RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W PAT1P25644 796 aaKnown RBP6.28□□□□□ -1.4
TSR1YDL060W MRF1P30775 413 aaPredicted RBP6.27□□□□□ -1.41
TSR1YDL060W SPT16P32558 1035 aaKnown RBP6.26□□□□□ -1.41
TSR1YDL060W AIM7Q12156 149 aa6.26□□□□□ -1.41
TSR1YDL060W KEX2P13134 814 aa6.26□□□□□ -1.41
TSR1YDL060W NIS1P53939 407 aa6.24□□□□□ -1.41
TSR1YDL060W YNL115CP53925 644 aa6.24□□□□□ -1.41
TSR1YDL060W DPS1P04802 557 aaKnown RBP6.23□□□□□ -1.41
TSR1YDL060W RTF1P53064 558 aa6.23□□□□□ -1.41
TSR1YDL060W ERG12P07277 443 aa6.23□□□□□ -1.41
TSR1YDL060W FPK1P53739 893 aa6.22□□□□□ -1.41
TSR1YDL060W YEL077CQ3E7X8 1277 aa6.22□□□□□ -1.41
TSR1YDL060W SIT4P20604 311 aa6.21□□□□□ -1.42
TSR1YDL060W RRN7P40992 514 aa6.21□□□□□ -1.42
TSR1YDL060W ERF2Q06551 359 aa6.21□□□□□ -1.42
TSR1YDL060W KIN1P13185 1064 aa6.21□□□□□ -1.42
TSR1YDL060W SLY41P22215 453 aa6.21□□□□□ -1.42
TSR1YDL060W TY1A-DR4O74302 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-HP0C2I4 478 aaKnown RBP6.2□□□□□ -1.42
TSR1YDL060W TY1A-AP0CX57 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-PR1P0CX58 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-ORP0CX59 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-PR2P0CX60 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-DR5P0CX65 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-ER2P0CX66 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-GR3P0CX67 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-LR1P0CX68 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-MR2P0CX69 440 aa6.2□□□□□ -1.42
TSR1YDL060W SEC2P17065 759 aa6.2□□□□□ -1.42
TSR1YDL060W GLN1P32288 370 aaKnown RBP6.2□□□□□ -1.42
TSR1YDL060W TY1A-JR2P47099 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-DR1Q03856 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-ML1Q04706 440 aaKnown RBP6.2□□□□□ -1.42
TSR1YDL060W TY1A-BRQ12217 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-NL2Q12470 440 aa6.2□□□□□ -1.42
TSR1YDL060W TY1A-GR2Q12485 440 aa6.2□□□□□ -1.42
TSR1YDL060W MMP1Q12372 583 aa6.19□□□□□ -1.42
TSR1YDL060W HST2P53686 357 aa6.17□□□□□ -1.42
TSR1YDL060W CSN12P47130 423 aa6.17□□□□□ -1.42
TSR1YDL060W AMS1P22855 1083 aa6.16□□□□□ -1.42
TSR1YDL060W SCJ1P25303 377 aa6.16□□□□□ -1.42
TSR1YDL060W TBF1Q02457 562 aa6.16□□□□□ -1.42
TSR1YDL060W TUB4P53378 473 aa6.15□□□□□ -1.43
TSR1YDL060W TYW1Q08960 810 aaKnown RBP6.15□□□□□ -1.43
TSR1YDL060W PUS6P53294 404 aa6.14□□□□□ -1.43
TSR1YDL060W ESS1P22696 170 aa6.13□□□□□ -1.43
TSR1YDL060W RAS1P01119 309 aa6.13□□□□□ -1.43
TSR1YDL060W SSA2P10592 639 aaKnown RBP6.13□□□□□ -1.43
TSR1YDL060W KXD1P53158 218 aa6.12□□□□□ -1.43
TSR1YDL060W PAC1P39946 494 aaKnown RBP6.11□□□□□ -1.43
TSR1YDL060W SDH2P21801 266 aa6.11□□□□□ -1.43
TSR1YDL060W FRK1Q03002 865 aaPredicted RBP6.11□□□□□ -1.43
TSR1YDL060W PKH3Q03306 898 aaPredicted RBP6.11□□□□□ -1.43
TSR1YDL060W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
TSR1YDL060W AGE1Q04412 482 aa6.09□□□□□ -1.43
TSR1YDL060W ARG8P18544 423 aa6.09□□□□□ -1.43
TSR1YDL060W LAM6Q08001 693 aa6.09□□□□□ -1.43
TSR1YDL060W TRM1P15565 570 aaKnown RBP6.08□□□□□ -1.44
TSR1YDL060W ALR1Q08269 859 aa6.08□□□□□ -1.44
TSR1YDL060W YJU3P28321 313 aa6.07□□□□□ -1.44
TSR1YDL060W CST6P40535 587 aa6.07□□□□□ -1.44
TSR1YDL060W BDP1P46678 594 aa6.07□□□□□ -1.44
TSR1YDL060W YDL206WQ12424 762 aa6.07□□□□□ -1.44
TSR1YDL060W KTR1P27810 393 aaKnown RBP6.06□□□□□ -1.44
TSR1YDL060W GUA1P38625 525 aaKnown RBP6.06□□□□□ -1.44
TSR1YDL060W RPA14P50106 137 aa6.06□□□□□ -1.44
TSR1YDL060W HXT10P43581 546 aa6.04□□□□□ -1.44
TSR1YDL060W BRL1P38770 471 aa6.03□□□□□ -1.44
TSR1YDL060W HGH1P48362 394 aaKnown RBP6.03□□□□□ -1.44
TSR1YDL060W PDC1P06169 563 aaKnown RBP6.03□□□□□ -1.44
TSR1YDL060W RAD59Q12223 238 aa6.03□□□□□ -1.44
TSR1YDL060W YPR097WQ06839 1073 aa6.02□□□□□ -1.45
TSR1YDL060W MOD5P07884 428 aa6.02□□□□□ -1.45
TSR1YDL060W HPC2Q01448 625 aa6.01□□□□□ -1.45
TSR1YDL060W PUS5Q06244 254 aa6.01□□□□□ -1.45
TSR1YDL060W TRK1P12685 1235 aa6□□□□□ -1.45
TSR1YDL060W KIP2P28743 706 aa6□□□□□ -1.45
TSR1YDL060W HED1Q03937 162 aa6□□□□□ -1.45
TSR1YDL060W TPD3P31383 635 aa6□□□□□ -1.45
TSR1YDL060W RSC30P38781 883 aa5.99□□□□□ -1.45
TSR1YDL060W RRD1P40454 393 aaKnown RBP5.99□□□□□ -1.45
TSR1YDL060W SYH1Q02875 849 aaKnown RBP5.99□□□□□ -1.45
TSR1YDL060W IXR1P33417 597 aa5.96□□□□□ -1.45
TSR1YDL060W TFB3Q03290 321 aa5.96□□□□□ -1.45
TSR1YDL060W CDC4P07834 779 aa5.96□□□□□ -1.46
TSR1YDL060W YBL036CP38197 257 aa5.96□□□□□ -1.46
TSR1YDL060W CLA4P48562 842 aa5.95□□□□□ -1.46
TSR1YDL060W AIR1P40507 360 aaKnown RBP5.94□□□□□ -1.46
TSR1YDL060W HST3P53687 447 aa5.94□□□□□ -1.46
TSR1YDL060W DMA2P53924 522 aa5.94□□□□□ -1.46
TSR1YDL060W GCR2Q01722 534 aa5.94□□□□□ -1.46
TSR1YDL060W SRC1Q03707 834 aa5.94□□□□□ -1.46
TSR1YDL060W CSE4P36012 229 aa5.93□□□□□ -1.46
TSR1YDL060W MAK16P10962 306 aaPredicted RBP5.91□□□□□ -1.46
TSR1YDL060W ASH1P34233 588 aa5.9□□□□□ -1.46
TSR1YDL060W PKC1P24583 1151 aa5.89□□□□□ -1.47
TSR1YDL060W VAC17P25591 423 aa5.89□□□□□ -1.47
TSR1YDL060W TEC1P18412 486 aa5.89□□□□□ -1.47
TSR1YDL060W BRE2P43132 505 aa5.88□□□□□ -1.47
TSR1YDL060W MET32Q12041 191 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms