RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
SCARB2-227ENST00000640957 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
SCARB2-227ENST00000640957 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
SCARB2-227ENST00000640957 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-227ENST00000640957 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-227ENST00000640957 GSE1Q14687 1217 aa18.31■□□□□ 0.52
SCARB2-227ENST00000640957 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
SCARB2-227ENST00000640957 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
SCARB2-227ENST00000640957 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
SCARB2-227ENST00000640957 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-227ENST00000640957 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
SCARB2-227ENST00000640957 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
SCARB2-227ENST00000640957 BACH2Q9BYV9 841 aa18.29■□□□□ 0.52
SCARB2-227ENST00000640957 NAIPQ13075 1403 aa18.27■□□□□ 0.52
SCARB2-227ENST00000640957 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
SCARB2-227ENST00000640957 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
SCARB2-227ENST00000640957 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
SCARB2-227ENST00000640957 UBE2Q2Q8WVN8 375 aa18.26■□□□□ 0.51
SCARB2-227ENST00000640957 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-227ENST00000640957 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
SCARB2-227ENST00000640957 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
SCARB2-227ENST00000640957 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
SCARB2-227ENST00000640957 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
SCARB2-227ENST00000640957 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
SCARB2-227ENST00000640957 RGS3P49796 1198 aa18.23■□□□□ 0.51
SCARB2-227ENST00000640957 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
SCARB2-227ENST00000640957 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
SCARB2-227ENST00000640957 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
SCARB2-227ENST00000640957 HFM1A2PYH4 1435 aa18.21■□□□□ 0.51
SCARB2-227ENST00000640957 NCOA1Q15788 1441 aa18.21■□□□□ 0.51
SCARB2-227ENST00000640957 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 CRBNQ96SW2 442 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 WASHC2CQ9Y4E1 1318 aa18.2■□□□□ 0.5
SCARB2-227ENST00000640957 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
SCARB2-227ENST00000640957 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
SCARB2-227ENST00000640957 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
SCARB2-227ENST00000640957 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
SCARB2-227ENST00000640957 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
SCARB2-227ENST00000640957 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
SCARB2-227ENST00000640957 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-227ENST00000640957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCARB2-227ENST00000640957 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
SCARB2-227ENST00000640957 DENND4BO75064 1496 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-227ENST00000640957 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-227ENST00000640957 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
SCARB2-227ENST00000640957 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
SCARB2-227ENST00000640957 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
SCARB2-227ENST00000640957 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
SCARB2-227ENST00000640957 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
SCARB2-227ENST00000640957 POGKQ9P215 609 aa18.08■□□□□ 0.49
SCARB2-227ENST00000640957 KDM6BO15054 1643 aa18.08■□□□□ 0.48
SCARB2-227ENST00000640957 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
SCARB2-227ENST00000640957 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
SCARB2-227ENST00000640957 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
SCARB2-227ENST00000640957 USP47Q96K76 1375 aa18.06■□□□□ 0.48
SCARB2-227ENST00000640957 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
SCARB2-227ENST00000640957 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
SCARB2-227ENST00000640957 PKD2Q13563 968 aa18.05■□□□□ 0.48
SCARB2-227ENST00000640957 GZF1Q9H116 711 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-227ENST00000640957 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
SCARB2-227ENST00000640957 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.47
SCARB2-227ENST00000640957 RRAGDQ9NQL2 400 aaPredicted RBP18.01■□□□□ 0.47
SCARB2-227ENST00000640957 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
SCARB2-227ENST00000640957 MS4A1P11836 297 aa18■□□□□ 0.47
SCARB2-227ENST00000640957 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
SCARB2-227ENST00000640957 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
SCARB2-227ENST00000640957 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-227ENST00000640957 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
SCARB2-227ENST00000640957 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
SCARB2-227ENST00000640957 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
SCARB2-227ENST00000640957 PKNOX2Q96KN3 472 aa17.98■□□□□ 0.47
SCARB2-227ENST00000640957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCARB2-227ENST00000640957 ANKRD30BQ9BXX2 1392 aa17.97■□□□□ 0.47
SCARB2-227ENST00000640957 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
SCARB2-227ENST00000640957 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
SCARB2-227ENST00000640957 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
SCARB2-227ENST00000640957 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-227ENST00000640957 PRG4Q92954 1404 aaPredicted RBP17.95■□□□□ 0.46
SCARB2-227ENST00000640957 MYBBP1AQ9BQG0 1328 aaKnown RBP17.94■□□□□ 0.46
SCARB2-227ENST00000640957 C8orf34Q49A92 452 aa17.94■□□□□ 0.46
SCARB2-227ENST00000640957 RSPH6AQ9H0K4 717 aa17.93■□□□□ 0.46
SCARB2-227ENST00000640957 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
SCARB2-227ENST00000640957 SEC24BO95487 1268 aa17.92■□□□□ 0.46
SCARB2-227ENST00000640957 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
SCARB2-227ENST00000640957 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
SCARB2-227ENST00000640957 CUL7Q14999 1698 aa17.91■□□□□ 0.46
SCARB2-227ENST00000640957 GRIN2BQ13224 1484 aa17.91■□□□□ 0.46
SCARB2-227ENST00000640957 MAGI3Q5TCQ9 1506 aa17.91■□□□□ 0.46
SCARB2-227ENST00000640957 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
SCARB2-227ENST00000640957 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
SCARB2-227ENST00000640957 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.45
SCARB2-227ENST00000640957 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SCARB2-227ENST00000640957 NUP155O75694 1391 aa17.89■□□□□ 0.45
SCARB2-227ENST00000640957 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
SCARB2-227ENST00000640957 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
SCARB2-227ENST00000640957 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms