RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeastyeast

Gene TSC10, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC10YBR265W SPE2P21182 396 aa13.26□□□□□ -0.29
TSC10YBR265W ISW2Q08773 1120 aa13.26□□□□□ -0.29
TSC10YBR265W SCT1P32784 759 aa13.24□□□□□ -0.29
TSC10YBR265W REB1P21538 810 aa13.22□□□□□ -0.29
TSC10YBR265W PPH3P32345 308 aa13.19□□□□□ -0.3
TSC10YBR265W ENT1Q12518 454 aa13.19□□□□□ -0.3
TSC10YBR265W RRP5Q05022 1729 aaKnown RBP13.19□□□□□ -0.3
TSC10YBR265W PSK1P31374 1356 aa13.19□□□□□ -0.3
TSC10YBR265W YIL055CP40523 627 aaKnown RBP13.18□□□□□ -0.3
TSC10YBR265W YLR419WQ06698 1435 aaKnown RBP13.16□□□□□ -0.3
TSC10YBR265W PRP45P28004 379 aaPredicted RBP13.16□□□□□ -0.3
TSC10YBR265W ORC1P54784 914 aaPredicted RBP13.16□□□□□ -0.3
TSC10YBR265W YRF1-2P40105 1681 aa13.15□□□□□ -0.31
TSC10YBR265W TY4B-HP0C2J7 1802 aa13.14□□□□□ -0.31
TSC10YBR265W TY4B-JP47024 1803 aa13.14□□□□□ -0.31
TSC10YBR265W CHZ1P40019 153 aaPredicted RBP13.14□□□□□ -0.31
TSC10YBR265W ENV9Q08651 330 aa13.13□□□□□ -0.31
TSC10YBR265W ADE6P38972 1358 aaKnown RBP13.11□□□□□ -0.31
TSC10YBR265W GLN1P32288 370 aaKnown RBP13.1□□□□□ -0.31
TSC10YBR265W PRP5P21372 849 aaPredicted RBP13.09□□□□□ -0.31
TSC10YBR265W IMH1Q06704 911 aaKnown RBP13.09□□□□□ -0.31
TSC10YBR265W LEU2P04173 364 aaPredicted RBP13.08□□□□□ -0.32
TSC10YBR265W MTR4P47047 1073 aaKnown RBP13.07□□□□□ -0.32
TSC10YBR265W PRI1P10363 409 aa13.06□□□□□ -0.32
TSC10YBR265W RPG1P38249 964 aaKnown RBP13.04□□□□□ -0.32
TSC10YBR265W CSE4P36012 229 aa13.02□□□□□ -0.33
TSC10YBR265W YMR074CQ04773 145 aa13.01□□□□□ -0.33
TSC10YBR265W PRP43P53131 767 aaKnown RBP13□□□□□ -0.33
TSC10YBR265W POL5P39985 1022 aaKnown RBP12.99□□□□□ -0.33
TSC10YBR265W MSB3P48566 633 aaPredicted RBP12.99□□□□□ -0.33
TSC10YBR265W MLP1Q02455 1875 aaKnown RBP12.97□□□□□ -0.33
TSC10YBR265W LEU3P08638 886 aa12.97□□□□□ -0.33
TSC10YBR265W RPS24AP0CX31 135 aaKnown RBP12.97□□□□□ -0.33
TSC10YBR265W RPS24BP0CX32 135 aaKnown RBP12.97□□□□□ -0.33
TSC10YBR265W TCB1Q12466 1186 aa12.96□□□□□ -0.33
TSC10YBR265W YML133CQ03099 1374 aa12.94□□□□□ -0.34
TSC10YBR265W YLL067CQ07888 1374 aa12.94□□□□□ -0.34
TSC10YBR265W YLL066CQ99208 1374 aa12.94□□□□□ -0.34
TSC10YBR265W SLM3Q12093 417 aa12.93□□□□□ -0.34
TSC10YBR265W RSF2P46974 1380 aa12.93□□□□□ -0.34
TSC10YBR265W FKH1P40466 484 aa12.92□□□□□ -0.34
TSC10YBR265W IES2P40154 320 aa12.91□□□□□ -0.34
TSC10YBR265W URB1P34241 1764 aaKnown RBP12.91□□□□□ -0.34
TSC10YBR265W MHP1P43638 1398 aa12.91□□□□□ -0.34
TSC10YBR265W PDI1P17967 522 aaKnown RBP12.9□□□□□ -0.34
TSC10YBR265W ENP1P38333 483 aaKnown RBP12.9□□□□□ -0.34
TSC10YBR265W RTF1P53064 558 aa12.9□□□□□ -0.34
TSC10YBR265W ROM2P51862 1356 aaKnown RBP12.87□□□□□ -0.35
TSC10YBR265W RTG3P38165 486 aa12.87□□□□□ -0.35
TSC10YBR265W UBP1P25037 809 aa12.85□□□□□ -0.35
TSC10YBR265W DPS1P04802 557 aaKnown RBP12.84□□□□□ -0.35
TSC10YBR265W BUD31P25337 157 aaPredicted RBP12.84□□□□□ -0.35
TSC10YBR265W PDS5Q04264 1277 aa12.84□□□□□ -0.35
TSC10YBR265W YIL177CP40434 1758 aa12.84□□□□□ -0.35
TSC10YBR265W YJL225CP40889 1758 aa12.84□□□□□ -0.35
TSC10YBR265W FKS3Q04952 1785 aa12.84□□□□□ -0.35
TSC10YBR265W XKS1P42826 600 aa12.83□□□□□ -0.36
TSC10YBR265W GAS4Q08271 471 aa12.83□□□□□ -0.36
TSC10YBR265W AAD16Q02895 342 aa12.82□□□□□ -0.36
TSC10YBR265W EDE1P34216 1381 aa12.81□□□□□ -0.36
TSC10YBR265W YEF3P16521 1044 aaKnown RBP12.81□□□□□ -0.36
TSC10YBR265W GRX4P32642 244 aa12.81□□□□□ -0.36
TSC10YBR265W DOT5P40553 215 aa12.81□□□□□ -0.36
TSC10YBR265W TAP42Q04372 366 aa12.81□□□□□ -0.36
TSC10YBR265W APC1P53886 1748 aa12.81□□□□□ -0.36
TSC10YBR265W YRF1-3P0CX14 1859 aa12.8□□□□□ -0.36
TSC10YBR265W YRF1-7P0CX15 1859 aa12.8□□□□□ -0.36
TSC10YBR265W YRF1-6P53819 1859 aa12.8□□□□□ -0.36
TSC10YBR265W YKL133CP36066 463 aa12.79□□□□□ -0.36
TSC10YBR265W RPN11P43588 306 aaKnown RBP12.78□□□□□ -0.36
TSC10YBR265W YJL181WP46987 611 aa12.78□□□□□ -0.36
TSC10YBR265W FOX2Q02207 900 aaKnown RBP12.76□□□□□ -0.37
TSC10YBR265W LAM6Q08001 693 aa12.76□□□□□ -0.37
TSC10YBR265W SEC3P33332 1336 aaKnown RBP12.76□□□□□ -0.37
TSC10YBR265W PRP40P33203 583 aaKnown RBP12.74□□□□□ -0.37
TSC10YBR265W MEC3Q02574 474 aa12.74□□□□□ -0.37
TSC10YBR265W AUS1Q08409 1394 aa12.73□□□□□ -0.37
TSC10YBR265W KAR2P16474 682 aaKnown RBP12.72□□□□□ -0.37
TSC10YBR265W SIR4P11978 1358 aa12.71□□□□□ -0.37
TSC10YBR265W HIM1Q06674 414 aa12.7□□□□□ -0.38
TSC10YBR265W YRF1-4O13559 1382 aa12.69□□□□□ -0.38
TSC10YBR265W COBP00163 385 aa12.69□□□□□ -0.38
TSC10YBR265W SNF2P22082 1703 aa12.68□□□□□ -0.38
TSC10YBR265W RCR1P38212 213 aa12.68□□□□□ -0.38
TSC10YBR265W RPO41P13433 1351 aaKnown RBP12.66□□□□□ -0.38
TSC10YBR265W RPL17AP05740 184 aaKnown RBP12.65□□□□□ -0.38
TSC10YBR265W RPL17BP46990 184 aaKnown RBP12.65□□□□□ -0.38
TSC10YBR265W FRK1Q03002 865 aaPredicted RBP12.65□□□□□ -0.38
TSC10YBR265W YKR075CP36155 307 aa12.64□□□□□ -0.39
TSC10YBR265W NPR2P39923 615 aa12.64□□□□□ -0.39
TSC10YBR265W GTT3P39996 337 aa12.64□□□□□ -0.39
TSC10YBR265W YBL086CP38177 466 aa12.63□□□□□ -0.39
TSC10YBR265W PAP2P53632 584 aaKnown RBP12.63□□□□□ -0.39
TSC10YBR265W UGA2P38067 497 aa12.62□□□□□ -0.39
TSC10YBR265W ALD2P47771 506 aa12.62□□□□□ -0.39
TSC10YBR265W ADE16P54113 591 aaKnown RBP12.62□□□□□ -0.39
TSC10YBR265W ATG13Q06628 738 aa12.62□□□□□ -0.39
TSC10YBR265W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.6□□□□□ -0.39not detected
TSC10YBR265W LYS4P49367 693 aaPredicted RBP12.6□□□□□ -0.39
TSC10YBR265W SSA2P10592 639 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms