RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YPR109W	Q06104	294 aa		4.45	□□□□□ -1.7
TFB1	YDR311W	BRL1	P38770	471 aa		4.44	□□□□□ -1.7
TFB1	YDR311W	SLX8	P40072	274 aa		4.44	□□□□□ -1.7
TFB1	YDR311W	STR2	P47164	639 aa		4.44	□□□□□ -1.7
TFB1	YDR311W	ISM1	P48526	1002 aa		4.44	□□□□□ -1.7
TFB1	YDR311W	SSA1	P10591	642 aa	Known RBP	4.44	□□□□□ -1.7
TFB1	YDR311W	GLN1	P32288	370 aa	Known RBP	4.44	□□□□□ -1.7
TFB1	YDR311W	PSE1	P32337	1089 aa	Known RBP	4.44	□□□□□ -1.7
TFB1	YDR311W	BIM1	P40013	344 aa		4.44	□□□□□ -1.7
TFB1	YDR311W	DPS1	P04802	557 aa	Known RBP	4.43	□□□□□ -1.7
TFB1	YDR311W	NUD1	P32336	851 aa		4.43	□□□□□ -1.7
TFB1	YDR311W	YJL007C	P47080	104 aa		4.43	□□□□□ -1.7
TFB1	YDR311W	NOP8	Q08287	484 aa	Predicted RBP	4.43	□□□□□ -1.7
TFB1	YDR311W	GEF1	P37020	779 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	ATG32	P40458	529 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	CSN12	P47130	423 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	SAS4	Q04003	481 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	GYP1	Q08484	637 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	SDH2	P21801	266 aa		4.42	□□□□□ -1.7
TFB1	YDR311W	PRT1	P06103	763 aa	Known RBP	4.41	□□□□□ -1.7
TFB1	YDR311W	SSA2	P10592	639 aa	Known RBP	4.4	□□□□□ -1.7
TFB1	YDR311W	SEC2	P17065	759 aa		4.4	□□□□□ -1.7
TFB1	YDR311W	KTR1	P27810	393 aa	Known RBP	4.4	□□□□□ -1.7
TFB1	YDR311W	TY1A-DR4	O74302	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-H	P0C2I4	478 aa	Known RBP	4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-A	P0CX57	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-PR1	P0CX58	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-OR	P0CX59	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-PR2	P0CX60	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-DR5	P0CX65	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-ER2	P0CX66	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-GR3	P0CX67	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-LR1	P0CX68	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-MR2	P0CX69	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-JR2	P47099	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-DR1	Q03856	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-ML1	Q04706	440 aa	Known RBP	4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-BR	Q12217	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-NL2	Q12470	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	TY1A-GR2	Q12485	440 aa		4.4	□□□□□ -1.71
TFB1	YDR311W	RAS1	P01119	309 aa		4.39	□□□□□ -1.71
TFB1	YDR311W	ERG12	P07277	443 aa		4.38	□□□□□ -1.71
TFB1	YDR311W	NPL4	P33755	580 aa		4.38	□□□□□ -1.71
TFB1	YDR311W	TYW1	Q08960	810 aa	Known RBP	4.38	□□□□□ -1.71
TFB1	YDR311W	TIF1	P10081	395 aa	Known RBP	4.38	□□□□□ -1.71
TFB1	YDR311W	GCD11	P32481	527 aa	Known RBP	4.38	□□□□□ -1.71
TFB1	YDR311W	ERF2	Q06551	359 aa		4.37	□□□□□ -1.71
TFB1	YDR311W	AMS1	P22855	1083 aa		4.36	□□□□□ -1.71
TFB1	YDR311W	CLB5	P30283	435 aa		4.36	□□□□□ -1.71
TFB1	YDR311W	SRC1	Q03707	834 aa		4.36	□□□□□ -1.71
TFB1	YDR311W	KEX2	P13134	814 aa		4.35	□□□□□ -1.71
TFB1	YDR311W	SSA4	P22202	642 aa	Known RBP	4.35	□□□□□ -1.71
TFB1	YDR311W	CPS1	P27614	576 aa		4.35	□□□□□ -1.71
TFB1	YDR311W	TEA1	P47988	759 aa		4.35	□□□□□ -1.71
TFB1	YDR311W	SIT4	P20604	311 aa		4.34	□□□□□ -1.71
TFB1	YDR311W	MRF1	P30775	413 aa	Predicted RBP	4.34	□□□□□ -1.71
TFB1	YDR311W	BIO2	P32451	375 aa		4.33	□□□□□ -1.72
TFB1	YDR311W	RTG2	P32608	588 aa	Known RBP	4.33	□□□□□ -1.72
TFB1	YDR311W	RPL34B	P40525	121 aa	Known RBP	4.33	□□□□□ -1.72
TFB1	YDR311W	NIS1	P53939	407 aa		4.33	□□□□□ -1.72
TFB1	YDR311W	NOB1	Q08444	459 aa	Known RBP	4.33	□□□□□ -1.72
TFB1	YDR311W	TTI1	P36097	1038 aa		4.32	□□□□□ -1.72
TFB1	YDR311W	YBL036C	P38197	257 aa		4.32	□□□□□ -1.72
TFB1	YDR311W	ORC1	P54784	914 aa	Predicted RBP	4.32	□□□□□ -1.72
TFB1	YDR311W	YPR204W	Q08995	1032 aa		4.32	□□□□□ -1.72
TFB1	YDR311W	YEL077C	Q3E7X8	1277 aa		4.32	□□□□□ -1.72
TFB1	YDR311W	SPT16	P32558	1035 aa	Known RBP	4.31	□□□□□ -1.72
TFB1	YDR311W	RTF1	P53064	558 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	YNL108C	P53929	270 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	RRN7	P40992	514 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	MRX12	P47084	519 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	YNL115C	P53925	644 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	AGE1	Q04412	482 aa		4.31	□□□□□ -1.72
TFB1	YDR311W	SCJ1	P25303	377 aa		4.3	□□□□□ -1.72
TFB1	YDR311W	CST6	P40535	587 aa		4.3	□□□□□ -1.72
TFB1	YDR311W	FPK1	P53739	893 aa		4.29	□□□□□ -1.72
TFB1	YDR311W	PAC1	P39946	494 aa	Known RBP	4.29	□□□□□ -1.72
TFB1	YDR311W	TUB4	P53378	473 aa		4.29	□□□□□ -1.72
TFB1	YDR311W	RPL34A	P87262	121 aa	Predicted RBP	4.29	□□□□□ -1.72
TFB1	YDR311W	YML083C	Q04526	418 aa		4.29	□□□□□ -1.72
TFB1	YDR311W	LAM6	Q08001	693 aa		4.29	□□□□□ -1.72
TFB1	YDR311W	RAD59	Q12223	238 aa		4.29	□□□□□ -1.72
TFB1	YDR311W	ESS1	P22696	170 aa		4.28	□□□□□ -1.72
TFB1	YDR311W	PAT1	P25644	796 aa	Known RBP	4.28	□□□□□ -1.72
TFB1	YDR311W	PKH3	Q03306	898 aa	Predicted RBP	4.28	□□□□□ -1.72
TFB1	YDR311W	AIM44	Q99299	758 aa		4.28	□□□□□ -1.72
TFB1	YDR311W	MOD5	P07884	428 aa		4.27	□□□□□ -1.73
TFB1	YDR311W	HST2	P53686	357 aa		4.27	□□□□□ -1.73
TFB1	YDR311W	SUP45	P12385	437 aa	Known RBP	4.27	□□□□□ -1.73
TFB1	YDR311W	PUP1	P25043	261 aa		4.27	□□□□□ -1.73
TFB1	YDR311W	YJU3	P28321	313 aa		4.27	□□□□□ -1.73
TFB1	YDR311W	YDJ1	P25491	409 aa	Known RBP	4.26	□□□□□ -1.73
TFB1	YDR311W	CDC3	P32457	520 aa	Known RBP	4.26	□□□□□ -1.73
TFB1	YDR311W	SLD2	P34252	453 aa		4.26	□□□□□ -1.73
TFB1	YDR311W	BDP1	P46678	594 aa		4.26	□□□□□ -1.73
TFB1	YDR311W	CLA4	P48562	842 aa		4.26	□□□□□ -1.73
TFB1	YDR311W	MMP1	Q12372	583 aa		4.26	□□□□□ -1.73
TFB1	YDR311W	CSE4	P36012	229 aa		4.25	□□□□□ -1.73
TFB1	YDR311W	YMR196W	Q04336	1088 aa		4.25	□□□□□ -1.73
TFB1	YDR311W	ENO1	P00924	437 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms