RNA–Protein interactions for RNA: YDR270W

CCC2, Transcript of Cu(+2)-transporting P-type ATPase, yeastyeast

Gene CCC2, Length 3,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC2YDR270W YLL067CQ07888 1374 aa8.47□□□□□ -1.05
CCC2YDR270W YLL066CQ99208 1374 aa8.47□□□□□ -1.05
CCC2YDR270W OXP1P28273 1286 aa8.47□□□□□ -1.05
CCC2YDR270W KIP3P53086 805 aaKnown RBP8.47□□□□□ -1.05
CCC2YDR270W RAD9P14737 1309 aa8.45□□□□□ -1.06
CCC2YDR270W ALD4P46367 519 aaKnown RBP8.45□□□□□ -1.06
CCC2YDR270W TY1B-NL2Q99337 1749 aaKnown RBP8.45□□□□□ -1.06
CCC2YDR270W NST1P53935 1240 aa8.44□□□□□ -1.06
CCC2YDR270W CFT1Q06632 1357 aaKnown RBP8.44□□□□□ -1.06
CCC2YDR270W SPE2P21182 396 aa8.43□□□□□ -1.06
CCC2YDR270W FKH1P40466 484 aa8.43□□□□□ -1.06
CCC2YDR270W RPP0P05317 312 aaKnown RBP8.42□□□□□ -1.06
CCC2YDR270W PSK1P31374 1356 aa8.4□□□□□ -1.07
CCC2YDR270W ORC1P54784 914 aaPredicted RBP8.37□□□□□ -1.07
CCC2YDR270W APC1P53886 1748 aa8.37□□□□□ -1.07
CCC2YDR270W USO1P25386 1790 aa8.37□□□□□ -1.07
CCC2YDR270W LEU3P08638 886 aa8.36□□□□□ -1.07
CCC2YDR270W TAF8Q03750 510 aa8.36□□□□□ -1.07
CCC2YDR270W YEF3P16521 1044 aaKnown RBP8.35□□□□□ -1.07
CCC2YDR270W YLR271WQ06152 274 aa8.34□□□□□ -1.07
CCC2YDR270W RTG3P38165 486 aa8.33□□□□□ -1.08
CCC2YDR270W CAB1Q04430 367 aa8.3□□□□□ -1.08
CCC2YDR270W CDC45Q08032 650 aa8.3□□□□□ -1.08
CCC2YDR270W VPS27P40343 622 aaKnown RBP8.29□□□□□ -1.08
CCC2YDR270W TY4B-HP0C2J7 1802 aa8.29□□□□□ -1.08
CCC2YDR270W TY4B-JP47024 1803 aa8.29□□□□□ -1.08
CCC2YDR270W CHZ1P40019 153 aaPredicted RBP8.29□□□□□ -1.08
CCC2YDR270W YIL177CP40434 1758 aa8.28□□□□□ -1.08
CCC2YDR270W YJL225CP40889 1758 aa8.28□□□□□ -1.08
CCC2YDR270W TRK1P12685 1235 aa8.28□□□□□ -1.08
CCC2YDR270W YRB30P53107 440 aaPredicted RBP8.28□□□□□ -1.08
CCC2YDR270W YRF1-2P40105 1681 aa8.27□□□□□ -1.08
CCC2YDR270W KRE5P22023 1365 aa8.27□□□□□ -1.09
CCC2YDR270W AUS1Q08409 1394 aa8.27□□□□□ -1.09
CCC2YDR270W YAH1Q12184 172 aaKnown RBP8.27□□□□□ -1.09
CCC2YDR270W NAP1P25293 417 aaKnown RBP8.27□□□□□ -1.09
CCC2YDR270W TAP42Q04372 366 aa8.26□□□□□ -1.09
CCC2YDR270W ADE6P38972 1358 aaKnown RBP8.25□□□□□ -1.09
CCC2YDR270W RRP46P53256 223 aaPredicted RBP8.24□□□□□ -1.09
CCC2YDR270W YRF1-4O13559 1382 aa8.24□□□□□ -1.09
CCC2YDR270W RRP5Q05022 1729 aaKnown RBP8.23□□□□□ -1.09
CCC2YDR270W AAD16Q02895 342 aa8.23□□□□□ -1.09
CCC2YDR270W RVB2Q12464 471 aaKnown RBP8.23□□□□□ -1.09
CCC2YDR270W PRP43P53131 767 aaKnown RBP8.23□□□□□ -1.09
CCC2YDR270W PPH3P32345 308 aa8.22□□□□□ -1.09
CCC2YDR270W SIR4P11978 1358 aa8.22□□□□□ -1.09
CCC2YDR270W MAK10Q02197 733 aa8.21□□□□□ -1.1
CCC2YDR270W SUI2P20459 304 aaKnown RBP8.21□□□□□ -1.1
CCC2YDR270W CPS1P27614 576 aa8.21□□□□□ -1.1
CCC2YDR270W YKR023WP36119 530 aaKnown RBP8.2□□□□□ -1.1
CCC2YDR270W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
CCC2YDR270W YDL144CQ07589 356 aa8.19□□□□□ -1.1
CCC2YDR270W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
CCC2YDR270W FKS3Q04952 1785 aa8.18□□□□□ -1.1
CCC2YDR270W URB1P34241 1764 aaKnown RBP8.18□□□□□ -1.1
CCC2YDR270W YNR029CP53729 429 aaKnown RBP8.17□□□□□ -1.1
CCC2YDR270W RCM1P53972 490 aa8.17□□□□□ -1.1
CCC2YDR270W MRX12P47084 519 aa8.17□□□□□ -1.1
CCC2YDR270W RPO41P13433 1351 aaKnown RBP8.16□□□□□ -1.1
CCC2YDR270W MTR4P47047 1073 aaKnown RBP8.16□□□□□ -1.1
CCC2YDR270W TSR3Q12094 313 aaKnown RBP8.16□□□□□ -1.1
CCC2YDR270W MGA2P40578 1113 aa8.16□□□□□ -1.1
CCC2YDR270W RIA1P53893 1110 aa8.16□□□□□ -1.1
CCC2YDR270W HEF3P53978 1044 aaKnown RBP8.16□□□□□ -1.1
CCC2YDR270W GRX4P32642 244 aa8.15□□□□□ -1.11
CCC2YDR270W LEU2P04173 364 aaPredicted RBP8.14□□□□□ -1.11
CCC2YDR270W CST9Q06032 482 aa8.14□□□□□ -1.11
CCC2YDR270W PDI1P17967 522 aaKnown RBP8.13□□□□□ -1.11
CCC2YDR270W FAP1P53971 965 aa8.13□□□□□ -1.11
CCC2YDR270W PRD1P25375 712 aa8.13□□□□□ -1.11
CCC2YDR270W MPP10P47083 593 aaKnown RBP8.13□□□□□ -1.11
CCC2YDR270W THI22Q06490 572 aa8.13□□□□□ -1.11
CCC2YDR270W ABP1P15891 592 aaKnown RBP8.12□□□□□ -1.11
CCC2YDR270W YIR014WP40570 242 aa8.12□□□□□ -1.11
CCC2YDR270W SAP155P43612 1002 aa8.12□□□□□ -1.11
CCC2YDR270W HIM1Q06674 414 aa8.11□□□□□ -1.11
CCC2YDR270W RTR1P40084 226 aaPredicted RBP8.1□□□□□ -1.11
CCC2YDR270W KAR2P16474 682 aaKnown RBP8.09□□□□□ -1.11
CCC2YDR270W YIL092WP40497 633 aa8.08□□□□□ -1.12
CCC2YDR270W RTF1P53064 558 aa8.07□□□□□ -1.12
CCC2YDR270W YIL055CP40523 627 aaKnown RBP8.07□□□□□ -1.12
CCC2YDR270W BUD27P43573 796 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
CCC2YDR270W RSM7P47150 247 aa8.06□□□□□ -1.12
CCC2YDR270W OPY1P38271 328 aa8.05□□□□□ -1.12
CCC2YDR270W DMA2P53924 522 aa8.04□□□□□ -1.12
CCC2YDR270W FUN12P39730 1002 aaKnown RBP8.04□□□□□ -1.12
CCC2YDR270W YMR196WQ04336 1088 aa8.03□□□□□ -1.12
CCC2YDR270W RTT109Q07794 436 aa8.03□□□□□ -1.12
CCC2YDR270W EDE1P34216 1381 aa8.03□□□□□ -1.12
CCC2YDR270W RPC31P17890 251 aa8.03□□□□□ -1.12
CCC2YDR270W TPD3P31383 635 aa8.02□□□□□ -1.13
CCC2YDR270W IME2P32581 645 aa8.02□□□□□ -1.13
CCC2YDR270W LYS2P07702 1392 aa8□□□□□ -1.13
CCC2YDR270W RAD2P07276 1031 aa8□□□□□ -1.13
CCC2YDR270W RPS24AP0CX31 135 aaKnown RBP8□□□□□ -1.13
CCC2YDR270W RPS24BP0CX32 135 aaKnown RBP8□□□□□ -1.13
CCC2YDR270W YNL050CP53952 270 aa8□□□□□ -1.13
CCC2YDR270W YFR016CP43597 1233 aaKnown RBP8□□□□□ -1.13
CCC2YDR270W YRF1-3P0CX14 1859 aa7.99□□□□□ -1.13
CCC2YDR270W YRF1-7P0CX15 1859 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms