RNA–Protein interactions for RNA: YBL101C

ECM21, Transcript of Protein involved in regulating endocytosis of plasma membrane proteins, yeastyeast

Gene ECM21, Length 3,354 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM21YBL101C RAD9P14737 1309 aa4.19□□□□□ -1.74
ECM21YBL101C PTP3P40048 928 aa4.18□□□□□ -1.74
ECM21YBL101C PRP43P53131 767 aaKnown RBP4.18□□□□□ -1.74
ECM21YBL101C UTP10P42945 1769 aaKnown RBP4.18□□□□□ -1.74
ECM21YBL101C LEU3P08638 886 aa4.17□□□□□ -1.74
ECM21YBL101C IOC4Q04213 475 aa4.17□□□□□ -1.74
ECM21YBL101C YNR029CP53729 429 aaKnown RBP4.17□□□□□ -1.74
ECM21YBL101C EDE1P34216 1381 aa4.17□□□□□ -1.74
ECM21YBL101C YAH1Q12184 172 aaKnown RBP4.16□□□□□ -1.74
ECM21YBL101C KRE5P22023 1365 aa4.16□□□□□ -1.74
ECM21YBL101C ESL2P36168 1195 aa4.14□□□□□ -1.75
ECM21YBL101C PAF1P38351 445 aa4.14□□□□□ -1.75
ECM21YBL101C DMA2P53924 522 aa4.13□□□□□ -1.75
ECM21YBL101C MHP1P43638 1398 aa4.12□□□□□ -1.75
ECM21YBL101C THI12P42883 340 aa4.12□□□□□ -1.75
ECM21YBL101C THI5P43534 340 aa4.12□□□□□ -1.75
ECM21YBL101C THI11P47183 340 aa4.12□□□□□ -1.75
ECM21YBL101C THI13Q07748 340 aa4.12□□□□□ -1.75
ECM21YBL101C CPS1P27614 576 aa4.1□□□□□ -1.75
ECM21YBL101C NOP7P53261 605 aaKnown RBP4.1□□□□□ -1.75
ECM21YBL101C SCT1P32784 759 aa4.08□□□□□ -1.76
ECM21YBL101C AUS1Q08409 1394 aa4.07□□□□□ -1.76
ECM21YBL101C GLN1P32288 370 aaKnown RBP4.07□□□□□ -1.76
ECM21YBL101C SIR4P11978 1358 aa4.07□□□□□ -1.76
ECM21YBL101C RIA1P53893 1110 aa4.07□□□□□ -1.76
ECM21YBL101C FKH1P40466 484 aa4.06□□□□□ -1.76
ECM21YBL101C CAB1Q04430 367 aa4.06□□□□□ -1.76
ECM21YBL101C PPH3P32345 308 aa4.05□□□□□ -1.76
ECM21YBL101C RSF2P46974 1380 aa4.05□□□□□ -1.76
ECM21YBL101C MRX12P47084 519 aa4.05□□□□□ -1.76
ECM21YBL101C YRF1-4O13559 1382 aa4.04□□□□□ -1.76
ECM21YBL101C SPE2P21182 396 aa4.03□□□□□ -1.76
ECM21YBL101C TAF8Q03750 510 aa4.03□□□□□ -1.76
ECM21YBL101C TAP42Q04372 366 aa4.03□□□□□ -1.76
ECM21YBL101C NAP1P25293 417 aaKnown RBP4.03□□□□□ -1.76
ECM21YBL101C ROM2P51862 1356 aaKnown RBP4.02□□□□□ -1.77
ECM21YBL101C TAF5P38129 798 aa4.02□□□□□ -1.77
ECM21YBL101C SSP1P38871 571 aa4.02□□□□□ -1.77
ECM21YBL101C MTR4P47047 1073 aaKnown RBP4.01□□□□□ -1.77
ECM21YBL101C YMR074CQ04773 145 aa4□□□□□ -1.77
ECM21YBL101C SEC3P33332 1336 aaKnown RBP4□□□□□ -1.77
ECM21YBL101C RPO41P13433 1351 aaKnown RBP4□□□□□ -1.77
ECM21YBL101C FIG2P25653 1609 aa3.99□□□□□ -1.77
ECM21YBL101C REB1P21538 810 aa3.99□□□□□ -1.77
ECM21YBL101C YIL055CP40523 627 aaKnown RBP3.99□□□□□ -1.77
ECM21YBL101C RLF2Q12495 606 aa3.99□□□□□ -1.77
ECM21YBL101C LYS2P07702 1392 aa3.99□□□□□ -1.77
ECM21YBL101C RCM1P53972 490 aa3.98□□□□□ -1.77
ECM21YBL101C RPN1P38764 993 aaKnown RBP3.98□□□□□ -1.77
ECM21YBL101C KIP3P53086 805 aaKnown RBP3.98□□□□□ -1.77
ECM21YBL101C RIM101P33400 625 aa3.97□□□□□ -1.77
ECM21YBL101C HKR1P41809 1802 aa3.97□□□□□ -1.77
ECM21YBL101C LEU2P04173 364 aaPredicted RBP3.97□□□□□ -1.77
ECM21YBL101C YEF3P16521 1044 aaKnown RBP3.97□□□□□ -1.77
ECM21YBL101C SLM3Q12093 417 aa3.97□□□□□ -1.77
ECM21YBL101C GTT3P39996 337 aa3.96□□□□□ -1.78
ECM21YBL101C DUR1,2P32528 1835 aaKnown RBP3.96□□□□□ -1.78
ECM21YBL101C GRX4P32642 244 aa3.96□□□□□ -1.78
ECM21YBL101C ORC1P54784 914 aaPredicted RBP3.96□□□□□ -1.78
ECM21YBL101C SPT7P35177 1332 aa3.96□□□□□ -1.78
ECM21YBL101C RPL17AP05740 184 aaKnown RBP3.94□□□□□ -1.78
ECM21YBL101C RPL17BP46990 184 aaKnown RBP3.94□□□□□ -1.78
ECM21YBL101C ENV9Q08651 330 aa3.94□□□□□ -1.78
ECM21YBL101C PRI1P10363 409 aa3.94□□□□□ -1.78
ECM21YBL101C POL5P39985 1022 aaKnown RBP3.94□□□□□ -1.78
ECM21YBL101C PRP5P21372 849 aaPredicted RBP3.94□□□□□ -1.78
ECM21YBL101C ENT1Q12518 454 aa3.93□□□□□ -1.78
ECM21YBL101C CTF4Q01454 927 aa3.93□□□□□ -1.78
ECM21YBL101C SPT21P35209 758 aa3.93□□□□□ -1.78
ECM21YBL101C IMH1Q06704 911 aaKnown RBP3.93□□□□□ -1.78
ECM21YBL101C CHZ1P40019 153 aaPredicted RBP3.92□□□□□ -1.78
ECM21YBL101C NOP2P40991 618 aaKnown RBP3.91□□□□□ -1.78
ECM21YBL101C PDI1P17967 522 aaKnown RBP3.91□□□□□ -1.78
ECM21YBL101C OXP1P28273 1286 aa3.91□□□□□ -1.78
ECM21YBL101C RTG3P38165 486 aa3.91□□□□□ -1.78
ECM21YBL101C PDS5Q04264 1277 aa3.91□□□□□ -1.78
ECM21YBL101C MSB3P48566 633 aaPredicted RBP3.91□□□□□ -1.78
ECM21YBL101C YKR075CP36155 307 aa3.9□□□□□ -1.78
ECM21YBL101C RPP0P05317 312 aaKnown RBP3.9□□□□□ -1.79
ECM21YBL101C NSR1P27476 414 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
ECM21YBL101C IES2P40154 320 aa3.89□□□□□ -1.79
ECM21YBL101C FOX2Q02207 900 aaKnown RBP3.89□□□□□ -1.79
ECM21YBL101C TCB1Q12466 1186 aa3.89□□□□□ -1.79
ECM21YBL101C NUP145P49687 1317 aa3.89□□□□□ -1.79
ECM21YBL101C RRP46P53256 223 aaPredicted RBP3.89□□□□□ -1.79
ECM21YBL101C YLR271WQ06152 274 aa3.89□□□□□ -1.79
ECM21YBL101C YFR016CP43597 1233 aaKnown RBP3.88□□□□□ -1.79
ECM21YBL101C APP1P53933 587 aa3.88□□□□□ -1.79
ECM21YBL101C RPS24AP0CX31 135 aaKnown RBP3.88□□□□□ -1.79
ECM21YBL101C RPS24BP0CX32 135 aaKnown RBP3.88□□□□□ -1.79
ECM21YBL101C DOT5P40553 215 aa3.88□□□□□ -1.79
ECM21YBL101C RTF1P53064 558 aa3.88□□□□□ -1.79
ECM21YBL101C NST1P53935 1240 aa3.88□□□□□ -1.79
ECM21YBL101C INP54Q08227 384 aaKnown RBP3.88□□□□□ -1.79
ECM21YBL101C CSE4P36012 229 aa3.87□□□□□ -1.79
ECM21YBL101C YJR008WP47085 338 aa3.87□□□□□ -1.79
ECM21YBL101C NPR2P39923 615 aa3.86□□□□□ -1.79
ECM21YBL101C HIM1Q06674 414 aa3.86□□□□□ -1.79
ECM21YBL101C ISW2Q08773 1120 aa3.86□□□□□ -1.79
ECM21YBL101C TRK1P12685 1235 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms