RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	ALD4	P46367	519 aa	Known RBP	4.84	□□□□□ -1.63
SWH1	YAR042W	KIP3	P53086	805 aa	Known RBP	4.84	□□□□□ -1.63
SWH1	YAR042W	URN1	Q06525	465 aa	Known RBP	4.84	□□□□□ -1.64
SWH1	YAR042W	EAF7	P53911	425 aa	Known RBP	4.83	□□□□□ -1.64
SWH1	YAR042W	FKH1	P40466	484 aa		4.83	□□□□□ -1.64
SWH1	YAR042W	SPE2	P21182	396 aa		4.82	□□□□□ -1.64
SWH1	YAR042W	MNN4	P36044	1178 aa		4.81	□□□□□ -1.64
SWH1	YAR042W	USO1	P25386	1790 aa		4.81	□□□□□ -1.64
SWH1	YAR042W	APC1	P53886	1748 aa		4.81	□□□□□ -1.64
SWH1	YAR042W	YIL177C	P40434	1758 aa		4.8	□□□□□ -1.64
SWH1	YAR042W	YJL225C	P40889	1758 aa		4.8	□□□□□ -1.64
SWH1	YAR042W	PSK1	P31374	1356 aa		4.8	□□□□□ -1.64
SWH1	YAR042W	YEF3	P16521	1044 aa	Known RBP	4.8	□□□□□ -1.64
SWH1	YAR042W	OPY1	P38271	328 aa		4.8	□□□□□ -1.64
SWH1	YAR042W	SCT1	P32784	759 aa		4.79	□□□□□ -1.64
SWH1	YAR042W	TY4B-H	P0C2J7	1802 aa		4.79	□□□□□ -1.64
SWH1	YAR042W	TY4B-J	P47024	1803 aa		4.79	□□□□□ -1.64
SWH1	YAR042W	RPP0	P05317	312 aa	Known RBP	4.79	□□□□□ -1.64
SWH1	YAR042W	FPR3	P38911	411 aa	Known RBP	4.79	□□□□□ -1.64
SWH1	YAR042W	TAF8	Q03750	510 aa		4.79	□□□□□ -1.64
SWH1	YAR042W	RTG3	P38165	486 aa		4.78	□□□□□ -1.64
SWH1	YAR042W	CAB1	Q04430	367 aa		4.77	□□□□□ -1.65
SWH1	YAR042W	LEO1	P38439	464 aa		4.76	□□□□□ -1.65
SWH1	YAR042W	TCB2	P48231	1178 aa		4.76	□□□□□ -1.65
SWH1	YAR042W	TRK1	P12685	1235 aa		4.75	□□□□□ -1.65
SWH1	YAR042W	CHZ1	P40019	153 aa	Predicted RBP	4.75	□□□□□ -1.65
SWH1	YAR042W	RRP5	Q05022	1729 aa	Known RBP	4.75	□□□□□ -1.65
SWH1	YAR042W	KRE5	P22023	1365 aa		4.75	□□□□□ -1.65
SWH1	YAR042W	AUS1	Q08409	1394 aa		4.75	□□□□□ -1.65
SWH1	YAR042W	YRF1-2	P40105	1681 aa		4.74	□□□□□ -1.65
SWH1	YAR042W	RRP46	P53256	223 aa	Predicted RBP	4.73	□□□□□ -1.65
SWH1	YAR042W	PPH3	P32345	308 aa		4.73	□□□□□ -1.65
SWH1	YAR042W	RVB2	Q12464	471 aa	Known RBP	4.73	□□□□□ -1.65
SWH1	YAR042W	ADE6	P38972	1358 aa	Known RBP	4.73	□□□□□ -1.65
SWH1	YAR042W	SNF7	P39929	240 aa	Known RBP	4.73	□□□□□ -1.65
SWH1	YAR042W	CDC45	Q08032	650 aa		4.72	□□□□□ -1.65
SWH1	YAR042W	URB1	P34241	1764 aa	Known RBP	4.72	□□□□□ -1.65
SWH1	YAR042W	VPS27	P40343	622 aa	Known RBP	4.72	□□□□□ -1.65
SWH1	YAR042W	MAK10	Q02197	733 aa		4.72	□□□□□ -1.65
SWH1	YAR042W	PRP43	P53131	767 aa	Known RBP	4.71	□□□□□ -1.65
SWH1	YAR042W	TAP42	Q04372	366 aa		4.71	□□□□□ -1.65
SWH1	YAR042W	CPS1	P27614	576 aa		4.71	□□□□□ -1.66
SWH1	YAR042W	FKS3	Q04952	1785 aa		4.71	□□□□□ -1.66
SWH1	YAR042W	SIS2	P36024	562 aa		4.71	□□□□□ -1.66
SWH1	YAR042W	DJP1	P40564	432 aa		4.7	□□□□□ -1.66
SWH1	YAR042W	SUI2	P20459	304 aa	Known RBP	4.69	□□□□□ -1.66
SWH1	YAR042W	YRB30	P53107	440 aa	Predicted RBP	4.69	□□□□□ -1.66
SWH1	YAR042W	AIM44	Q99299	758 aa		4.69	□□□□□ -1.66
SWH1	YAR042W	ROX1	P25042	368 aa		4.69	□□□□□ -1.66
SWH1	YAR042W	NAP1	P25293	417 aa	Known RBP	4.69	□□□□□ -1.66
SWH1	YAR042W	YNR029C	P53729	429 aa	Known RBP	4.69	□□□□□ -1.66
SWH1	YAR042W	RCM1	P53972	490 aa		4.69	□□□□□ -1.66
SWH1	YAR042W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
SWH1	YAR042W	YRF1-4	O13559	1382 aa		4.68	□□□□□ -1.66
SWH1	YAR042W	YDL144C	Q07589	356 aa		4.68	□□□□□ -1.66
SWH1	YAR042W	SIR4	P11978	1358 aa		4.67	□□□□□ -1.66
SWH1	YAR042W	RIA1	P53893	1110 aa		4.67	□□□□□ -1.66
SWH1	YAR042W	HEF3	P53978	1044 aa	Known RBP	4.67	□□□□□ -1.66
SWH1	YAR042W	MRX12	P47084	519 aa		4.66	□□□□□ -1.66
SWH1	YAR042W	ABP1	P15891	592 aa	Known RBP	4.66	□□□□□ -1.66
SWH1	YAR042W	YIR014W	P40570	242 aa		4.66	□□□□□ -1.66
SWH1	YAR042W	HIM1	Q06674	414 aa		4.66	□□□□□ -1.66
SWH1	YAR042W	LEU2	P04173	364 aa	Predicted RBP	4.66	□□□□□ -1.66
SWH1	YAR042W	SLN1	P39928	1220 aa	Predicted RBP	4.66	□□□□□ -1.66
SWH1	YAR042W	MTR4	P47047	1073 aa	Known RBP	4.66	□□□□□ -1.66
SWH1	YAR042W	PCT1	P13259	424 aa		4.65	□□□□□ -1.66
SWH1	YAR042W	THI22	Q06490	572 aa		4.65	□□□□□ -1.66
SWH1	YAR042W	RPO41	P13433	1351 aa	Known RBP	4.65	□□□□□ -1.66
SWH1	YAR042W	PRD1	P25375	712 aa		4.65	□□□□□ -1.66
SWH1	YAR042W	SAP155	P43612	1002 aa		4.65	□□□□□ -1.66
SWH1	YAR042W	MPP10	P47083	593 aa	Known RBP	4.64	□□□□□ -1.67
SWH1	YAR042W	GRX4	P32642	244 aa		4.64	□□□□□ -1.67
SWH1	YAR042W	YRF1-3	P0CX14	1859 aa		4.64	□□□□□ -1.67
SWH1	YAR042W	YRF1-7	P0CX15	1859 aa		4.64	□□□□□ -1.67
SWH1	YAR042W	YRF1-6	P53819	1859 aa		4.64	□□□□□ -1.67
SWH1	YAR042W	PDI1	P17967	522 aa	Known RBP	4.63	□□□□□ -1.67
SWH1	YAR042W	VPS24	P36095	224 aa	Known RBP	4.63	□□□□□ -1.67
SWH1	YAR042W	ARL1	P38116	183 aa	Known RBP	4.62	□□□□□ -1.67
SWH1	YAR042W	CTR9	P89105	1077 aa		4.62	□□□□□ -1.67
SWH1	YAR042W	QCR6	P00127	147 aa		4.61	□□□□□ -1.67
SWH1	YAR042W	RTR1	P40084	226 aa	Predicted RBP	4.61	□□□□□ -1.67
SWH1	YAR042W	YIL092W	P40497	633 aa		4.61	□□□□□ -1.67
SWH1	YAR042W	YPP1	P46951	817 aa		4.61	□□□□□ -1.67
SWH1	YAR042W	RAD2	P07276	1031 aa		4.61	□□□□□ -1.67
SWH1	YAR042W	KAR2	P16474	682 aa	Known RBP	4.61	□□□□□ -1.67
SWH1	YAR042W	MSP1	P28737	362 aa		4.61	□□□□□ -1.67
SWH1	YAR042W	RLF2	Q12495	606 aa		4.6	□□□□□ -1.67
SWH1	YAR042W	DAL5	P15365	543 aa		4.6	□□□□□ -1.67
SWH1	YAR042W	AVT3	P36062	692 aa		4.6	□□□□□ -1.67
SWH1	YAR042W	RTT109	Q07794	436 aa		4.6	□□□□□ -1.67
SWH1	YAR042W	YMR196W	Q04336	1088 aa		4.6	□□□□□ -1.67
SWH1	YAR042W	MIF2	P35201	549 aa		4.59	□□□□□ -1.67
SWH1	YAR042W	RPS24A	P0CX31	135 aa	Known RBP	4.59	□□□□□ -1.67
SWH1	YAR042W	RPS24B	P0CX32	135 aa	Known RBP	4.59	□□□□□ -1.67
SWH1	YAR042W	RTF1	P53064	558 aa		4.59	□□□□□ -1.67
SWH1	YAR042W	NOP58	Q12499	511 aa	Known RBP	4.59	□□□□□ -1.67
SWH1	YAR042W	NOT3	P06102	836 aa	Known RBP	4.58	□□□□□ -1.68
SWH1	YAR042W	TPD3	P31383	635 aa		4.58	□□□□□ -1.68
SWH1	YAR042W	KNS1	P32350	737 aa	Predicted RBP	4.58	□□□□□ -1.68
SWH1	YAR042W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms