RNA–Protein interactions for RNA: YGL085W

LCL3, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL3, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL3YGL085W TY4B-HP0C2J7 1802 aa9.38□□□□□ -0.91
LCL3YGL085W TY4B-JP47024 1803 aa9.38□□□□□ -0.91
LCL3YGL085W TAF8Q03750 510 aa9.37□□□□□ -0.91
LCL3YGL085W TAF5P38129 798 aa9.36□□□□□ -0.91
LCL3YGL085W ENT1Q12518 454 aa9.36□□□□□ -0.91
LCL3YGL085W CPS1P27614 576 aa9.35□□□□□ -0.91
LCL3YGL085W RCM1P53972 490 aa9.33□□□□□ -0.92
LCL3YGL085W ENV9Q08651 330 aa9.33□□□□□ -0.92
LCL3YGL085W PPH3P32345 308 aa9.3□□□□□ -0.92
LCL3YGL085W IMH1Q06704 911 aaKnown RBP9.29□□□□□ -0.92
LCL3YGL085W PRP45P28004 379 aaPredicted RBP9.28□□□□□ -0.92
LCL3YGL085W YMR074CQ04773 145 aa9.28□□□□□ -0.92
LCL3YGL085W PSK1P31374 1356 aa9.27□□□□□ -0.93
LCL3YGL085W ADE6P38972 1358 aaKnown RBP9.26□□□□□ -0.93
LCL3YGL085W AAD16Q02895 342 aa9.26□□□□□ -0.93
LCL3YGL085W SPE2P21182 396 aa9.25□□□□□ -0.93
LCL3YGL085W URB1P34241 1764 aaKnown RBP9.23□□□□□ -0.93
LCL3YGL085W KIP3P53086 805 aaKnown RBP9.23□□□□□ -0.93
LCL3YGL085W PRP5P21372 849 aaPredicted RBP9.22□□□□□ -0.93
LCL3YGL085W YLR419WQ06698 1435 aaKnown RBP9.21□□□□□ -0.94
LCL3YGL085W FKS3Q04952 1785 aa9.2□□□□□ -0.94
LCL3YGL085W PRI1P10363 409 aa9.19□□□□□ -0.94
LCL3YGL085W YIL177CP40434 1758 aa9.18□□□□□ -0.94
LCL3YGL085W YJL225CP40889 1758 aa9.18□□□□□ -0.94
LCL3YGL085W MSB3P48566 633 aaPredicted RBP9.18□□□□□ -0.94
LCL3YGL085W BUD31P25337 157 aaPredicted RBP9.17□□□□□ -0.94
LCL3YGL085W CHZ1P40019 153 aaPredicted RBP9.15□□□□□ -0.94
LCL3YGL085W PRP43P53131 767 aaKnown RBP9.15□□□□□ -0.94
LCL3YGL085W YRF1-3P0CX14 1859 aa9.15□□□□□ -0.95
LCL3YGL085W YRF1-7P0CX15 1859 aa9.15□□□□□ -0.95
LCL3YGL085W YRF1-6P53819 1859 aa9.15□□□□□ -0.95
LCL3YGL085W LEU2P04173 364 aaPredicted RBP9.14□□□□□ -0.95
LCL3YGL085W MTR4P47047 1073 aaKnown RBP9.14□□□□□ -0.95
LCL3YGL085W RSF2P46974 1380 aa9.13□□□□□ -0.95
LCL3YGL085W YML133CQ03099 1374 aa9.12□□□□□ -0.95
LCL3YGL085W YLL067CQ07888 1374 aa9.12□□□□□ -0.95
LCL3YGL085W YLL066CQ99208 1374 aa9.12□□□□□ -0.95
LCL3YGL085W LEU3P08638 886 aa9.12□□□□□ -0.95
LCL3YGL085W IES2P40154 320 aa9.12□□□□□ -0.95
LCL3YGL085W TCB1Q12466 1186 aa9.12□□□□□ -0.95
LCL3YGL085W APC1P53886 1748 aa9.11□□□□□ -0.95
LCL3YGL085W CSE4P36012 229 aa9.11□□□□□ -0.95
LCL3YGL085W ORC1P54784 914 aaPredicted RBP9.11□□□□□ -0.95
LCL3YGL085W SLM3Q12093 417 aa9.11□□□□□ -0.95
LCL3YGL085W ROM2P51862 1356 aaKnown RBP9.11□□□□□ -0.95
LCL3YGL085W MLP1Q02455 1875 aaKnown RBP9.11□□□□□ -0.95
LCL3YGL085W RPS24AP0CX31 135 aaKnown RBP9.1□□□□□ -0.95
LCL3YGL085W RPS24BP0CX32 135 aaKnown RBP9.1□□□□□ -0.95
LCL3YGL085W SCT1P32784 759 aa9.09□□□□□ -0.95
LCL3YGL085W DOT5P40553 215 aa9.09□□□□□ -0.95
LCL3YGL085W EDE1P34216 1381 aa9.09□□□□□ -0.95
LCL3YGL085W UBP1P25037 809 aa9.07□□□□□ -0.96
LCL3YGL085W RPN11P43588 306 aaKnown RBP9.07□□□□□ -0.96
LCL3YGL085W FOX2Q02207 900 aaKnown RBP9.06□□□□□ -0.96
LCL3YGL085W SNF2P22082 1703 aa9.03□□□□□ -0.96
LCL3YGL085W XKS1P42826 600 aa9.03□□□□□ -0.96
LCL3YGL085W YEF3P16521 1044 aaKnown RBP9.02□□□□□ -0.97
LCL3YGL085W FKH1P40466 484 aa9.02□□□□□ -0.97
LCL3YGL085W YKL133CP36066 463 aa9.01□□□□□ -0.97
LCL3YGL085W ENP1P38333 483 aaKnown RBP9.01□□□□□ -0.97
LCL3YGL085W NPR2P39923 615 aa9□□□□□ -0.97
LCL3YGL085W YBL086CP38177 466 aa8.99□□□□□ -0.97
LCL3YGL085W YJL181WP46987 611 aa8.99□□□□□ -0.97
LCL3YGL085W DPS1P04802 557 aaKnown RBP8.98□□□□□ -0.97
LCL3YGL085W YRF1-4O13559 1382 aa8.98□□□□□ -0.97
LCL3YGL085W COBP00163 385 aa8.97□□□□□ -0.97
LCL3YGL085W PDI1P17967 522 aaKnown RBP8.97□□□□□ -0.97
LCL3YGL085W PRP40P33203 583 aaKnown RBP8.97□□□□□ -0.97
LCL3YGL085W GTT3P39996 337 aa8.97□□□□□ -0.97
LCL3YGL085W RTF1P53064 558 aa8.97□□□□□ -0.97
LCL3YGL085W LAM6Q08001 693 aa8.97□□□□□ -0.97
LCL3YGL085W YKR075CP36155 307 aa8.96□□□□□ -0.98
LCL3YGL085W RTG3P38165 486 aa8.96□□□□□ -0.98
LCL3YGL085W LYS4P49367 693 aaPredicted RBP8.96□□□□□ -0.98
LCL3YGL085W GAS4Q08271 471 aa8.96□□□□□ -0.98
LCL3YGL085W SIR4P11978 1358 aa8.96□□□□□ -0.98
LCL3YGL085W RIM15P43565 1770 aa8.96□□□□□ -0.98
LCL3YGL085W ISW2Q08773 1120 aa8.95□□□□□ -0.98
LCL3YGL085W AUS1Q08409 1394 aa8.95□□□□□ -0.98
LCL3YGL085W UGA2P38067 497 aa8.94□□□□□ -0.98
LCL3YGL085W ALD2P47771 506 aa8.93□□□□□ -0.98
LCL3YGL085W TAP42Q04372 366 aa8.93□□□□□ -0.98
LCL3YGL085W MHP1P43638 1398 aa8.93□□□□□ -0.98
LCL3YGL085W SEC3P33332 1336 aaKnown RBP8.92□□□□□ -0.98
LCL3YGL085W SSA2P10592 639 aaKnown RBP8.92□□□□□ -0.98
LCL3YGL085W GRX4P32642 244 aa8.92□□□□□ -0.98
LCL3YGL085W RCR1P38212 213 aa8.92□□□□□ -0.98
LCL3YGL085W CTH1P47976 325 aa8.92□□□□□ -0.98
LCL3YGL085W MEC3Q02574 474 aa8.92□□□□□ -0.98
LCL3YGL085W FRK1Q03002 865 aaPredicted RBP8.92□□□□□ -0.98
LCL3YGL085W ADE16P54113 591 aaKnown RBP8.9□□□□□ -0.98
LCL3YGL085W PDS5Q04264 1277 aa8.88□□□□□ -0.99
LCL3YGL085W HIM1Q06674 414 aa8.88□□□□□ -0.99
LCL3YGL085W RPO41P13433 1351 aaKnown RBP8.87□□□□□ -0.99
LCL3YGL085W POL5P39985 1022 aaKnown RBP8.87□□□□□ -0.99
LCL3YGL085W SPT7P35177 1332 aa8.85□□□□□ -0.99
LCL3YGL085W BDF1P35817 686 aa8.84□□□□□ -0.99
LCL3YGL085W KAR2P16474 682 aaKnown RBP8.83□□□□□ -1
LCL3YGL085W ATG13Q06628 738 aa8.83□□□□□ -1
LCL3YGL085W INP54Q08227 384 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms