RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 HSP90AA1P07900 732 aaKnown RBP11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 CARMIL2Q6F5E8 1435 aa11.01□□□□□ -0.65
HNRNPU-222ENST00000639880 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
HNRNPU-222ENST00000639880 RCAN3Q9UKA8 241 aa11□□□□□ -0.65
HNRNPU-222ENST00000639880 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
HNRNPU-222ENST00000639880 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
HNRNPU-222ENST00000639880 CASKIN1Q8WXD9 1431 aa10.99□□□□□ -0.65
HNRNPU-222ENST00000639880 KTN1Q86UP2 1357 aaKnown RBP10.99□□□□□ -0.65
HNRNPU-222ENST00000639880 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
HNRNPU-222ENST00000639880 NCOA2Q15596 1464 aa10.98□□□□□ -0.65
HNRNPU-222ENST00000639880 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
HNRNPU-222ENST00000639880 RALBP1Q15311 655 aa10.98□□□□□ -0.65
HNRNPU-222ENST00000639880 WDR97A6NE52 1622 aa10.97□□□□□ -0.65
HNRNPU-222ENST00000639880 NESP48681 1621 aa10.97□□□□□ -0.65
HNRNPU-222ENST00000639880 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
HNRNPU-222ENST00000639880 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.66
HNRNPU-222ENST00000639880 KIF7Q2M1P5 1343 aa10.96□□□□□ -0.66
HNRNPU-222ENST00000639880 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.66
HNRNPU-222ENST00000639880 USP47Q96K76 1375 aa10.96□□□□□ -0.66
HNRNPU-222ENST00000639880 DEKP35659 375 aaKnown RBP10.95□□□□□ -0.66
HNRNPU-222ENST00000639880 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.661e-7■■■■□ 25.3
HNRNPU-222ENST00000639880 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
HNRNPU-222ENST00000639880 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
HNRNPU-222ENST00000639880 CCDC7Q96M83 1385 aa10.94□□□□□ -0.66
HNRNPU-222ENST00000639880 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
HNRNPU-222ENST00000639880 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
HNRNPU-222ENST00000639880 SAFB2Q14151 953 aaKnown RBP eCLIP10.92□□□□□ -0.66
HNRNPU-222ENST00000639880 CCDC184Q52MB2 194 aa10.92□□□□□ -0.66
HNRNPU-222ENST00000639880 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
HNRNPU-222ENST00000639880 FTSJ3Q8IY81 847 aaKnown RBP10.91□□□□□ -0.66
HNRNPU-222ENST00000639880 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
HNRNPU-222ENST00000639880 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
HNRNPU-222ENST00000639880 POLA1P09884 1462 aaPredicted RBP10.91□□□□□ -0.66
HNRNPU-222ENST00000639880 PLIN1O60240 522 aa10.91□□□□□ -0.66
HNRNPU-222ENST00000639880 MYBBP1AQ9BQG0 1328 aaKnown RBP10.9□□□□□ -0.66
HNRNPU-222ENST00000639880 BECN1Q14457 450 aa10.9□□□□□ -0.66
HNRNPU-222ENST00000639880 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
HNRNPU-222ENST00000639880 GGT6Q6P531 493 aa10.9□□□□□ -0.66
HNRNPU-222ENST00000639880 PANK3Q9H999 370 aa10.9□□□□□ -0.66
HNRNPU-222ENST00000639880 KIF15Q9NS87 1388 aa10.9□□□□□ -0.67
HNRNPU-222ENST00000639880 UNC13AQ9UPW8 1703 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 CCDC146Q8IYE0 955 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 EXOC6Q8TAG9 804 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 MORC1Q86VD1 984 aa10.89□□□□□ -0.67
HNRNPU-222ENST00000639880 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
HNRNPU-222ENST00000639880 TCERG1O14776 1098 aaKnown RBP10.88□□□□□ -0.67
HNRNPU-222ENST00000639880 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
HNRNPU-222ENST00000639880 KIF3BO15066 747 aa10.88□□□□□ -0.67
HNRNPU-222ENST00000639880 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
HNRNPU-222ENST00000639880 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
HNRNPU-222ENST00000639880 POGKQ9P215 609 aa10.87□□□□□ -0.67
HNRNPU-222ENST00000639880 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
HNRNPU-222ENST00000639880 KANK1Q14678 1352 aa10.87□□□□□ -0.67
HNRNPU-222ENST00000639880 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
HNRNPU-222ENST00000639880 NAIPQ13075 1403 aa10.86□□□□□ -0.67
HNRNPU-222ENST00000639880 PDE3BQ13370 1112 aa10.85□□□□□ -0.67
HNRNPU-222ENST00000639880 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
HNRNPU-222ENST00000639880 EFCAB5A4FU69 1503 aa10.85□□□□□ -0.67
HNRNPU-222ENST00000639880 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
HNRNPU-222ENST00000639880 STK26Q9P289 416 aa10.85□□□□□ -0.67
HNRNPU-222ENST00000639880 RRP1P56182 461 aaKnown RBP10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 MYH16Q9H6N6 1097 aa10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
HNRNPU-222ENST00000639880 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 FANCIQ9NVI1 1328 aa10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 ANP32BQ92688 251 aaKnown RBP10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 ANKRD50Q9ULJ7 1429 aa10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 PTPRGP23470 1445 aa10.83□□□□□ -0.68
HNRNPU-222ENST00000639880 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
HNRNPU-222ENST00000639880 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
HNRNPU-222ENST00000639880 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
HNRNPU-222ENST00000639880 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.682e-8■■■□□ 17.8
HNRNPU-222ENST00000639880 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
HNRNPU-222ENST00000639880 PDE4AP27815 886 aa10.81□□□□□ -0.68
HNRNPU-222ENST00000639880 CLUAP1Q96AJ1 413 aa10.81□□□□□ -0.68
HNRNPU-222ENST00000639880 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
HNRNPU-222ENST00000639880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
HNRNPU-222ENST00000639880 TRAK1Q9UPV9 953 aa10.8□□□□□ -0.68
HNRNPU-222ENST00000639880 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
HNRNPU-222ENST00000639880 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 PRG4Q92954 1404 aaPredicted RBP10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 SLC4A3P48751 1232 aa10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 EHBP1L1Q8N3D4 1523 aa10.79□□□□□ -0.68
HNRNPU-222ENST00000639880 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 CDK13Q14004 1512 aaKnown RBP10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 ABCA10Q8WWZ4 1543 aa10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 SLKQ9H2G2 1235 aaPredicted RBP10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 APAF1O14727 1248 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms