGL166W MHP1P43638 1398 aa8.49□□□□□ -1.05
CUP2YGL166W AUS1Q08409 1394 aa8.49□□□□□ -1.05
CUP2YGL166W GRX4P32642 244 aa8.49□□□□□ -1.05
CUP2YGL166W ADE16P54113 591 aaKnown RBP8.49□□□□□ -1.05
CUP2YGL166W TAP42Q04372 366 aa8.49□□□□□ -1.05
CUP2YGL166W GTT3P39996 337 aa8.48□□□□□ -1.05
CUP2YGL166W CTH1P47976 325 aa8.48□□□□□ -1.05
CUP2YGL166W SEC3P33332 1336 aaKnown RBP8.47□□□□□ -1.05
CUP2YGL166W SIR4P11978 1358 aa8.47□□□□□ -1.05
CUP2YGL166W KAR2P16474 682 aaKnown RBP8.46□□□□□ -1.06
CUP2YGL166W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
CUP2YGL166W ATG13Q06628 738 aa8.46□□□□□ -1.06
CUP2YGL166W RPO41P13433 1351 aaKnown RBP8.44□□□□□ -1.06
CUP2YGL166W PAP2P53632 584 aaKnown RBP8.43□□□□□ -1.06
CUP2YGL166W NST1P53935 1240 aa8.42□□□□□ -1.06
CUP2YGL166W INP54Q08227 384 aaKnown RBP8.42□□□□□ -1.06
CUP2YGL166W MSB4Q12317 492 aa8.42□□□□□ -1.06
CUP2YGL166W OSM1P21375 501 aaKnown RBP8.41□□□□□ -1.06
CUP2YGL166W SNF2P22082 1703 aa8.4□□□□□ -1.06
CUP2YGL166W ALD3P54114 506 aa8.4□□□□□ -1.06
CUP2YGL166W SPT7P35177 1332 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms