RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TY1A-AP0CX57 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-PR1P0CX58 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-ORP0CX59 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-PR2P0CX60 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-DR5P0CX65 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-ER2P0CX66 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-GR3P0CX67 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-LR1P0CX68 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-MR2P0CX69 440 aa5.38□□□□□ -1.55
VPS52YDR484W PAT1P25644 796 aaKnown RBP5.38□□□□□ -1.55
VPS52YDR484W IFH1P39520 1085 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-JR2P47099 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-DR1Q03856 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-ML1Q04706 440 aaKnown RBP5.38□□□□□ -1.55
VPS52YDR484W TY1A-BRQ12217 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-NL2Q12470 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-GR2Q12485 440 aa5.38□□□□□ -1.55
VPS52YDR484W RRN7P40992 514 aa5.36□□□□□ -1.55
VPS52YDR484W ASH1P34233 588 aa5.35□□□□□ -1.55
VPS52YDR484W LCB5Q06147 687 aaKnown RBP5.35□□□□□ -1.55
VPS52YDR484W YDL176WQ12027 708 aa5.33□□□□□ -1.56
VPS52YDR484W HST3P53687 447 aa5.32□□□□□ -1.56
VPS52YDR484W MTC5Q03897 1148 aa5.32□□□□□ -1.56
VPS52YDR484W AFT1P22149 690 aa5.29□□□□□ -1.56
VPS52YDR484W MET32Q12041 191 aa5.29□□□□□ -1.56
VPS52YDR484W ORC6P38826 435 aa5.28□□□□□ -1.56
VPS52YDR484W RRD1P40454 393 aaKnown RBP5.28□□□□□ -1.56
VPS52YDR484W YPR109WQ06104 294 aa5.28□□□□□ -1.56
VPS52YDR484W MVP1P40959 511 aaKnown RBP5.27□□□□□ -1.57
VPS52YDR484W DMA1P38823 416 aa5.26□□□□□ -1.57
VPS52YDR484W REF2P42073 533 aaPredicted RBP5.26□□□□□ -1.57
VPS52YDR484W YJR115WP47152 169 aa5.24□□□□□ -1.57
VPS52YDR484W KEX2P13134 814 aa5.23□□□□□ -1.57
VPS52YDR484W PUS5Q06244 254 aa5.22□□□□□ -1.57
VPS52YDR484W ERF2Q06551 359 aa5.22□□□□□ -1.57
VPS52YDR484W RGR1P19263 1082 aa5.2□□□□□ -1.58
VPS52YDR484W CAF120P53836 1060 aa5.2□□□□□ -1.58
VPS52YDR484W MOD5P07884 428 aa5.19□□□□□ -1.58
VPS52YDR484W PAC1P39946 494 aaKnown RBP5.19□□□□□ -1.58
VPS52YDR484W TRK2P28584 889 aa5.17□□□□□ -1.58
VPS52YDR484W ACO2P39533 789 aa5.17□□□□□ -1.58
VPS52YDR484W COX6P00427 148 aa5.16□□□□□ -1.58
VPS52YDR484W MAK21Q12176 1025 aaKnown RBP5.15□□□□□ -1.59
VPS52YDR484W YGR035CP53222 116 aa5.13□□□□□ -1.59
VPS52YDR484W YLR346CQ06139 101 aa5.13□□□□□ -1.59
VPS52YDR484W TUB4P53378 473 aa5.13□□□□□ -1.59
VPS52YDR484W MSB3P48566 633 aaPredicted RBP5.11□□□□□ -1.59
VPS52YDR484W OPT2Q06593 877 aa5.11□□□□□ -1.59
VPS52YDR484W AGE1Q04412 482 aa5.1□□□□□ -1.59
VPS52YDR484W SRF1Q12516 437 aa5.1□□□□□ -1.59
VPS52YDR484W UGA3P26370 528 aa5.09□□□□□ -1.59
VPS52YDR484W YPR148CQ06523 435 aa5.09□□□□□ -1.59
VPS52YDR484W PTK2P47116 818 aaKnown RBP5.07□□□□□ -1.6
VPS52YDR484W KXD1P53158 218 aa5.07□□□□□ -1.6
VPS52YDR484W VPS70P47161 811 aa5.07□□□□□ -1.6
VPS52YDR484W SYH1Q02875 849 aaKnown RBP5.07□□□□□ -1.6
VPS52YDR484W HPF1Q05164 967 aa5.06□□□□□ -1.6
VPS52YDR484W GLY1P37303 387 aaKnown RBP5.05□□□□□ -1.6
VPS52YDR484W YIR007WP40566 764 aa5.05□□□□□ -1.6
VPS52YDR484W YNL115CP53925 644 aa5.04□□□□□ -1.6
VPS52YDR484W RTF1P53064 558 aa5.03□□□□□ -1.6
VPS52YDR484W SCW11P53189 542 aa5.03□□□□□ -1.6
VPS52YDR484W TPD3P31383 635 aa5.03□□□□□ -1.6
VPS52YDR484W ICP55P40051 511 aa5.03□□□□□ -1.6
VPS52YDR484W NUP85P46673 744 aa5.03□□□□□ -1.6
VPS52YDR484W SAS10Q12136 610 aaPredicted RBP5.03□□□□□ -1.6
VPS52YDR484W HXT10P43581 546 aa5.02□□□□□ -1.61
VPS52YDR484W TYW1Q08960 810 aaKnown RBP5.02□□□□□ -1.61
VPS52YDR484W CLB5P30283 435 aa5.01□□□□□ -1.61
VPS52YDR484W MIP1P15801 1254 aa5□□□□□ -1.61
VPS52YDR484W PSE1P32337 1089 aaKnown RBP5□□□□□ -1.61
VPS52YDR484W KIP2P28743 706 aa4.99□□□□□ -1.61
VPS52YDR484W LSB3P43603 459 aaKnown RBP4.99□□□□□ -1.61
VPS52YDR484W YPR204WQ08995 1032 aa4.99□□□□□ -1.61
VPS52YDR484W PUS1Q12211 544 aaKnown RBP4.99□□□□□ -1.61
VPS52YDR484W TY1A-BLQ12266 440 aa4.98□□□□□ -1.61
VPS52YDR484W PDC1P06169 563 aaKnown RBP4.97□□□□□ -1.61
VPS52YDR484W IXR1P33417 597 aa4.95□□□□□ -1.62
VPS52YDR484W SIT4P20604 311 aa4.95□□□□□ -1.62
VPS52YDR484W CKB1P43639 278 aa4.95□□□□□ -1.62
VPS52YDR484W RTT106P40161 455 aa4.93□□□□□ -1.62
VPS52YDR484W UBP2Q01476 1272 aa4.93□□□□□ -1.62
VPS52YDR484W MRT4P33201 236 aaKnown RBP4.93□□□□□ -1.62
VPS52YDR484W LSC2P53312 427 aa4.93□□□□□ -1.62
VPS52YDR484W PHM7Q12252 991 aa4.91□□□□□ -1.62
VPS52YDR484W ARG82P07250 355 aa4.91□□□□□ -1.62
VPS52YDR484W DPH6Q12429 685 aa4.91□□□□□ -1.62
VPS52YDR484W ALR1Q08269 859 aa4.9□□□□□ -1.62
VPS52YDR484W SLY41P22215 453 aa4.89□□□□□ -1.63
VPS52YDR484W TEA1P47988 759 aa4.89□□□□□ -1.63
VPS52YDR484W NRD1P53617 575 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
VPS52YDR484W PBS2P08018 668 aa4.89□□□□□ -1.63
VPS52YDR484W MDJ1P35191 511 aa4.88□□□□□ -1.63
VPS52YDR484W RPA14P50106 137 aa4.88□□□□□ -1.63
VPS52YDR484W YPR097WQ06839 1073 aa4.87□□□□□ -1.63
VPS52YDR484W SPB4P25808 606 aaPredicted RBP4.87□□□□□ -1.63
VPS52YDR484W AAD14P42884 376 aa4.87□□□□□ -1.63
VPS52YDR484W PUS6P53294 404 aa4.87□□□□□ -1.63
VPS52YDR484W NIS1P53939 407 aa4.87□□□□□ -1.63
VPS52YDR484W ROG3P43602 733 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 141.7 ms