RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C NUD1P32336 851 aa8.89□□□□□ -0.99
LSM6YDR378C YJL171CP46992 396 aa8.89□□□□□ -0.99
LSM6YDR378C YNL115CP53925 644 aa8.88□□□□□ -0.99
LSM6YDR378C PDR1P12383 1068 aa8.87□□□□□ -0.99
LSM6YDR378C SLY41P22215 453 aa8.87□□□□□ -0.99
LSM6YDR378C RTF1P53064 558 aa8.87□□□□□ -0.99
LSM6YDR378C BMT6Q12291 365 aa8.87□□□□□ -0.99
LSM6YDR378C BNI4P53858 892 aa8.85□□□□□ -0.99
LSM6YDR378C SPT23P35210 1082 aa8.84□□□□□ -0.99
LSM6YDR378C YBL036CP38197 257 aa8.84□□□□□ -0.99
LSM6YDR378C YJL007CP47080 104 aa8.84□□□□□ -0.99
LSM6YDR378C RAD59Q12223 238 aa8.84□□□□□ -0.99
LSM6YDR378C KEX2P13134 814 aa8.83□□□□□ -1
LSM6YDR378C ARG8P18544 423 aa8.83□□□□□ -1
LSM6YDR378C YJU3P28321 313 aa8.83□□□□□ -1
LSM6YDR378C YDR344CQ05510 147 aa8.83□□□□□ -1
LSM6YDR378C PTC2P39966 464 aaKnown RBP8.81□□□□□ -1
LSM6YDR378C GCD11P32481 527 aaKnown RBP8.8□□□□□ -1
LSM6YDR378C ISM1P48526 1002 aa8.8□□□□□ -1
LSM6YDR378C LAM6Q08001 693 aa8.8□□□□□ -1
LSM6YDR378C CSE4P36012 229 aa8.79□□□□□ -1
LSM6YDR378C PRE3P38624 215 aa8.79□□□□□ -1
LSM6YDR378C BIM1P40013 344 aa8.79□□□□□ -1
LSM6YDR378C STR2P47164 639 aa8.78□□□□□ -1
LSM6YDR378C ERF2Q06551 359 aa8.78□□□□□ -1
LSM6YDR378C RPL34BP40525 121 aaKnown RBP8.77□□□□□ -1.01
LSM6YDR378C PUS6P53294 404 aa8.77□□□□□ -1.01
LSM6YDR378C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
LSM6YDR378C RAM1P22007 431 aa8.75□□□□□ -1.01
LSM6YDR378C CHL1P22516 861 aaPredicted RBP8.75□□□□□ -1.01
LSM6YDR378C TBF1Q02457 562 aa8.75□□□□□ -1.01
LSM6YDR378C TRM1P15565 570 aaKnown RBP8.74□□□□□ -1.01
LSM6YDR378C RSC30P38781 883 aa8.74□□□□□ -1.01
LSM6YDR378C ATG32P40458 529 aa8.74□□□□□ -1.01
LSM6YDR378C YML082WQ04533 649 aaKnown RBP8.74□□□□□ -1.01
LSM6YDR378C BUD20Q08004 166 aaPredicted RBP8.74□□□□□ -1.01
LSM6YDR378C PRT1P06103 763 aaKnown RBP8.71□□□□□ -1.02
LSM6YDR378C TIF1P10081 395 aaKnown RBP8.69□□□□□ -1.02
LSM6YDR378C SEC2P17065 759 aa8.69□□□□□ -1.02
LSM6YDR378C PAT1P25644 796 aaKnown RBP8.69□□□□□ -1.02
LSM6YDR378C BIO2P32451 375 aa8.69□□□□□ -1.02
LSM6YDR378C TUB4P53378 473 aa8.69□□□□□ -1.02
LSM6YDR378C TY1A-DR4O74302 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-HP0C2I4 478 aaKnown RBP8.68□□□□□ -1.02
LSM6YDR378C TY1A-AP0CX57 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-PR1P0CX58 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-ORP0CX59 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-PR2P0CX60 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-DR5P0CX65 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-ER2P0CX66 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-GR3P0CX67 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-LR1P0CX68 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-MR2P0CX69 440 aa8.68□□□□□ -1.02
LSM6YDR378C MAK16P10962 306 aaPredicted RBP8.68□□□□□ -1.02
LSM6YDR378C SPT5P27692 1063 aaKnown RBP8.68□□□□□ -1.02
LSM6YDR378C TY1A-JR2P47099 440 aa8.68□□□□□ -1.02
LSM6YDR378C YNL108CP53929 270 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-DR1Q03856 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-ML1Q04706 440 aaKnown RBP8.68□□□□□ -1.02
LSM6YDR378C TY1A-BRQ12217 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-NL2Q12470 440 aa8.68□□□□□ -1.02
LSM6YDR378C TY1A-GR2Q12485 440 aa8.68□□□□□ -1.02
LSM6YDR378C YPR015CQ12531 247 aa8.68□□□□□ -1.02
LSM6YDR378C RTG2P32608 588 aaKnown RBP8.65□□□□□ -1.02
LSM6YDR378C AGE1Q04412 482 aa8.65□□□□□ -1.02
LSM6YDR378C YDL206WQ12424 762 aa8.65□□□□□ -1.02
LSM6YDR378C SPT16P32558 1035 aaKnown RBP8.63□□□□□ -1.03
LSM6YDR378C RRN7P40992 514 aa8.63□□□□□ -1.03
LSM6YDR378C RPA14P50106 137 aa8.63□□□□□ -1.03
LSM6YDR378C GYP1Q08484 637 aa8.63□□□□□ -1.03
LSM6YDR378C ERG12P07277 443 aa8.62□□□□□ -1.03
LSM6YDR378C SUP45P12385 437 aaKnown RBP8.62□□□□□ -1.03
LSM6YDR378C YPR204WQ08995 1032 aa8.62□□□□□ -1.03
LSM6YDR378C YDJ1P25491 409 aaKnown RBP8.61□□□□□ -1.03
LSM6YDR378C KXD1P53158 218 aa8.61□□□□□ -1.03
LSM6YDR378C NAF1P53919 492 aaKnown RBP8.61□□□□□ -1.03
LSM6YDR378C SAS4Q04003 481 aa8.61□□□□□ -1.03
LSM6YDR378C ALR1Q08269 859 aa8.61□□□□□ -1.03
LSM6YDR378C PAC1P39946 494 aaKnown RBP8.59□□□□□ -1.03
LSM6YDR378C YPR097WQ06839 1073 aa8.59□□□□□ -1.03
LSM6YDR378C ENO2P00925 437 aaKnown RBP8.57□□□□□ -1.04
LSM6YDR378C YPP1P46951 817 aa8.57□□□□□ -1.04
LSM6YDR378C SSA4P22202 642 aaKnown RBP8.56□□□□□ -1.04
LSM6YDR378C PDC1P06169 563 aaKnown RBP8.55□□□□□ -1.04
LSM6YDR378C VRP1P37370 817 aa8.54□□□□□ -1.04
LSM6YDR378C MRF1P30775 413 aaPredicted RBP8.53□□□□□ -1.04
LSM6YDR378C HXT10P43581 546 aa8.53□□□□□ -1.04
LSM6YDR378C ENO1P00924 437 aaKnown RBP8.52□□□□□ -1.05
LSM6YDR378C TTI1P36097 1038 aa8.52□□□□□ -1.05
LSM6YDR378C MCM16Q12262 181 aa8.52□□□□□ -1.05
LSM6YDR378C TEC1P18412 486 aa8.51□□□□□ -1.05
LSM6YDR378C CPS1P27614 576 aa8.51□□□□□ -1.05
LSM6YDR378C RIM21P48565 533 aa8.51□□□□□ -1.05
LSM6YDR378C SUB2Q07478 446 aaKnown RBP8.51□□□□□ -1.05
LSM6YDR378C SIS2P36024 562 aa8.5□□□□□ -1.05
LSM6YDR378C MRX10Q05648 414 aa8.5□□□□□ -1.05
LSM6YDR378C GUT2P32191 649 aa8.49□□□□□ -1.05
LSM6YDR378C STE20Q03497 939 aaKnown RBP8.49□□□□□ -1.05
LSM6YDR378C TPD3P31383 635 aa8.48□□□□□ -1.05
LSM6YDR378C FIG4P42837 879 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms