RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C TY1A-HP0C2I4 478 aaKnown RBP3.48□□□□□ -1.85
SWI5YDR146C TY1A-AP0CX57 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-PR1P0CX58 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-ORP0CX59 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-PR2P0CX60 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-DR5P0CX65 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-ER2P0CX66 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-GR3P0CX67 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-LR1P0CX68 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-MR2P0CX69 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-JR2P47099 440 aa3.48□□□□□ -1.85
SWI5YDR146C CSN12P47130 423 aa3.48□□□□□ -1.85
SWI5YDR146C ISM1P48526 1002 aa3.48□□□□□ -1.85
SWI5YDR146C RTF1P53064 558 aa3.48□□□□□ -1.85
SWI5YDR146C DMA2P53924 522 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-DR1Q03856 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-ML1Q04706 440 aaKnown RBP3.48□□□□□ -1.85
SWI5YDR146C TY1A-BRQ12217 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-NL2Q12470 440 aa3.48□□□□□ -1.85
SWI5YDR146C TY1A-GR2Q12485 440 aa3.48□□□□□ -1.85
SWI5YDR146C DPS1P04802 557 aaKnown RBP3.47□□□□□ -1.85
SWI5YDR146C SSA2P10592 639 aaKnown RBP3.46□□□□□ -1.86
SWI5YDR146C SEC2P17065 759 aa3.46□□□□□ -1.86
SWI5YDR146C XDJ1P39102 459 aa3.46□□□□□ -1.86
SWI5YDR146C PTC2P39966 464 aaKnown RBP3.46□□□□□ -1.86
SWI5YDR146C ERF2Q06551 359 aa3.46□□□□□ -1.86
SWI5YDR146C BUD20Q08004 166 aaPredicted RBP3.46□□□□□ -1.86
SWI5YDR146C TYW1Q08960 810 aaKnown RBP3.46□□□□□ -1.86
SWI5YDR146C KEX2P13134 814 aa3.46□□□□□ -1.86
SWI5YDR146C SCJ1P25303 377 aa3.46□□□□□ -1.86
SWI5YDR146C GLN1P32288 370 aaKnown RBP3.46□□□□□ -1.86
SWI5YDR146C YNL115CP53925 644 aa3.46□□□□□ -1.86
SWI5YDR146C AGE1Q04412 482 aa3.46□□□□□ -1.86
SWI5YDR146C TAF7Q05021 590 aa3.46□□□□□ -1.86
SWI5YDR146C TFB3Q03290 321 aa3.45□□□□□ -1.86
SWI5YDR146C YMR196WQ04336 1088 aa3.45□□□□□ -1.86
SWI5YDR146C MMP1Q12372 583 aa3.45□□□□□ -1.86
SWI5YDR146C RSC30P38781 883 aa3.44□□□□□ -1.86
SWI5YDR146C ESS1P22696 170 aa3.44□□□□□ -1.86
SWI5YDR146C YJU3P28321 313 aa3.44□□□□□ -1.86
SWI5YDR146C VRP1P37370 817 aa3.44□□□□□ -1.86
SWI5YDR146C PKC1P24583 1151 aa3.43□□□□□ -1.86
SWI5YDR146C PRT1P06103 763 aaKnown RBP3.42□□□□□ -1.86
SWI5YDR146C SLY41P22215 453 aa3.42□□□□□ -1.86
SWI5YDR146C NPL4P33755 580 aa3.42□□□□□ -1.86
SWI5YDR146C PKH3Q03306 898 aaPredicted RBP3.42□□□□□ -1.86
SWI5YDR146C RAD59Q12223 238 aa3.42□□□□□ -1.86
SWI5YDR146C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SWI5YDR146C TUB4P53378 473 aa3.41□□□□□ -1.86
SWI5YDR146C TRM1P15565 570 aaKnown RBP3.41□□□□□ -1.86
SWI5YDR146C BRL1P38770 471 aa3.41□□□□□ -1.86
SWI5YDR146C LAM6Q08001 693 aa3.41□□□□□ -1.86
SWI5YDR146C SDH2P21801 266 aa3.4□□□□□ -1.86
SWI5YDR146C GCD11P32481 527 aaKnown RBP3.4□□□□□ -1.86
SWI5YDR146C PAC1P39946 494 aaKnown RBP3.4□□□□□ -1.86
SWI5YDR146C PUS6P53294 404 aa3.4□□□□□ -1.87
SWI5YDR146C SAS4Q04003 481 aa3.39□□□□□ -1.87
SWI5YDR146C BIO2P32451 375 aa3.38□□□□□ -1.87
SWI5YDR146C HGH1P48362 394 aaKnown RBP3.38□□□□□ -1.87
SWI5YDR146C MOD5P07884 428 aa3.38□□□□□ -1.87
SWI5YDR146C MAK16P10962 306 aaPredicted RBP3.38□□□□□ -1.87
SWI5YDR146C CSE4P36012 229 aa3.38□□□□□ -1.87
SWI5YDR146C RRN7P40992 514 aa3.38□□□□□ -1.87
SWI5YDR146C RPA14P50106 137 aa3.38□□□□□ -1.87
SWI5YDR146C ARG8P18544 423 aa3.37□□□□□ -1.87
SWI5YDR146C TPD3P31383 635 aa3.37□□□□□ -1.87
SWI5YDR146C YDL206WQ12424 762 aa3.37□□□□□ -1.87
SWI5YDR146C PDC1P06169 563 aaKnown RBP3.37□□□□□ -1.87
SWI5YDR146C YPR097WQ06839 1073 aa3.37□□□□□ -1.87
SWI5YDR146C YBL036CP38197 257 aa3.36□□□□□ -1.87
SWI5YDR146C GYP1Q08484 637 aa3.36□□□□□ -1.87
SWI5YDR146C SPT5P27692 1063 aaKnown RBP3.35□□□□□ -1.87
SWI5YDR146C BIM1P40013 344 aa3.35□□□□□ -1.87
SWI5YDR146C ATG32P40458 529 aa3.35□□□□□ -1.87
SWI5YDR146C TBF1Q02457 562 aa3.35□□□□□ -1.87
SWI5YDR146C SUP45P12385 437 aaKnown RBP3.35□□□□□ -1.87
SWI5YDR146C NAF1P53919 492 aaKnown RBP3.35□□□□□ -1.87
SWI5YDR146C RLF2Q12495 606 aa3.35□□□□□ -1.87
SWI5YDR146C RRD1P40454 393 aaKnown RBP3.34□□□□□ -1.87
SWI5YDR146C HXT10P43581 546 aa3.34□□□□□ -1.87
SWI5YDR146C YJL007CP47080 104 aa3.34□□□□□ -1.87
SWI5YDR146C SPT16P32558 1035 aaKnown RBP3.34□□□□□ -1.88
SWI5YDR146C YPR084WQ06821 456 aa3.34□□□□□ -1.88
SWI5YDR146C ALR1Q08269 859 aa3.34□□□□□ -1.88
SWI5YDR146C TIF1P10081 395 aaKnown RBP3.33□□□□□ -1.88
SWI5YDR146C PAT1P25644 796 aaKnown RBP3.33□□□□□ -1.88
SWI5YDR146C CST6P40535 587 aa3.33□□□□□ -1.88
SWI5YDR146C YDJ1P25491 409 aaKnown RBP3.32□□□□□ -1.88
SWI5YDR146C MRF1P30775 413 aaPredicted RBP3.32□□□□□ -1.88
SWI5YDR146C KXD1P53158 218 aa3.32□□□□□ -1.88
SWI5YDR146C ERG12P07277 443 aa3.32□□□□□ -1.88
SWI5YDR146C FIG4P42837 879 aa3.32□□□□□ -1.88
SWI5YDR146C RIM21P48565 533 aa3.32□□□□□ -1.88
SWI5YDR146C ENO2P00925 437 aaKnown RBP3.31□□□□□ -1.88
SWI5YDR146C VAC17P25591 423 aa3.31□□□□□ -1.88
SWI5YDR146C YNL108CP53929 270 aa3.31□□□□□ -1.88
SWI5YDR146C MRX10Q05648 414 aa3.31□□□□□ -1.88
SWI5YDR146C MCM16Q12262 181 aa3.31□□□□□ -1.88
SWI5YDR146C BDP1P46678 594 aa3.31□□□□□ -1.88
SWI5YDR146C APL6P46682 809 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms