RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	TY1A-DR5	P0CX65	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-ER2	P0CX66	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-GR3	P0CX67	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-LR1	P0CX68	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-MR2	P0CX69	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-JR2	P47099	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	ISM1	P48526	1002 aa		4.06	□□□□□ -1.76
DOT6	YER088C	HST2	P53686	357 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-DR1	Q03856	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-ML1	Q04706	440 aa	Known RBP	4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-BR	Q12217	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-NL2	Q12470	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-GR2	Q12485	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	SEC2	P17065	759 aa		4.05	□□□□□ -1.76
DOT6	YER088C	PTC2	P39966	464 aa	Known RBP	4.05	□□□□□ -1.76
DOT6	YER088C	ERF2	Q06551	359 aa		4.05	□□□□□ -1.76
DOT6	YER088C	BUD20	Q08004	166 aa	Predicted RBP	4.05	□□□□□ -1.76
DOT6	YER088C	CSN12	P47130	423 aa		4.04	□□□□□ -1.76
DOT6	YER088C	TYW1	Q08960	810 aa	Known RBP	4.04	□□□□□ -1.76
DOT6	YER088C	SCJ1	P25303	377 aa		4.04	□□□□□ -1.76
DOT6	YER088C	RTF1	P53064	558 aa		4.04	□□□□□ -1.76
DOT6	YER088C	KEX2	P13134	814 aa		4.03	□□□□□ -1.76
DOT6	YER088C	HPC2	Q01448	625 aa		4.03	□□□□□ -1.76
DOT6	YER088C	AGE1	Q04412	482 aa		4.03	□□□□□ -1.76
DOT6	YER088C	DMA2	P53924	522 aa		4.02	□□□□□ -1.77
DOT6	YER088C	YNL115C	P53925	644 aa		4.02	□□□□□ -1.77
DOT6	YER088C	GLN1	P32288	370 aa	Known RBP	4.02	□□□□□ -1.77
DOT6	YER088C	RSC30	P38781	883 aa		4.01	□□□□□ -1.77
DOT6	YER088C	YMR196W	Q04336	1088 aa		4.01	□□□□□ -1.77
DOT6	YER088C	MMP1	Q12372	583 aa		4.01	□□□□□ -1.77
DOT6	YER088C	ESS1	P22696	170 aa		4	□□□□□ -1.77
DOT6	YER088C	SSA2	P10592	639 aa	Known RBP	4	□□□□□ -1.77
DOT6	YER088C	YJU3	P28321	313 aa		4	□□□□□ -1.77
DOT6	YER088C	PRT1	P06103	763 aa	Known RBP	3.99	□□□□□ -1.77
DOT6	YER088C	SLY41	P22215	453 aa		3.99	□□□□□ -1.77
DOT6	YER088C	NPL4	P33755	580 aa		3.99	□□□□□ -1.77
DOT6	YER088C	VRP1	P37370	817 aa		3.99	□□□□□ -1.77
DOT6	YER088C	TFB3	Q03290	321 aa		3.99	□□□□□ -1.77
DOT6	YER088C	SDH2	P21801	266 aa		3.99	□□□□□ -1.77
DOT6	YER088C	TUB4	P53378	473 aa		3.99	□□□□□ -1.77
DOT6	YER088C	PKC1	P24583	1151 aa		3.98	□□□□□ -1.77
DOT6	YER088C	GCD11	P32481	527 aa	Known RBP	3.98	□□□□□ -1.77
DOT6	YER088C	BCK2	P33306	851 aa		3.98	□□□□□ -1.77
DOT6	YER088C	PAC1	P39946	494 aa	Known RBP	3.97	□□□□□ -1.77
DOT6	YER088C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
DOT6	YER088C	PKH3	Q03306	898 aa	Predicted RBP	3.97	□□□□□ -1.77
DOT6	YER088C	RAD59	Q12223	238 aa		3.97	□□□□□ -1.77
DOT6	YER088C	TRM1	P15565	570 aa	Known RBP	3.96	□□□□□ -1.78
DOT6	YER088C	SAS4	Q04003	481 aa		3.96	□□□□□ -1.78
DOT6	YER088C	XDJ1	P39102	459 aa		3.95	□□□□□ -1.78
DOT6	YER088C	RRN7	P40992	514 aa		3.95	□□□□□ -1.78
DOT6	YER088C	PUS6	P53294	404 aa		3.95	□□□□□ -1.78
DOT6	YER088C	MOD5	P07884	428 aa		3.94	□□□□□ -1.78
DOT6	YER088C	LAM6	Q08001	693 aa		3.94	□□□□□ -1.78
DOT6	YER088C	BRL1	P38770	471 aa		3.94	□□□□□ -1.78
DOT6	YER088C	GYP1	Q08484	637 aa		3.94	□□□□□ -1.78
DOT6	YER088C	ARG8	P18544	423 aa		3.93	□□□□□ -1.78
DOT6	YER088C	YDL206W	Q12424	762 aa		3.92	□□□□□ -1.78
DOT6	YER088C	PDC1	P06169	563 aa	Known RBP	3.92	□□□□□ -1.78
DOT6	YER088C	TPD3	P31383	635 aa		3.92	□□□□□ -1.78
DOT6	YER088C	RPA14	P50106	137 aa		3.92	□□□□□ -1.78
DOT6	YER088C	YPR097W	Q06839	1073 aa		3.92	□□□□□ -1.78
DOT6	YER088C	MAK16	P10962	306 aa	Predicted RBP	3.91	□□□□□ -1.78
DOT6	YER088C	BIO2	P32451	375 aa		3.91	□□□□□ -1.78
DOT6	YER088C	CSE4	P36012	229 aa		3.91	□□□□□ -1.78
DOT6	YER088C	SPT16	P32558	1035 aa	Known RBP	3.9	□□□□□ -1.78
DOT6	YER088C	HXT10	P43581	546 aa		3.9	□□□□□ -1.79
DOT6	YER088C	RRD1	P40454	393 aa	Known RBP	3.89	□□□□□ -1.79
DOT6	YER088C	CST6	P40535	587 aa		3.89	□□□□□ -1.79
DOT6	YER088C	HGH1	P48362	394 aa	Known RBP	3.89	□□□□□ -1.79
DOT6	YER088C	TBF1	Q02457	562 aa		3.89	□□□□□ -1.79
DOT6	YER088C	TAF7	Q05021	590 aa		3.89	□□□□□ -1.79
DOT6	YER088C	SUP45	P12385	437 aa	Known RBP	3.88	□□□□□ -1.79
DOT6	YER088C	PAT1	P25644	796 aa	Known RBP	3.88	□□□□□ -1.79
DOT6	YER088C	MRF1	P30775	413 aa	Predicted RBP	3.88	□□□□□ -1.79
DOT6	YER088C	YBL036C	P38197	257 aa		3.88	□□□□□ -1.79
DOT6	YER088C	BIM1	P40013	344 aa		3.88	□□□□□ -1.79
DOT6	YER088C	ATG32	P40458	529 aa		3.88	□□□□□ -1.79
DOT6	YER088C	YJL007C	P47080	104 aa		3.88	□□□□□ -1.79
DOT6	YER088C	ALR1	Q08269	859 aa		3.88	□□□□□ -1.79
DOT6	YER088C	YDJ1	P25491	409 aa	Known RBP	3.87	□□□□□ -1.79
DOT6	YER088C	BDP1	P46678	594 aa		3.87	□□□□□ -1.79
DOT6	YER088C	KXD1	P53158	218 aa		3.87	□□□□□ -1.79
DOT6	YER088C	YPR084W	Q06821	456 aa		3.87	□□□□□ -1.79
DOT6	YER088C	NAF1	P53919	492 aa	Known RBP	3.87	□□□□□ -1.79
DOT6	YER088C	RAS1	P01119	309 aa		3.86	□□□□□ -1.79
DOT6	YER088C	ERG12	P07277	443 aa		3.86	□□□□□ -1.79
DOT6	YER088C	TIF1	P10081	395 aa	Known RBP	3.86	□□□□□ -1.79
DOT6	YER088C	AMS1	P22855	1083 aa		3.86	□□□□□ -1.79
DOT6	YER088C	SPT5	P27692	1063 aa	Known RBP	3.86	□□□□□ -1.79
DOT6	YER088C	FIG4	P42837	879 aa		3.86	□□□□□ -1.79
DOT6	YER088C	VAC17	P25591	423 aa		3.85	□□□□□ -1.79
DOT6	YER088C	YNL108C	P53929	270 aa		3.85	□□□□□ -1.79
DOT6	YER088C	ENO2	P00925	437 aa	Known RBP	3.84	□□□□□ -1.79
DOT6	YER088C	RIM21	P48565	533 aa		3.83	□□□□□ -1.8
DOT6	YER088C	PUS5	Q06244	254 aa		3.83	□□□□□ -1.8
DOT6	YER088C	RLF2	Q12495	606 aa		3.83	□□□□□ -1.8
DOT6	YER088C	YEL077C	Q3E7X8	1277 aa		3.83	□□□□□ -1.8
DOT6	YER088C	APL6	P46682	809 aa		3.83	□□□□□ -1.8
DOT6	YER088C	FRK1	Q03002	865 aa	Predicted RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 108 ms