RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	PPH3	P32345	308 aa		13.62	□□□□□ -0.23
MRP20	YDR405W	YIL055C	P40523	627 aa	Known RBP	13.62	□□□□□ -0.23
MRP20	YDR405W	ENT1	Q12518	454 aa		13.62	□□□□□ -0.23
MRP20	YDR405W	YLR419W	Q06698	1435 aa	Known RBP	13.57	□□□□□ -0.24
MRP20	YDR405W	ADE6	P38972	1358 aa	Known RBP	13.57	□□□□□ -0.24
MRP20	YDR405W	PRP45	P28004	379 aa	Predicted RBP	13.56	□□□□□ -0.24
MRP20	YDR405W	CHZ1	P40019	153 aa	Predicted RBP	13.56	□□□□□ -0.24
MRP20	YDR405W	ENV9	Q08651	330 aa		13.56	□□□□□ -0.24
MRP20	YDR405W	GLN1	P32288	370 aa	Known RBP	13.54	□□□□□ -0.24
MRP20	YDR405W	PRP5	P21372	849 aa	Predicted RBP	13.53	□□□□□ -0.24
MRP20	YDR405W	LEU2	P04173	364 aa	Predicted RBP	13.52	□□□□□ -0.25
MRP20	YDR405W	MTR4	P47047	1073 aa	Known RBP	13.52	□□□□□ -0.25
MRP20	YDR405W	IMH1	Q06704	911 aa	Known RBP	13.51	□□□□□ -0.25
MRP20	YDR405W	PRP43	P53131	767 aa	Known RBP	13.5	□□□□□ -0.25
MRP20	YDR405W	ORC1	P54784	914 aa	Predicted RBP	13.5	□□□□□ -0.25
MRP20	YDR405W	RRP5	Q05022	1729 aa	Known RBP	13.49	□□□□□ -0.25
MRP20	YDR405W	YMR074C	Q04773	145 aa		13.44	□□□□□ -0.26
MRP20	YDR405W	CSE4	P36012	229 aa		13.41	□□□□□ -0.26
MRP20	YDR405W	MSB3	P48566	633 aa	Predicted RBP	13.41	□□□□□ -0.26
MRP20	YDR405W	YRF1-2	P40105	1681 aa		13.4	□□□□□ -0.26
MRP20	YDR405W	POL5	P39985	1022 aa	Known RBP	13.39	□□□□□ -0.27
MRP20	YDR405W	FKH1	P40466	484 aa		13.39	□□□□□ -0.27
MRP20	YDR405W	TCB1	Q12466	1186 aa		13.39	□□□□□ -0.27
MRP20	YDR405W	TY4B-H	P0C2J7	1802 aa		13.39	□□□□□ -0.27
MRP20	YDR405W	TY4B-J	P47024	1803 aa		13.39	□□□□□ -0.27
MRP20	YDR405W	SLM3	Q12093	417 aa		13.38	□□□□□ -0.27
MRP20	YDR405W	YML133C	Q03099	1374 aa		13.37	□□□□□ -0.27
MRP20	YDR405W	YLL067C	Q07888	1374 aa		13.37	□□□□□ -0.27
MRP20	YDR405W	YLL066C	Q99208	1374 aa		13.37	□□□□□ -0.27
MRP20	YDR405W	RPS24A	P0CX31	135 aa	Known RBP	13.37	□□□□□ -0.27
MRP20	YDR405W	RPS24B	P0CX32	135 aa	Known RBP	13.37	□□□□□ -0.27
MRP20	YDR405W	RSF2	P46974	1380 aa		13.34	□□□□□ -0.27
MRP20	YDR405W	LEU3	P08638	886 aa		13.33	□□□□□ -0.28
MRP20	YDR405W	IES2	P40154	320 aa		13.33	□□□□□ -0.28
MRP20	YDR405W	MHP1	P43638	1398 aa		13.32	□□□□□ -0.28
MRP20	YDR405W	PRI1	P10363	409 aa		13.32	□□□□□ -0.28
MRP20	YDR405W	RTF1	P53064	558 aa		13.32	□□□□□ -0.28
MRP20	YDR405W	PDI1	P17967	522 aa	Known RBP	13.31	□□□□□ -0.28
MRP20	YDR405W	ROM2	P51862	1356 aa	Known RBP	13.3	□□□□□ -0.28
MRP20	YDR405W	YEF3	P16521	1044 aa	Known RBP	13.29	□□□□□ -0.28
MRP20	YDR405W	EDE1	P34216	1381 aa		13.29	□□□□□ -0.28
MRP20	YDR405W	RTG3	P38165	486 aa		13.27	□□□□□ -0.29
MRP20	YDR405W	ENP1	P38333	483 aa	Known RBP	13.26	□□□□□ -0.29
MRP20	YDR405W	PDS5	Q04264	1277 aa		13.26	□□□□□ -0.29
MRP20	YDR405W	TAP42	Q04372	366 aa		13.26	□□□□□ -0.29
MRP20	YDR405W	UBP1	P25037	809 aa		13.25	□□□□□ -0.29
MRP20	YDR405W	BUD31	P25337	157 aa	Predicted RBP	13.25	□□□□□ -0.29
MRP20	YDR405W	GRX4	P32642	244 aa		13.25	□□□□□ -0.29
MRP20	YDR405W	DOT5	P40553	215 aa		13.24	□□□□□ -0.29
MRP20	YDR405W	DPS1	P04802	557 aa	Known RBP	13.23	□□□□□ -0.29
MRP20	YDR405W	XKS1	P42826	600 aa		13.23	□□□□□ -0.29
MRP20	YDR405W	YKL133C	P36066	463 aa		13.2	□□□□□ -0.3
MRP20	YDR405W	GAS4	Q08271	471 aa		13.2	□□□□□ -0.3
MRP20	YDR405W	MLP1	Q02455	1875 aa	Known RBP	13.19	□□□□□ -0.3
MRP20	YDR405W	URB1	P34241	1764 aa	Known RBP	13.19	□□□□□ -0.3
MRP20	YDR405W	RPN11	P43588	306 aa	Known RBP	13.18	□□□□□ -0.3
MRP20	YDR405W	FOX2	Q02207	900 aa	Known RBP	13.18	□□□□□ -0.3
MRP20	YDR405W	SEC3	P33332	1336 aa	Known RBP	13.17	□□□□□ -0.3
MRP20	YDR405W	YJL181W	P46987	611 aa		13.16	□□□□□ -0.3
MRP20	YDR405W	MEC3	Q02574	474 aa		13.16	□□□□□ -0.3
MRP20	YDR405W	LAM6	Q08001	693 aa		13.16	□□□□□ -0.3
MRP20	YDR405W	SIR4	P11978	1358 aa		13.15	□□□□□ -0.3
MRP20	YDR405W	AUS1	Q08409	1394 aa		13.14	□□□□□ -0.31
MRP20	YDR405W	PRP40	P33203	583 aa	Known RBP	13.13	□□□□□ -0.31
MRP20	YDR405W	GTT3	P39996	337 aa		13.12	□□□□□ -0.31
MRP20	YDR405W	APC1	P53886	1748 aa		13.12	□□□□□ -0.31
MRP20	YDR405W	KAR2	P16474	682 aa	Known RBP	13.11	□□□□□ -0.31
MRP20	YDR405W	HIM1	Q06674	414 aa		13.11	□□□□□ -0.31
MRP20	YDR405W	COB	P00163	385 aa		13.1	□□□□□ -0.31
MRP20	YDR405W	RCR1	P38212	213 aa		13.1	□□□□□ -0.31
MRP20	YDR405W	RPO41	P13433	1351 aa	Known RBP	13.08	□□□□□ -0.31
MRP20	YDR405W	YRF1-3	P0CX14	1859 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	YRF1-7	P0CX15	1859 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	YRF1-6	P53819	1859 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	YIL177C	P40434	1758 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	YJL225C	P40889	1758 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	FKS3	Q04952	1785 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	NPR2	P39923	615 aa		13.08	□□□□□ -0.32
MRP20	YDR405W	YKR075C	P36155	307 aa		13.07	□□□□□ -0.32
MRP20	YDR405W	YRF1-4	O13559	1382 aa		13.06	□□□□□ -0.32
MRP20	YDR405W	ALD2	P47771	506 aa		13.04	□□□□□ -0.32
MRP20	YDR405W	UGA2	P38067	497 aa		13.03	□□□□□ -0.32
MRP20	YDR405W	YBL086C	P38177	466 aa		13.03	□□□□□ -0.32
MRP20	YDR405W	ADE16	P54113	591 aa	Known RBP	13.03	□□□□□ -0.32
MRP20	YDR405W	CTF4	Q01454	927 aa		13.02	□□□□□ -0.33
MRP20	YDR405W	FRK1	Q03002	865 aa	Predicted RBP	13.02	□□□□□ -0.33
MRP20	YDR405W	LYS4	P49367	693 aa	Predicted RBP	13	□□□□□ -0.33
MRP20	YDR405W	ATG13	Q06628	738 aa		13	□□□□□ -0.33
MRP20	YDR405W	SPT7	P35177	1332 aa		12.99	□□□□□ -0.33
MRP20	YDR405W	PAP2	P53632	584 aa	Known RBP	12.99	□□□□□ -0.33
MRP20	YDR405W	SNF2	P22082	1703 aa		12.99	□□□□□ -0.33
MRP20	YDR405W	DSD1	P53095	428 aa		12.98	□□□□□ -0.33
MRP20	YDR405W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	12.97	□□□□□ -0.33	not detected
MRP20	YDR405W	INP54	Q08227	384 aa	Known RBP	12.97	□□□□□ -0.33
MRP20	YDR405W	TRK1	P12685	1235 aa		12.96	□□□□□ -0.33
MRP20	YDR405W	IOC4	Q04213	475 aa		12.96	□□□□□ -0.33
MRP20	YDR405W	SSA2	P10592	639 aa	Known RBP	12.95	□□□□□ -0.34
MRP20	YDR405W	OSM1	P21375	501 aa	Known RBP	12.95	□□□□□ -0.34
MRP20	YDR405W	MSB4	Q12317	492 aa		12.95	□□□□□ -0.34
MRP20	YDR405W	AKL1	P38080	1108 aa	Known RBP	12.94	□□□□□ -0.34

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms