RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C YRF1-2P40105 1681 aa2.75□□□□□ -1.97
YAR009CYAR009C ABP1P15891 592 aaKnown RBP2.75□□□□□ -1.97
YAR009CYAR009C GUT1P32190 709 aa2.75□□□□□ -1.97
YAR009CYAR009C NUP170P38181 1502 aa2.74□□□□□ -1.97
YAR009CYAR009C CKB1P43639 278 aa2.74□□□□□ -1.97
YAR009CYAR009C BUD3P25558 1636 aa2.74□□□□□ -1.97
YAR009CYAR009C SPP1Q03012 353 aa2.74□□□□□ -1.97
YAR009CYAR009C EAP1P36041 632 aaKnown RBP2.74□□□□□ -1.97
YAR009CYAR009C DCW1P36091 449 aa2.73□□□□□ -1.97
YAR009CYAR009C GEA2P39993 1459 aaKnown RBP2.73□□□□□ -1.97
YAR009CYAR009C HTA1P04911 132 aaKnown RBP2.73□□□□□ -1.97
YAR009CYAR009C HTA2P04912 132 aa2.73□□□□□ -1.97
YAR009CYAR009C TY1B-NL2Q99337 1749 aaKnown RBP2.73□□□□□ -1.97
YAR009CYAR009C TIF11P38912 153 aaKnown RBP2.72□□□□□ -1.97
YAR009CYAR009C MYO4P32492 1471 aa2.72□□□□□ -1.97
YAR009CYAR009C ULI1P43604 169 aa2.72□□□□□ -1.97
YAR009CYAR009C SPB4P25808 606 aaPredicted RBP2.71□□□□□ -1.97
YAR009CYAR009C YBT1P32386 1661 aa2.71□□□□□ -1.98
YAR009CYAR009C VTH1P40438 1549 aa2.71□□□□□ -1.98
YAR009CYAR009C VTH2P40890 1549 aa2.71□□□□□ -1.98
YAR009CYAR009C TRP5P00931 707 aaKnown RBP2.71□□□□□ -1.98
YAR009CYAR009C REF2P42073 533 aaPredicted RBP2.71□□□□□ -1.98
YAR009CYAR009C UFD4P33202 1483 aa2.71□□□□□ -1.98
YAR009CYAR009C MMS22Q06164 1454 aa2.7□□□□□ -1.98
YAR009CYAR009C YEL023CP39992 682 aa2.7□□□□□ -1.98
YAR009CYAR009C YGR273CP53329 174 aa2.7□□□□□ -1.98
YAR009CYAR009C PBS2P08018 668 aa2.69□□□□□ -1.98
YAR009CYAR009C PTC4P38089 393 aa2.69□□□□□ -1.98
YAR009CYAR009C JIP4Q03361 876 aa2.69□□□□□ -1.98
YAR009CYAR009C IOC2Q12072 812 aa2.69□□□□□ -1.98
YAR009CYAR009C SOL3P38858 249 aa2.69□□□□□ -1.98
YAR009CYAR009C VHR2P40041 505 aa2.69□□□□□ -1.98
YAR009CYAR009C NUP188P52593 1655 aaKnown RBP2.68□□□□□ -1.98
YAR009CYAR009C LDB19Q12502 818 aa2.68□□□□□ -1.98
YAR009CYAR009C UBP14P38237 781 aaKnown RBP2.68□□□□□ -1.98
YAR009CYAR009C MAK21Q12176 1025 aaKnown RBP2.68□□□□□ -1.98
YAR009CYAR009C YNL035CP53962 389 aaKnown RBP2.67□□□□□ -1.98
YAR009CYAR009C DSF2P38213 736 aa2.67□□□□□ -1.98
YAR009CYAR009C AI4P03878 556 aa2.67□□□□□ -1.98
YAR009CYAR009C LEU3P08638 886 aa2.67□□□□□ -1.98
YAR009CYAR009C KEX1P09620 729 aa2.67□□□□□ -1.98
YAR009CYAR009C MPH3P0CE00 602 aa2.67□□□□□ -1.98
YAR009CYAR009C KIC1P38692 1080 aa2.67□□□□□ -1.98
YAR009CYAR009C NST1P53935 1240 aa2.67□□□□□ -1.98
YAR009CYAR009C YLR326WQ06170 240 aaKnown RBP2.67□□□□□ -1.98
YAR009CYAR009C TRM732Q03496 1420 aa2.66□□□□□ -1.98
YAR009CYAR009C COX6P00427 148 aa2.66□□□□□ -1.98
YAR009CYAR009C RTG1P32607 177 aa2.66□□□□□ -1.98
YAR009CYAR009C TFG1P41895 735 aaPredicted RBP2.66□□□□□ -1.98
YAR009CYAR009C DAN4P47179 1161 aa2.66□□□□□ -1.98
YAR009CYAR009C MAM3Q12296 706 aa2.66□□□□□ -1.98
YAR009CYAR009C RAD54P32863 898 aa2.66□□□□□ -1.98
YAR009CYAR009C SEC61P32915 480 aa2.66□□□□□ -1.98
YAR009CYAR009C VMR1P38735 1592 aa2.66□□□□□ -1.98
YAR009CYAR009C STU1P38198 1513 aa2.65□□□□□ -1.98
YAR009CYAR009C YDR090CQ03193 310 aa2.65□□□□□ -1.98
YAR009CYAR009C NCR1Q12200 1170 aa2.65□□□□□ -1.99
YAR009CYAR009C PCS60P38137 543 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
YAR009CYAR009C ILV3P39522 585 aaKnown RBP2.64□□□□□ -1.99
YAR009CYAR009C IES2P40154 320 aa2.64□□□□□ -1.99
YAR009CYAR009C PML39Q03760 334 aa2.64□□□□□ -1.99
YAR009CYAR009C NUP159P40477 1460 aa2.63□□□□□ -1.99
YAR009CYAR009C FKH1P40466 484 aa2.63□□□□□ -1.99
YAR009CYAR009C SLI15P38283 698 aa2.63□□□□□ -1.99
YAR009CYAR009C RPP1BP10622 106 aaKnown RBP2.62□□□□□ -1.99
YAR009CYAR009C IQG1Q12280 1495 aa2.62□□□□□ -1.99
YAR009CYAR009C LEO1P38439 464 aa2.62□□□□□ -1.99
YAR009CYAR009C YDL129WQ07555 291 aa2.62□□□□□ -1.99
YAR009CYAR009C RPN1P38764 993 aaKnown RBP2.62□□□□□ -1.99
YAR009CYAR009C MID1P41821 548 aa2.62□□□□□ -1.99
YAR009CYAR009C YJL171CP46992 396 aa2.62□□□□□ -1.99
YAR009CYAR009C AIR2Q12476 344 aaKnown RBP2.62□□□□□ -1.99
YAR009CYAR009C NUP42P49686 430 aaKnown RBP2.61□□□□□ -1.99
YAR009CYAR009C USO1P25386 1790 aa2.61□□□□□ -1.99
YAR009CYAR009C DIT2P21595 489 aa2.61□□□□□ -1.99
YAR009CYAR009C PEX29Q03370 554 aa2.61□□□□□ -1.99
YAR009CYAR009C SAP30P38429 201 aa2.61□□□□□ -1.99
YAR009CYAR009C YNR021WP53723 404 aaKnown RBP2.61□□□□□ -1.99
YAR009CYAR009C IML1P47170 1584 aa2.6□□□□□ -1.99
YAR009CYAR009C DPL1Q05567 589 aa2.6□□□□□ -1.99
YAR009CYAR009C CDC73Q06697 393 aa2.6□□□□□ -1.99
YAR009CYAR009C MPC54Q08550 464 aa2.6□□□□□ -1.99
YAR009CYAR009C PSE1P32337 1089 aaKnown RBP2.59□□□□□ -1.99
YAR009CYAR009C ORC6P38826 435 aa2.59□□□□□ -1.99
YAR009CYAR009C ATF2P53296 535 aa2.59□□□□□ -1.99
YAR009CYAR009C BMT6Q12291 365 aa2.59□□□□□ -1.99
YAR009CYAR009C CSC1Q06538 782 aa2.59□□□□□ -1.99
YAR009CYAR009C TSC11P40061 1430 aa2.59□□□□□ -2
YAR009CYAR009C GLC3P32775 704 aa2.59□□□□□ -2
YAR009CYAR009C PEX21P50091 288 aa2.59□□□□□ -2
YAR009CYAR009C PDR5P33302 1511 aaKnown RBP2.59□□□□□ -2
YAR009CYAR009C SPP41P38904 1435 aa2.58□□□□□ -2
YAR009CYAR009C SEC7P11075 2009 aaKnown RBP2.58□□□□□ -2
YAR009CYAR009C NMA111P53920 997 aa2.58□□□□□ -2
YAR009CYAR009C RGR1P19263 1082 aa2.57□□□□□ -2
YAR009CYAR009C MVP1P40959 511 aaKnown RBP2.57□□□□□ -2
YAR009CYAR009C AIM7Q12156 149 aa2.57□□□□□ -2
YAR009CYAR009C TFB4Q12004 338 aa2.57□□□□□ -2
YAR009CYAR009C ISU2Q12056 156 aa2.57□□□□□ -2
YAR009CYAR009C GAP1P19145 602 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms