RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C ABP1P15891 592 aaKnown RBP7.42□□□□□ -1.22
PAT1YCR077C RLP24Q07915 199 aaKnown RBP7.42□□□□□ -1.22
PAT1YCR077C DRS2P39524 1355 aa7.42□□□□□ -1.22
PAT1YCR077C SPT2P06843 333 aaPredicted RBP7.41□□□□□ -1.22
PAT1YCR077C SNF7P39929 240 aaKnown RBP7.41□□□□□ -1.22
PAT1YCR077C RAV1P47104 1357 aa7.41□□□□□ -1.22
PAT1YCR077C RTC1Q08281 1341 aa7.41□□□□□ -1.22
PAT1YCR077C CHC1P22137 1653 aaKnown RBP7.4□□□□□ -1.22
PAT1YCR077C RNA1P11745 407 aaKnown RBP7.4□□□□□ -1.22
PAT1YCR077C RLF2Q12495 606 aa7.4□□□□□ -1.22
PAT1YCR077C QCR6P00127 147 aa7.39□□□□□ -1.23
PAT1YCR077C DOP1Q03921 1698 aa7.39□□□□□ -1.23
PAT1YCR077C FPR4Q06205 392 aaPredicted RBP7.39□□□□□ -1.23
PAT1YCR077C DNF2Q12675 1612 aa7.39□□□□□ -1.23
PAT1YCR077C SEC7P11075 2009 aaKnown RBP7.37□□□□□ -1.23
PAT1YCR077C PDR11P40550 1411 aa7.37□□□□□ -1.23
PAT1YCR077C TAF5P38129 798 aa7.37□□□□□ -1.23
PAT1YCR077C BNR1P40450 1375 aa7.36□□□□□ -1.23
PAT1YCR077C KIP3P53086 805 aaKnown RBP7.35□□□□□ -1.23
PAT1YCR077C ROX1P25042 368 aa7.35□□□□□ -1.23
PAT1YCR077C NUP192P47054 1683 aa7.34□□□□□ -1.23
PAT1YCR077C MLP1Q02455 1875 aaKnown RBP7.33□□□□□ -1.24
PAT1YCR077C ESL2P36168 1195 aa7.33□□□□□ -1.24
PAT1YCR077C VMR1P38735 1592 aa7.33□□□□□ -1.24
PAT1YCR077C SUI2P20459 304 aaKnown RBP7.32□□□□□ -1.24
PAT1YCR077C YDL144CQ07589 356 aa7.32□□□□□ -1.24
PAT1YCR077C SNF2P22082 1703 aa7.3□□□□□ -1.24
PAT1YCR077C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
PAT1YCR077C PCT1P13259 424 aa7.29□□□□□ -1.24
PAT1YCR077C SCT1P32784 759 aa7.29□□□□□ -1.24
PAT1YCR077C SLN1P39928 1220 aaPredicted RBP7.28□□□□□ -1.24
PAT1YCR077C RTG3P38165 486 aa7.28□□□□□ -1.24
PAT1YCR077C GRX3Q03835 250 aa7.28□□□□□ -1.24
PAT1YCR077C SPC110P32380 944 aa7.27□□□□□ -1.24
PAT1YCR077C IML1P47170 1584 aa7.27□□□□□ -1.25
PAT1YCR077C YEF3P16521 1044 aaKnown RBP7.27□□□□□ -1.25
PAT1YCR077C SNU71P53207 620 aaKnown RBP7.27□□□□□ -1.25
PAT1YCR077C TRK1P12685 1235 aa7.26□□□□□ -1.25
PAT1YCR077C SPE2P21182 396 aa7.26□□□□□ -1.25
PAT1YCR077C HAP1P0CE41 1502 aa7.25□□□□□ -1.25
PAT1YCR077C EDE1P34216 1381 aa7.25□□□□□ -1.25
PAT1YCR077C HSP82P02829 709 aaKnown RBP7.25□□□□□ -1.25
PAT1YCR077C DJP1P40564 432 aa7.25□□□□□ -1.25
PAT1YCR077C TRM3Q07527 1436 aa7.25□□□□□ -1.25
PAT1YCR077C FKH1P40466 484 aa7.25□□□□□ -1.25
PAT1YCR077C NMD2P38798 1089 aaKnown RBP7.24□□□□□ -1.25
PAT1YCR077C MPP10P47083 593 aaKnown RBP7.24□□□□□ -1.25
PAT1YCR077C YNL011CP53980 444 aa7.24□□□□□ -1.25
PAT1YCR077C NUP188P52593 1655 aaKnown RBP7.24□□□□□ -1.25
PAT1YCR077C RPN1P38764 993 aaKnown RBP7.24□□□□□ -1.25
PAT1YCR077C MSP1P28737 362 aa7.23□□□□□ -1.25
PAT1YCR077C SWE1P32944 819 aa7.23□□□□□ -1.25
PAT1YCR077C VPS24P36095 224 aaKnown RBP7.23□□□□□ -1.25
PAT1YCR077C RIX1P38883 763 aaPredicted RBP7.23□□□□□ -1.25
PAT1YCR077C MDG1P53885 366 aa7.22□□□□□ -1.25
PAT1YCR077C PLP2Q12017 286 aa7.22□□□□□ -1.25
PAT1YCR077C NOT3P06102 836 aaKnown RBP7.22□□□□□ -1.25
PAT1YCR077C LSP1Q12230 341 aaKnown RBP7.21□□□□□ -1.26
PAT1YCR077C RAD2P07276 1031 aa7.2□□□□□ -1.26
PAT1YCR077C TYS1P36421 394 aaKnown RBP7.2□□□□□ -1.26
PAT1YCR077C DOS2P54858 310 aa7.2□□□□□ -1.26
PAT1YCR077C ETT1Q08421 412 aaKnown RBP7.2□□□□□ -1.26
PAT1YCR077C YAP3P38749 330 aa7.19□□□□□ -1.26
PAT1YCR077C YIL092WP40497 633 aa7.19□□□□□ -1.26
PAT1YCR077C SAP155P43612 1002 aa7.19□□□□□ -1.26
PAT1YCR077C RRP46P53256 223 aaPredicted RBP7.19□□□□□ -1.26
PAT1YCR077C KNS1P32350 737 aaPredicted RBP7.19□□□□□ -1.26
PAT1YCR077C TIF4632P39936 914 aaKnown RBP7.18□□□□□ -1.26
PAT1YCR077C POL32P47110 350 aa7.18□□□□□ -1.26
PAT1YCR077C RAD26P40352 1085 aa7.18□□□□□ -1.26
PAT1YCR077C TOP1P04786 769 aa7.17□□□□□ -1.26
PAT1YCR077C ARL1P38116 183 aaKnown RBP7.17□□□□□ -1.26
PAT1YCR077C BUD27P43573 796 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
PAT1YCR077C PIL1P53252 339 aaKnown RBP7.17□□□□□ -1.26
PAT1YCR077C CTR9P89105 1077 aa7.17□□□□□ -1.26
PAT1YCR077C KRE5P22023 1365 aa7.17□□□□□ -1.26
PAT1YCR077C CHZ1P40019 153 aaPredicted RBP7.17□□□□□ -1.26
PAT1YCR077C VPS4P52917 437 aa7.17□□□□□ -1.26
PAT1YCR077C DNF3Q12674 1656 aa7.16□□□□□ -1.26
PAT1YCR077C YML133CQ03099 1374 aa7.15□□□□□ -1.26
PAT1YCR077C YLL067CQ07888 1374 aa7.15□□□□□ -1.26
PAT1YCR077C YLL066CQ99208 1374 aa7.15□□□□□ -1.26
PAT1YCR077C RTR1P40084 226 aaPredicted RBP7.15□□□□□ -1.26
PAT1YCR077C TEA1P47988 759 aa7.15□□□□□ -1.26
PAT1YCR077C DAL5P15365 543 aa7.15□□□□□ -1.27
PAT1YCR077C RAD9P14737 1309 aa7.14□□□□□ -1.27
PAT1YCR077C YRF1-4O13559 1382 aa7.14□□□□□ -1.27
PAT1YCR077C BCK1Q01389 1478 aa7.14□□□□□ -1.27
PAT1YCR077C MSH3P25336 1018 aa7.14□□□□□ -1.27
PAT1YCR077C HEF3P53978 1044 aaKnown RBP7.13□□□□□ -1.27
PAT1YCR077C TAF8Q03750 510 aa7.13□□□□□ -1.27
PAT1YCR077C THI22Q06490 572 aa7.13□□□□□ -1.27
PAT1YCR077C TPD3P31383 635 aa7.13□□□□□ -1.27
PAT1YCR077C SIR4P11978 1358 aa7.13□□□□□ -1.27
PAT1YCR077C NNF2P53253 936 aa7.12□□□□□ -1.27
PAT1YCR077C ECM16Q04217 1267 aaKnown RBP7.12□□□□□ -1.27
PAT1YCR077C RPS0AP32905 252 aaKnown RBP7.11□□□□□ -1.27
PAT1YCR077C SIC1P38634 284 aa7.11□□□□□ -1.27
PAT1YCR077C IPL1P38991 367 aa7.11□□□□□ -1.27
PAT1YCR077C CAB1Q04430 367 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms